RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 EBF4Q9BQW3 602 aa9.32□□□□□ -0.92
SF3B1-211ENST00000487698 DYRK4Q9NR20 520 aa9.32□□□□□ -0.92
SF3B1-211ENST00000487698 SPATS2LQ9NUQ6 558 aaKnown RBP9.32□□□□□ -0.92
SF3B1-211ENST00000487698 HEY2Q9UBP5 337 aa9.32□□□□□ -0.92
SF3B1-211ENST00000487698 RNF112Q9ULX5 631 aa9.32□□□□□ -0.92
SF3B1-211ENST00000487698 COLQQ9Y215 455 aaPredicted RBP9.32□□□□□ -0.92
SF3B1-211ENST00000487698 SYCE1LA8MT33 242 aa9.31□□□□□ -0.92
SF3B1-211ENST00000487698 ANKRD65E5RJM6 399 aa9.31□□□□□ -0.92
SF3B1-211ENST00000487698 MATN2O00339 956 aa9.31□□□□□ -0.92
SF3B1-211ENST00000487698 HGSO14964 777 aaPredicted RBP9.31□□□□□ -0.92
SF3B1-211ENST00000487698 MBTPS2O43462 519 aa9.31□□□□□ -0.92
SF3B1-211ENST00000487698 MAGEC1O60732 1142 aa9.31□□□□□ -0.92
SF3B1-211ENST00000487698 TRIM16O95361 564 aa9.31□□□□□ -0.92
SF3B1-211ENST00000487698 C6P13671 934 aa9.31□□□□□ -0.92
SF3B1-211ENST00000487698 ATP1B2P14415 290 aaPredicted RBP9.31□□□□□ -0.92
SF3B1-211ENST00000487698 ITGB6P18564 788 aa9.31□□□□□ -0.92
SF3B1-211ENST00000487698 WASP42768 502 aa9.31□□□□□ -0.92
SF3B1-211ENST00000487698 RPL14P50914 215 aaKnown RBP9.31□□□□□ -0.92
SF3B1-211ENST00000487698 HK3P52790 923 aa9.31□□□□□ -0.92
SF3B1-211ENST00000487698 CORO7P57737 925 aa9.31□□□□□ -0.92
SF3B1-211ENST00000487698 SATB1Q01826 763 aa9.31□□□□□ -0.92
SF3B1-211ENST00000487698 CST6Q15828 149 aa9.31□□□□□ -0.92
SF3B1-211ENST00000487698 UNC50Q53HI1 259 aa9.31□□□□□ -0.92
SF3B1-211ENST00000487698 TMEM196Q5HYL7 178 aa9.31□□□□□ -0.92
SF3B1-211ENST00000487698 CFAP157Q5JU67 520 aa9.31□□□□□ -0.92
SF3B1-211ENST00000487698 FAM91A1Q658Y4 838 aa9.31□□□□□ -0.92
SF3B1-211ENST00000487698 SBSNQ6UWP8 590 aa9.31□□□□□ -0.92
SF3B1-211ENST00000487698 ADAMTSL2Q86TH1 951 aa9.31□□□□□ -0.92
SF3B1-211ENST00000487698 MTDHQ86UE4 582 aaKnown RBP9.31□□□□□ -0.92
SF3B1-211ENST00000487698 RALGPS2Q86X27 583 aaPredicted RBP9.31□□□□□ -0.92
SF3B1-211ENST00000487698 AADATQ8N5Z0 425 aa9.31□□□□□ -0.92
SF3B1-211ENST00000487698 BTN2A2Q8WVV5 523 aa9.31□□□□□ -0.92
SF3B1-211ENST00000487698 STON2Q8WXE9 905 aa9.31□□□□□ -0.92
SF3B1-211ENST00000487698 DNASE1L2Q92874 299 aa9.31□□□□□ -0.92
SF3B1-211ENST00000487698 EXT2Q93063 718 aa9.31□□□□□ -0.92
SF3B1-211ENST00000487698 GLYATL1Q969I3 302 aa9.31□□□□□ -0.92
SF3B1-211ENST00000487698 AP2M1Q96CW1 435 aa9.31□□□□□ -0.92
SF3B1-211ENST00000487698 PANX3Q96QZ0 392 aa9.31□□□□□ -0.92
SF3B1-211ENST00000487698 TRMOQ9BU70 441 aa9.31□□□□□ -0.92
SF3B1-211ENST00000487698 C1QTNF3Q9BXJ4 246 aa9.31□□□□□ -0.92
SF3B1-211ENST00000487698 KCNK12Q9HB15 430 aa9.31□□□□□ -0.92
SF3B1-211ENST00000487698 ZDHHC2Q9UIJ5 367 aa9.31□□□□□ -0.92
SF3B1-211ENST00000487698 FADS3Q9Y5Q0 445 aa9.31□□□□□ -0.92
SF3B1-211ENST00000487698 SUPT3HB4E1H0 165 aa9.31□□□□□ -0.92
SF3B1-211ENST00000487698 STX16-NPEPL1H3BU86 382 aa9.31□□□□□ -0.92
SF3B1-211ENST00000487698 EIF3FO00303 357 aaPredicted RBP9.31□□□□□ -0.92
SF3B1-211ENST00000487698 STX16O14662 325 aa9.31□□□□□ -0.92
SF3B1-211ENST00000487698 AP1G1O43747 822 aa9.31□□□□□ -0.92
SF3B1-211ENST00000487698 SUPT3HO75486 399 aa9.31□□□□□ -0.92
SF3B1-211ENST00000487698 RECQL5O94762 991 aaPredicted RBP9.31□□□□□ -0.92
SF3B1-211ENST00000487698 AP2A2O94973 939 aa9.31□□□□□ -0.92
SF3B1-211ENST00000487698 ADH1BP00325 375 aa9.31□□□□□ -0.92
SF3B1-211ENST00000487698 OR56A5P0C7T3 313 aa9.31□□□□□ -0.92
SF3B1-211ENST00000487698 DGKAP23743 735 aa9.31□□□□□ -0.92
SF3B1-211ENST00000487698 AOAHP28039 575 aa9.31□□□□□ -0.92
SF3B1-211ENST00000487698 AKT1P31749 480 aa9.31□□□□□ -0.92
SF3B1-211ENST00000487698 TIE1P35590 1138 aa9.31□□□□□ -0.92
SF3B1-211ENST00000487698 SCTRP47872 440 aa9.31□□□□□ -0.92
SF3B1-211ENST00000487698 RGS4P49798 205 aa9.31□□□□□ -0.92
SF3B1-211ENST00000487698 IDH3AP50213 366 aa9.31□□□□□ -0.92
SF3B1-211ENST00000487698 COPAP53621 1224 aa9.31□□□□□ -0.92
SF3B1-211ENST00000487698 SEC13P55735 322 aa9.31□□□□□ -0.92
SF3B1-211ENST00000487698 DPTQ07507 201 aa9.31□□□□□ -0.92
SF3B1-211ENST00000487698 PPP1R3AQ16821 1122 aa9.31□□□□□ -0.92
SF3B1-211ENST00000487698 ACSBG2Q5FVE4 666 aa9.31□□□□□ -0.92
SF3B1-211ENST00000487698 LDLRAP1Q5SW96 308 aa9.31□□□□□ -0.92
SF3B1-211ENST00000487698 AGBL4Q5VU57 503 aa9.31□□□□□ -0.92
SF3B1-211ENST00000487698 EPGNQ6UW88 154 aa9.31□□□□□ -0.92
SF3B1-211ENST00000487698 RPS27LQ71UM5 84 aaKnown RBP9.31□□□□□ -0.92
SF3B1-211ENST00000487698 ALYREFQ86V81 257 aaKnown RBP9.31□□□□□ -0.92
SF3B1-211ENST00000487698 PELI3Q8N2H9 469 aa9.31□□□□□ -0.92
SF3B1-211ENST00000487698 SLC44A3Q8N4M1 653 aa9.31□□□□□ -0.92
SF3B1-211ENST00000487698 MAPK15Q8TD08 544 aa9.31□□□□□ -0.92
SF3B1-211ENST00000487698 KCNV2Q8TDN2 545 aa9.31□□□□□ -0.92
SF3B1-211ENST00000487698 ERLEC1Q96DZ1 483 aa9.31□□□□□ -0.92
SF3B1-211ENST00000487698 NUS1Q96E22 293 aa9.31□□□□□ -0.92
SF3B1-211ENST00000487698 PRR11Q96HE9 360 aaPredicted RBP9.31□□□□□ -0.92
SF3B1-211ENST00000487698 GAS2L1Q99501 681 aaPredicted RBP9.31□□□□□ -0.92
SF3B1-211ENST00000487698 UBE2ZQ9H832 354 aaPredicted RBP9.31□□□□□ -0.92
SF3B1-211ENST00000487698 ACTR5Q9H9F9 607 aaPredicted RBP9.31□□□□□ -0.92
SF3B1-211ENST00000487698 KCTD5Q9NXV2 234 aa9.31□□□□□ -0.92
SF3B1-211ENST00000487698 ZFP69BQ9UJL9 534 aa9.31□□□□□ -0.92
SF3B1-211ENST00000487698 TMCO1Q9UM00 188 aa9.31□□□□□ -0.92
SF3B1-211ENST00000487698 COQ6Q9Y2Z9 468 aa9.31□□□□□ -0.92
SF3B1-211ENST00000487698 PIAS3Q9Y6X2 628 aa9.31□□□□□ -0.92
SF3B1-211ENST00000487698 ZFC3H1O60293 1989 aaKnown RBP9.3□□□□□ -0.92
SF3B1-211ENST00000487698 CFAP99D6REC4 459 aa9.3□□□□□ -0.92
SF3B1-211ENST00000487698 UBFD1O14562 309 aaKnown RBP9.3□□□□□ -0.92
SF3B1-211ENST00000487698 MID1O15344 667 aa9.3□□□□□ -0.92
SF3B1-211ENST00000487698 HDAC3O15379 428 aa9.3□□□□□ -0.92
SF3B1-211ENST00000487698 GRID2O43424 1007 aa9.3□□□□□ -0.92
SF3B1-211ENST00000487698 MMP20O60882 483 aa9.3□□□□□ -0.92
SF3B1-211ENST00000487698 MTX2O75431 263 aa9.3□□□□□ -0.92
SF3B1-211ENST00000487698 SIX3O95343 332 aaPredicted RBP9.3□□□□□ -0.92
SF3B1-211ENST00000487698 EGFP01133 1207 aa9.3□□□□□ -0.92
SF3B1-211ENST00000487698 RPS17P08708 135 aaKnown RBP9.3□□□□□ -0.92
SF3B1-211ENST00000487698 CBSLP0DN79 551 aa9.3□□□□□ -0.92
SF3B1-211ENST00000487698 GFAPP14136 432 aa9.3□□□□□ -0.92
SF3B1-211ENST00000487698 C5AR1P21730 350 aa9.3□□□□□ -0.92
SF3B1-211ENST00000487698 NTSR1P30989 418 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms