RNA–Protein interactions for RNA: ENST00000487244.5

UBE4B-209, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best)

Gene UBE4B, Length 818 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-209ENST00000487244 SPRED1Q7Z699 444 aa7.07□□□□□ -1.28
UBE4B-209ENST00000487244 C17orf82Q86X59 251 aaPredicted RBP7.07□□□□□ -1.28
UBE4B-209ENST00000487244 ZNF761Q86XN6 746 aaPredicted RBP7.07□□□□□ -1.28
UBE4B-209ENST00000487244 PHYKPLQ8IUZ5 450 aa7.07□□□□□ -1.28
UBE4B-209ENST00000487244 CCNJLQ8IV13 435 aa7.07□□□□□ -1.28
UBE4B-209ENST00000487244 OR4K2Q8NGD2 314 aa7.07□□□□□ -1.28
UBE4B-209ENST00000487244 OR13C4Q8NGS5 318 aa7.07□□□□□ -1.28
UBE4B-209ENST00000487244 ATXN7L3BQ96GX2 97 aa7.07□□□□□ -1.28
UBE4B-209ENST00000487244 MS4A14Q96JA4 679 aa7.07□□□□□ -1.28
UBE4B-209ENST00000487244 PDLIM2Q96JY6 352 aa7.07□□□□□ -1.28
UBE4B-209ENST00000487244 FERMT1Q9BQL6 677 aa7.07□□□□□ -1.28
UBE4B-209ENST00000487244 FOXP3Q9BZS1 431 aa7.07□□□□□ -1.28
UBE4B-209ENST00000487244 ABCG4Q9H172 646 aa7.07□□□□□ -1.28
UBE4B-209ENST00000487244 TRABDQ9H4I3 376 aa7.07□□□□□ -1.28
UBE4B-209ENST00000487244 TRMT1Q9NXH9 659 aaKnown RBP7.07□□□□□ -1.28
UBE4B-209ENST00000487244 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.07□□□□□ -1.28
UBE4B-209ENST00000487244 HACD3Q9P035 362 aa7.07□□□□□ -1.28
UBE4B-209ENST00000487244 TBC1D29Q9UFV1 150 aa7.07□□□□□ -1.28
UBE4B-209ENST00000487244 SLC23A2Q9UGH3 650 aa7.07□□□□□ -1.28
UBE4B-209ENST00000487244 ATXN7L1Q9ULK2 861 aaPredicted RBP7.07□□□□□ -1.28
UBE4B-209ENST00000487244 PYCARDQ9ULZ3 195 aa7.07□□□□□ -1.28
UBE4B-209ENST00000487244 ZNF232Q9UNY5 417 aa7.07□□□□□ -1.28
UBE4B-209ENST00000487244 ZNF148Q9UQR1 794 aa7.07□□□□□ -1.28
UBE4B-209ENST00000487244 AAR2Q9Y312 384 aaKnown RBP7.07□□□□□ -1.28
UBE4B-209ENST00000487244 PKP3Q9Y446 797 aa7.07□□□□□ -1.28
UBE4B-209ENST00000487244 PTPRQQ9UMZ3 2332 aa7.06□□□□□ -1.28
UBE4B-209ENST00000487244 LAMA5O15230 3695 aa7.06□□□□□ -1.28
UBE4B-209ENST00000487244 GLYATL1P3A0A0U1RQE8 302 aa7.06□□□□□ -1.28
UBE4B-209ENST00000487244 A6NCN8 305 aa7.06□□□□□ -1.28
UBE4B-209ENST00000487244 D6RAR5 112 aa7.06□□□□□ -1.28
UBE4B-209ENST00000487244 AGRPO00253 132 aa7.06□□□□□ -1.28
UBE4B-209ENST00000487244 NTN3O00634 580 aaPredicted RBP7.06□□□□□ -1.28
UBE4B-209ENST00000487244 CHUKO15111 745 aa7.06□□□□□ -1.28
UBE4B-209ENST00000487244 PPM1DO15297 605 aa7.06□□□□□ -1.28
UBE4B-209ENST00000487244 STX7O15400 261 aaKnown RBP7.06□□□□□ -1.28
UBE4B-209ENST00000487244 GRID2O43424 1007 aa7.06□□□□□ -1.28
UBE4B-209ENST00000487244 LDB2O43679 373 aa7.06□□□□□ -1.28
UBE4B-209ENST00000487244 NRDCO43847 1150 aa7.06□□□□□ -1.28
UBE4B-209ENST00000487244 BRINP1O60477 761 aa7.06□□□□□ -1.28
UBE4B-209ENST00000487244 SNX2O60749 519 aa7.06□□□□□ -1.28
UBE4B-209ENST00000487244 PRAMEF1O95521 474 aa7.06□□□□□ -1.28
UBE4B-209ENST00000487244 AP2A1O95782 977 aa7.06□□□□□ -1.28
UBE4B-209ENST00000487244 MPOP05164 745 aa7.06□□□□□ -1.28
UBE4B-209ENST00000487244 PRSS56P0CW18 603 aa7.06□□□□□ -1.28
UBE4B-209ENST00000487244 GLB1P16278 677 aa7.06□□□□□ -1.28
UBE4B-209ENST00000487244 LPOP22079 712 aaPredicted RBP7.06□□□□□ -1.28
UBE4B-209ENST00000487244 RPL22P35268 128 aaKnown RBP7.06□□□□□ -1.28
UBE4B-209ENST00000487244 GRIA1P42261 906 aa7.06□□□□□ -1.28
UBE4B-209ENST00000487244 KCNJ1P48048 391 aa7.06□□□□□ -1.28
UBE4B-209ENST00000487244 CDKN1CP49918 316 aaPredicted RBP7.06□□□□□ -1.28
UBE4B-209ENST00000487244 CTSCP53634 463 aa7.06□□□□□ -1.28
UBE4B-209ENST00000487244 EPHA4P54764 986 aa7.06□□□□□ -1.28
UBE4B-209ENST00000487244 OR1D5P58170 312 aa7.06□□□□□ -1.28
UBE4B-209ENST00000487244 XIAPP98170 497 aa7.06□□□□□ -1.28
UBE4B-209ENST00000487244 LRP8Q14114 963 aa7.06□□□□□ -1.28
UBE4B-209ENST00000487244 SEPT6Q14141 434 aa7.06□□□□□ -1.28
UBE4B-209ENST00000487244 POU6F1Q14863 301 aa7.06□□□□□ -1.28
UBE4B-209ENST00000487244 ISXQ2M1V0 245 aa7.06□□□□□ -1.28
UBE4B-209ENST00000487244 P3H1Q32P28 736 aa7.06□□□□□ -1.28
UBE4B-209ENST00000487244 CCDC38Q502W7 563 aa7.06□□□□□ -1.28
UBE4B-209ENST00000487244 GPRC6AQ5T6X5 926 aa7.06□□□□□ -1.28
UBE4B-209ENST00000487244 PDPK2PQ6A1A2 396 aa7.06□□□□□ -1.28
UBE4B-209ENST00000487244 TTC27Q6P3X3 843 aa7.06□□□□□ -1.28
UBE4B-209ENST00000487244 FIGNL1Q6PIW4 674 aa7.06□□□□□ -1.28
UBE4B-209ENST00000487244 RBM44Q6ZP01 1051 aaKnown RBP7.06□□□□□ -1.28
UBE4B-209ENST00000487244 ZNF438Q7Z4V0 828 aa7.06□□□□□ -1.28
UBE4B-209ENST00000487244 C11orf96Q7Z7L8 435 aa7.06□□□□□ -1.28
UBE4B-209ENST00000487244 SLC35F6Q8N357 371 aa7.06□□□□□ -1.28
UBE4B-209ENST00000487244 ARL14Q8N4G2 192 aa7.06□□□□□ -1.28
UBE4B-209ENST00000487244 PRELID2Q8N945 189 aa7.06□□□□□ -1.28
UBE4B-209ENST00000487244 RASGEF1AQ8N9B8 481 aa7.06□□□□□ -1.28
UBE4B-209ENST00000487244 DDHD1Q8NEL9 900 aa7.06□□□□□ -1.28
UBE4B-209ENST00000487244 OR52K1Q8NGK4 314 aa7.06□□□□□ -1.28
UBE4B-209ENST00000487244 GDAP1Q8TB36 358 aa7.06□□□□□ -1.28
UBE4B-209ENST00000487244 SLC37A2Q8TED4 501 aa7.06□□□□□ -1.28
UBE4B-209ENST00000487244 COG1Q8WTW3 980 aa7.06□□□□□ -1.28
UBE4B-209ENST00000487244 NXPE2Q96DL1 559 aa7.06□□□□□ -1.28
UBE4B-209ENST00000487244 DNAJC1Q96KC8 554 aaKnown RBP7.06□□□□□ -1.28
UBE4B-209ENST00000487244 VPS35Q96QK1 796 aa7.06□□□□□ -1.28
UBE4B-209ENST00000487244 SRPK1Q96SB4 655 aaKnown RBP7.06□□□□□ -1.28
UBE4B-209ENST00000487244 OSGEPL1Q9H4B0 414 aa7.06□□□□□ -1.28
UBE4B-209ENST00000487244 FAM96AQ9H5X1 160 aa7.06□□□□□ -1.28
UBE4B-209ENST00000487244 CCDC86Q9H6F5 360 aaKnown RBP7.06□□□□□ -1.28
UBE4B-209ENST00000487244 LRRC40Q9H9A6 602 aa7.06□□□□□ -1.28
UBE4B-209ENST00000487244 RDH14Q9HBH5 336 aa7.06□□□□□ -1.28
UBE4B-209ENST00000487244 ARNT2Q9HBZ2 717 aa7.06□□□□□ -1.28
UBE4B-209ENST00000487244 TRIM39Q9HCM9 518 aa7.06□□□□□ -1.28
UBE4B-209ENST00000487244 PRDM8Q9NQV8 689 aa7.06□□□□□ -1.28
UBE4B-209ENST00000487244 RAD18Q9NS91 495 aa7.06□□□□□ -1.28
UBE4B-209ENST00000487244 KLC4Q9NSK0 619 aa7.06□□□□□ -1.28
UBE4B-209ENST00000487244 ZDHHC3Q9NYG2 299 aa7.06□□□□□ -1.28
UBE4B-209ENST00000487244 LRIT1Q9P2V4 623 aa7.06□□□□□ -1.28
UBE4B-209ENST00000487244 DNAJC16Q9Y2G8 782 aa7.06□□□□□ -1.28
UBE4B-209ENST00000487244 RAXQ9Y2V3 346 aa7.06□□□□□ -1.28
UBE4B-209ENST00000487244 ENTPD2Q9Y5L3 495 aa7.06□□□□□ -1.28
UBE4B-209ENST00000487244 ZFHX4Q86UP3 3567 aa7.06□□□□□ -1.28
UBE4B-209ENST00000487244 MGAQ8IWI9 3026 aa7.05□□□□□ -1.28
UBE4B-209ENST00000487244 PRAMEF33A0A0G2JMD5 474 aa7.05□□□□□ -1.28
UBE4B-209ENST00000487244 A0A1W2PNR3 127 aa7.05□□□□□ -1.28
UBE4B-209ENST00000487244 SERTM1A2A2V5 107 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms