RNA–Protein interactions for RNA: ENST00000487674.1

PRKCB-208, Transcript of protein kinase C beta, humanhuman

TSL 2

Gene PRKCB, Length 693 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-208ENST00000487674 TMEM253P0C7T8 217 aa8.4□□□□□ -1.06
PRKCB-208ENST00000487674 PIRTP0C851 137 aa8.4□□□□□ -1.06
PRKCB-208ENST00000487674 ZNF7P17097 686 aaPredicted RBP8.4□□□□□ -1.06
PRKCB-208ENST00000487674 BPIP17213 487 aa8.4□□□□□ -1.06
PRKCB-208ENST00000487674 TYRP1P17643 537 aa8.4□□□□□ -1.06
PRKCB-208ENST00000487674 TCN2P20062 427 aa8.4□□□□□ -1.06
PRKCB-208ENST00000487674 CASP14P31944 242 aa8.4□□□□□ -1.06
PRKCB-208ENST00000487674 CDK18Q07002 472 aa8.4□□□□□ -1.06
PRKCB-208ENST00000487674 FOXM1Q08050 763 aa8.4□□□□□ -1.06
PRKCB-208ENST00000487674 AP1B1Q10567 949 aa8.4□□□□□ -1.06
PRKCB-208ENST00000487674 SEPT6Q14141 434 aa8.4□□□□□ -1.06
PRKCB-208ENST00000487674 IL11RAQ14626 422 aa8.4□□□□□ -1.06
PRKCB-208ENST00000487674 SEPT7Q16181 437 aaKnown RBP8.4□□□□□ -1.06
PRKCB-208ENST00000487674 PCSK7Q16549 785 aa8.4□□□□□ -1.06
PRKCB-208ENST00000487674 SKIDA1Q1XH10 827 aa8.4□□□□□ -1.06
PRKCB-208ENST00000487674 DEFB109BQ30KR1 87 aa8.4□□□□□ -1.06
PRKCB-208ENST00000487674 LACTB2Q53H82 288 aaPredicted RBP8.4□□□□□ -1.06
PRKCB-208ENST00000487674 ZNF648Q5T619 568 aaPredicted RBP8.4□□□□□ -1.06
PRKCB-208ENST00000487674 AGAP9Q5VTM2 703 aa8.4□□□□□ -1.06
PRKCB-208ENST00000487674 CYB5D1Q6P9G0 228 aa8.4□□□□□ -1.06
PRKCB-208ENST00000487674 ABRAXAS1Q6UWZ7 409 aa8.4□□□□□ -1.06
PRKCB-208ENST00000487674 WASH2PQ6VEQ5 465 aa8.4□□□□□ -1.06
PRKCB-208ENST00000487674 PRSS42Q7Z5A4 293 aa8.4□□□□□ -1.06
PRKCB-208ENST00000487674 TMC3Q7Z5M5 1100 aa8.4□□□□□ -1.06
PRKCB-208ENST00000487674 NT5DC3Q86UY8 548 aa8.4□□□□□ -1.06
PRKCB-208ENST00000487674 RBM12BQ8IXT5 1001 aaKnown RBP8.4□□□□□ -1.06
PRKCB-208ENST00000487674 AGAP3Q96P47 875 aa8.4□□□□□ -1.06
PRKCB-208ENST00000487674 TGM7Q96PF1 710 aa8.4□□□□□ -1.06
PRKCB-208ENST00000487674 VPS35Q96QK1 796 aa8.4□□□□□ -1.06
PRKCB-208ENST00000487674 SRPK1Q96SB4 655 aaKnown RBP8.4□□□□□ -1.06
PRKCB-208ENST00000487674 CEP41Q9BYV8 373 aa8.4□□□□□ -1.06
PRKCB-208ENST00000487674 GPR63Q9BZJ6 419 aa8.4□□□□□ -1.06
PRKCB-208ENST00000487674 SLC25A51Q9H1U9 297 aa8.4□□□□□ -1.06
PRKCB-208ENST00000487674 ZNF768Q9H5H4 540 aaKnown RBP8.4□□□□□ -1.06
PRKCB-208ENST00000487674 WASH6PQ9NQA3 447 aa8.4□□□□□ -1.06
PRKCB-208ENST00000487674 ZNF624Q9P2J8 865 aaPredicted RBP8.4□□□□□ -1.06
PRKCB-208ENST00000487674 SLC23A2Q9UGH3 650 aa8.4□□□□□ -1.06
PRKCB-208ENST00000487674 KCTD3Q9Y597 815 aa8.4□□□□□ -1.06
PRKCB-208ENST00000487674 SLC30A1Q9Y6M5 507 aa8.4□□□□□ -1.06
PRKCB-208ENST00000487674 SSU72P8A0A1W2PR75 194 aa8.39□□□□□ -1.07
PRKCB-208ENST00000487674 SYCE3A1L190 88 aa8.39□□□□□ -1.07
PRKCB-208ENST00000487674 GOLGA6L3A6NEY3 463 aa8.39□□□□□ -1.07
PRKCB-208ENST00000487674 MTX2O75431 263 aa8.39□□□□□ -1.07
PRKCB-208ENST00000487674 RASSF9O75901 435 aa8.39□□□□□ -1.07
PRKCB-208ENST00000487674 CDK14O94921 469 aa8.39□□□□□ -1.07
PRKCB-208ENST00000487674 NDST3O95803 873 aa8.39□□□□□ -1.07
PRKCB-208ENST00000487674 KRT1P04264 644 aa8.39□□□□□ -1.07
PRKCB-208ENST00000487674 TPM3P06753 285 aa8.39□□□□□ -1.07
PRKCB-208ENST00000487674 BRAFP15056 766 aa8.39□□□□□ -1.07
PRKCB-208ENST00000487674 ZFXP17010 805 aaPredicted RBP8.39□□□□□ -1.07
PRKCB-208ENST00000487674 ZNF28P17035 718 aa8.39□□□□□ -1.07
PRKCB-208ENST00000487674 AMD1P17707 334 aa8.39□□□□□ -1.07
PRKCB-208ENST00000487674 VCLP18206 1134 aa8.39□□□□□ -1.07
PRKCB-208ENST00000487674 IDSP22304 550 aa8.39□□□□□ -1.07
PRKCB-208ENST00000487674 DLSTP36957 453 aa8.39□□□□□ -1.07
PRKCB-208ENST00000487674 LEPRP48357 1165 aaKnown RBP8.39□□□□□ -1.07
PRKCB-208ENST00000487674 SEPHS1P49903 392 aa8.39□□□□□ -1.07
PRKCB-208ENST00000487674 SRSF1Q07955 248 aaKnown RBP eCLIP8.39□□□□□ -1.07
PRKCB-208ENST00000487674 GPR18Q14330 331 aa8.39□□□□□ -1.07
PRKCB-208ENST00000487674 MESDQ14696 234 aa8.39□□□□□ -1.07
PRKCB-208ENST00000487674 KHDC1Q4VXA5 237 aaKnown RBP8.39□□□□□ -1.07
PRKCB-208ENST00000487674 COLEC12Q5KU26 742 aa8.39□□□□□ -1.07
PRKCB-208ENST00000487674 ATP1A1-AS1Q5TC04 95 aa8.39□□□□□ -1.07
PRKCB-208ENST00000487674 LRRC38Q5VT99 294 aa8.39□□□□□ -1.07
PRKCB-208ENST00000487674 C16orf46Q6P387 395 aa8.39□□□□□ -1.07
PRKCB-208ENST00000487674 C6orf15Q6UXA7 325 aaPredicted RBP8.39□□□□□ -1.07
PRKCB-208ENST00000487674 TRAPPC5Q8IUR0 188 aa8.39□□□□□ -1.07
PRKCB-208ENST00000487674 ZNF547Q8IVP9 402 aa8.39□□□□□ -1.07
PRKCB-208ENST00000487674 GALNT6Q8NCL4 622 aa8.39□□□□□ -1.07
PRKCB-208ENST00000487674 RSC1A1Q92681 617 aa8.39□□□□□ -1.07
PRKCB-208ENST00000487674 CXorf40BQ96DE9 158 aa8.39□□□□□ -1.07
PRKCB-208ENST00000487674 STAMBPL1Q96FJ0 436 aa8.39□□□□□ -1.07
PRKCB-208ENST00000487674 ZDHHC12Q96GR4 267 aa8.39□□□□□ -1.07
PRKCB-208ENST00000487674 ABHD17AQ96GS6 310 aa8.39□□□□□ -1.07
PRKCB-208ENST00000487674 OR6C1Q96RD1 312 aa8.39□□□□□ -1.07
PRKCB-208ENST00000487674 DNAJC7Q99615 494 aa8.39□□□□□ -1.07
PRKCB-208ENST00000487674 MAK16Q9BXY0 300 aaKnown RBP8.39□□□□□ -1.07
PRKCB-208ENST00000487674 XPO4Q9C0E2 1151 aaKnown RBP8.39□□□□□ -1.07
PRKCB-208ENST00000487674 DEF6Q9H4E7 631 aa8.39□□□□□ -1.07
PRKCB-208ENST00000487674 SLC40A1Q9NP59 571 aa8.39□□□□□ -1.07
PRKCB-208ENST00000487674 ZNF71Q9NQZ8 489 aaPredicted RBP8.39□□□□□ -1.07
PRKCB-208ENST00000487674 IFNKQ9P0W0 207 aa8.39□□□□□ -1.07
PRKCB-208ENST00000487674 CROTQ9UKG9 612 aa8.39□□□□□ -1.07
PRKCB-208ENST00000487674 DNAJC16Q9Y2G8 782 aa8.39□□□□□ -1.07
PRKCB-208ENST00000487674 SPO11Q9Y5K1 396 aa8.39□□□□□ -1.07
PRKCB-208ENST00000487674 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.39□□□□□ -1.07
PRKCB-208ENST00000487674 MRPS18BQ9Y676 258 aaKnown RBP8.39□□□□□ -1.07
PRKCB-208ENST00000487674 UNC79Q9P2D8 2635 aa8.38□□□□□ -1.07
PRKCB-208ENST00000487674 A0A0A6YYK5 440 aaPredicted RBP8.38□□□□□ -1.07
PRKCB-208ENST00000487674 OR52A4PA6NMU1 304 aa8.38□□□□□ -1.07
PRKCB-208ENST00000487674 KCNJ13O60928 360 aa8.38□□□□□ -1.07
PRKCB-208ENST00000487674 PMPCBO75439 489 aa8.38□□□□□ -1.07
PRKCB-208ENST00000487674 KIAA0754O94854 1291 aa8.38□□□□□ -1.07
PRKCB-208ENST00000487674 NDUFA10O95299 355 aa8.38□□□□□ -1.07
PRKCB-208ENST00000487674 MT-CYBP00156 380 aaPredicted RBP8.38□□□□□ -1.07
PRKCB-208ENST00000487674 FGF5P12034 268 aa8.38□□□□□ -1.07
PRKCB-208ENST00000487674 F8A1P23610 371 aa8.38□□□□□ -1.07
PRKCB-208ENST00000487674 RPL10P27635 214 aaKnown RBP8.38□□□□□ -1.07
PRKCB-208ENST00000487674 HMGCLP35914 325 aa8.38□□□□□ -1.07
PRKCB-208ENST00000487674 ARHGAP25P42331 645 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms