RNA–Protein interactions for RNA: ENST00000488155.1

NIPAL3-207, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best)

Gene NIPAL3, Length 931 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-207ENST00000488155 TGM7Q96PF1 710 aa11.12□□□□□ -0.63
NIPAL3-207ENST00000488155 VPS35Q96QK1 796 aa11.12□□□□□ -0.63
NIPAL3-207ENST00000488155 PANX2Q96RD6 677 aa11.12□□□□□ -0.63
NIPAL3-207ENST00000488155 SRPK1Q96SB4 655 aaKnown RBP11.12□□□□□ -0.63
NIPAL3-207ENST00000488155 VAT1Q99536 393 aa11.12□□□□□ -0.63
NIPAL3-207ENST00000488155 TIMM29Q9BSF4 260 aa11.12□□□□□ -0.63
NIPAL3-207ENST00000488155 OSBPL8Q9BZF1 889 aa11.12□□□□□ -0.63
NIPAL3-207ENST00000488155 LACRTQ9GZZ8 138 aa11.12□□□□□ -0.63
NIPAL3-207ENST00000488155 TRABDQ9H4I3 376 aa11.12□□□□□ -0.63
NIPAL3-207ENST00000488155 PDP2Q9P2J9 529 aa11.12□□□□□ -0.63
NIPAL3-207ENST00000488155 FAM8A1Q9UBU6 413 aa11.12□□□□□ -0.63
NIPAL3-207ENST00000488155 PSMD13Q9UNM6 376 aa11.12□□□□□ -0.63
NIPAL3-207ENST00000488155 WDR37Q9Y2I8 494 aa11.12□□□□□ -0.63
NIPAL3-207ENST00000488155 REXO2Q9Y3B8 237 aaKnown RBP11.12□□□□□ -0.63
NIPAL3-207ENST00000488155 PCDHGA3Q9Y5H0 932 aa11.12□□□□□ -0.63
NIPAL3-207ENST00000488155 ARL5AQ9Y689 179 aa11.12□□□□□ -0.63
NIPAL3-207ENST00000488155 PCM1Q15154 2024 aa11.12□□□□□ -0.63
NIPAL3-207ENST00000488155 TNRC6AQ8NDV7 1962 aaKnown RBP11.12□□□□□ -0.63
NIPAL3-207ENST00000488155 ANKRD12Q6UB98 2062 aa11.12□□□□□ -0.63
NIPAL3-207ENST00000488155 TLN1Q9Y490 2541 aaKnown RBP11.11□□□□□ -0.63
NIPAL3-207ENST00000488155 NBASA2RRP1 2371 aa11.11□□□□□ -0.63
NIPAL3-207ENST00000488155 GLYATL1P3A0A0U1RQE8 302 aa11.11□□□□□ -0.63
NIPAL3-207ENST00000488155 OR2AG2A6NM03 316 aa11.11□□□□□ -0.63
NIPAL3-207ENST00000488155 B4E171 279 aa11.11□□□□□ -0.63
NIPAL3-207ENST00000488155 GPR89AB7ZAQ6 455 aa11.11□□□□□ -0.63
NIPAL3-207ENST00000488155 STX7O15400 261 aaKnown RBP11.11□□□□□ -0.63
NIPAL3-207ENST00000488155 KCNN4O15554 427 aa11.11□□□□□ -0.63
NIPAL3-207ENST00000488155 RAD1O60671 282 aa11.11□□□□□ -0.63
NIPAL3-207ENST00000488155 POP7O75817 140 aaKnown RBP11.11□□□□□ -0.63
NIPAL3-207ENST00000488155 IPO7O95373 1038 aaKnown RBP11.11□□□□□ -0.63
NIPAL3-207ENST00000488155 EPOP01588 193 aa11.11□□□□□ -0.63
NIPAL3-207ENST00000488155 GPR89BP0CG08 455 aa11.11□□□□□ -0.63
NIPAL3-207ENST00000488155 RBP3P10745 1247 aa11.11□□□□□ -0.63
NIPAL3-207ENST00000488155 LIFP15018 202 aa11.11□□□□□ -0.63
NIPAL3-207ENST00000488155 XRCC1P18887 633 aaPredicted RBP11.11□□□□□ -0.63
NIPAL3-207ENST00000488155 HLA-DPA1P20036 260 aa11.11□□□□□ -0.63
NIPAL3-207ENST00000488155 PSMB4P28070 264 aa11.11□□□□□ -0.63
NIPAL3-207ENST00000488155 AKT1P31749 480 aa11.11□□□□□ -0.63
NIPAL3-207ENST00000488155 CTNNA1P35221 906 aaKnown RBP11.11□□□□□ -0.63
NIPAL3-207ENST00000488155 TSPAN7P41732 249 aa11.11□□□□□ -0.63
NIPAL3-207ENST00000488155 LEPRP48357 1165 aaKnown RBP11.11□□□□□ -0.63
NIPAL3-207ENST00000488155 EPHA4P54764 986 aa11.11□□□□□ -0.63
NIPAL3-207ENST00000488155 GEMP55040 296 aa11.11□□□□□ -0.63
NIPAL3-207ENST00000488155 EIF3EP60228 445 aaKnown RBP11.11□□□□□ -0.63
NIPAL3-207ENST00000488155 TMPRSS15P98073 1019 aa11.11□□□□□ -0.63
NIPAL3-207ENST00000488155 FOXM1Q08050 763 aa11.11□□□□□ -0.63
NIPAL3-207ENST00000488155 XRCC4Q13426 336 aa11.11□□□□□ -0.63
NIPAL3-207ENST00000488155 SPARCL1Q14515 664 aa11.11□□□□□ -0.63
NIPAL3-207ENST00000488155 CLCA4Q14CN2 919 aa11.11□□□□□ -0.63
NIPAL3-207ENST00000488155 DARS2Q6PI48 645 aaKnown RBP11.11□□□□□ -0.63
NIPAL3-207ENST00000488155 MICALCLQ6ZW33 695 aa11.11□□□□□ -0.63
NIPAL3-207ENST00000488155 C11orf96Q7Z7L8 435 aa11.11□□□□□ -0.63
NIPAL3-207ENST00000488155 KIAA1328Q86T90 577 aa11.11□□□□□ -0.63
NIPAL3-207ENST00000488155 CACNA2D3Q8IZS8 1091 aa11.11□□□□□ -0.63
NIPAL3-207ENST00000488155 BEND7Q8N7W2 519 aaPredicted RBP11.11□□□□□ -0.63
NIPAL3-207ENST00000488155 RASGEF1AQ8N9B8 481 aa11.11□□□□□ -0.63
NIPAL3-207ENST00000488155 OR4K2Q8NGD2 314 aa11.11□□□□□ -0.63
NIPAL3-207ENST00000488155 CCDC110Q8TBZ0 833 aa11.11□□□□□ -0.63
NIPAL3-207ENST00000488155 CXorf40BQ96DE9 158 aa11.11□□□□□ -0.63
NIPAL3-207ENST00000488155 RTP4Q96DX8 246 aa11.11□□□□□ -0.63
NIPAL3-207ENST00000488155 MED8Q96G25 268 aa11.11□□□□□ -0.63
NIPAL3-207ENST00000488155 GORASP1Q9BQQ3 440 aa11.11□□□□□ -0.63
NIPAL3-207ENST00000488155 DDA1Q9BW61 102 aa11.11□□□□□ -0.63
NIPAL3-207ENST00000488155 GBA3Q9H227 469 aa11.11□□□□□ -0.63
NIPAL3-207ENST00000488155 OGFRQ9NZT2 677 aa11.11□□□□□ -0.63
NIPAL3-207ENST00000488155 HACD3Q9P035 362 aa11.11□□□□□ -0.63
NIPAL3-207ENST00000488155 TRHDEQ9UKU6 1024 aa11.11□□□□□ -0.63
NIPAL3-207ENST00000488155 PACSIN2Q9UNF0 486 aaPredicted RBP11.11□□□□□ -0.63
NIPAL3-207ENST00000488155 PKP3Q9Y446 797 aa11.11□□□□□ -0.63
NIPAL3-207ENST00000488155 KCTD3Q9Y597 815 aa11.11□□□□□ -0.63
NIPAL3-207ENST00000488155 PCDHA3Q9Y5H8 950 aa11.11□□□□□ -0.63
NIPAL3-207ENST00000488155 BSNQ9UPA5 3926 aa11.11□□□□□ -0.63
NIPAL3-207ENST00000488155 CFAP46Q8IYW2 2715 aa11.1□□□□□ -0.63
NIPAL3-207ENST00000488155 A0A0U1RQJ8 604 aa11.1□□□□□ -0.63
NIPAL3-207ENST00000488155 LILRA5A6NI73 299 aa11.1□□□□□ -0.63
NIPAL3-207ENST00000488155 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.1□□□□□ -0.63
NIPAL3-207ENST00000488155 GAPDHSO14556 408 aaPredicted RBP11.1□□□□□ -0.63
NIPAL3-207ENST00000488155 CAPN5O15484 640 aaPredicted RBP11.1□□□□□ -0.63
NIPAL3-207ENST00000488155 PJA2O43164 708 aa11.1□□□□□ -0.63
NIPAL3-207ENST00000488155 KIF1CO43896 1103 aaKnown RBP11.1□□□□□ -0.63
NIPAL3-207ENST00000488155 RASSF9O75901 435 aa11.1□□□□□ -0.63
NIPAL3-207ENST00000488155 UBXN7O94888 489 aa11.1□□□□□ -0.63
NIPAL3-207ENST00000488155 FAM87AP0C7U9 286 aa11.1□□□□□ -0.63
NIPAL3-207ENST00000488155 RWDD2BP57060 319 aa11.1□□□□□ -0.63
NIPAL3-207ENST00000488155 NFKB2Q00653 900 aa11.1□□□□□ -0.63
NIPAL3-207ENST00000488155 MC2RQ01718 297 aa11.1□□□□□ -0.63
NIPAL3-207ENST00000488155 NFATC3Q12968 1075 aa11.1□□□□□ -0.63
NIPAL3-207ENST00000488155 GPR18Q14330 331 aa11.1□□□□□ -0.63
NIPAL3-207ENST00000488155 NFE2L1Q14494 772 aa11.1□□□□□ -0.63
NIPAL3-207ENST00000488155 TBR1Q16650 682 aa11.1□□□□□ -0.63
NIPAL3-207ENST00000488155 ANKRD20A2Q5SQ80 823 aa11.1□□□□□ -0.63
NIPAL3-207ENST00000488155 GPRC6AQ5T6X5 926 aa11.1□□□□□ -0.63
NIPAL3-207ENST00000488155 ANKRD20A1Q5TYW2 823 aa11.1□□□□□ -0.63
NIPAL3-207ENST00000488155 ANKRD20A3Q5VUR7 823 aa11.1□□□□□ -0.63
NIPAL3-207ENST00000488155 ITPRIPL1Q6GPH6 555 aa11.1□□□□□ -0.63
NIPAL3-207ENST00000488155 CEACAM20Q6UY09 585 aa11.1□□□□□ -0.63
NIPAL3-207ENST00000488155 FAM83HQ6ZRV2 1179 aaPredicted RBP11.1□□□□□ -0.63
NIPAL3-207ENST00000488155 FAM92BQ6ZTR7 304 aa11.1□□□□□ -0.63
NIPAL3-207ENST00000488155 AMZ2Q86W34 360 aa11.1□□□□□ -0.63
NIPAL3-207ENST00000488155 GAS2L3Q86XJ1 694 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms