RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 AMIGO2Q86SJ2 522 aa17.77■□□□□ 0.44
PDLIM7-207ENST00000486828 ANKFN1Q8N957 763 aa17.77■□□□□ 0.44
PDLIM7-207ENST00000486828 WFDC5Q8TCV5 224 aa17.77■□□□□ 0.44
PDLIM7-207ENST00000486828 ZFAND2BQ8WV99 257 aa17.77■□□□□ 0.44
PDLIM7-207ENST00000486828 SLC45A3Q96JT2 553 aa17.77■□□□□ 0.44
PDLIM7-207ENST00000486828 TEX37Q96LM6 180 aa17.77■□□□□ 0.44
PDLIM7-207ENST00000486828 SLC22A12Q96S37 553 aa17.77■□□□□ 0.44
PDLIM7-207ENST00000486828 ACOX2Q99424 681 aa17.77■□□□□ 0.44
PDLIM7-207ENST00000486828 CCM2LQ9NUG4 571 aaPredicted RBP17.77■□□□□ 0.44
PDLIM7-207ENST00000486828 NDUFA13Q9P0J0 144 aa17.77■□□□□ 0.44
PDLIM7-207ENST00000486828 ACTR3BQ9P1U1 418 aa17.77■□□□□ 0.44
PDLIM7-207ENST00000486828 LZTS1Q9Y250 596 aa17.77■□□□□ 0.44
PDLIM7-207ENST00000486828 AK5Q9Y6K8 562 aa17.77■□□□□ 0.44
PDLIM7-207ENST00000486828 MICAL3Q7RTP6 2002 aa17.77■□□□□ 0.43
PDLIM7-207ENST00000486828 ASPDHA6ND91 283 aa17.76■□□□□ 0.43
PDLIM7-207ENST00000486828 PRRG1O14668 218 aa17.76■□□□□ 0.43
PDLIM7-207ENST00000486828 EEDO75530 441 aaKnown RBP17.76■□□□□ 0.43
PDLIM7-207ENST00000486828 PARNO95453 639 aaKnown RBP17.76■□□□□ 0.43
PDLIM7-207ENST00000486828 ALPIP09923 528 aa17.76■□□□□ 0.43
PDLIM7-207ENST00000486828 CREB5Q02930 508 aa17.76■□□□□ 0.43
PDLIM7-207ENST00000486828 NFYCQ13952 458 aa17.76■□□□□ 0.43
PDLIM7-207ENST00000486828 RAB33AQ14088 237 aa17.76■□□□□ 0.43
PDLIM7-207ENST00000486828 PCBP2Q15366 365 aaKnown RBP eCLIP17.76■□□□□ 0.432e-6■■■■□ 24.4
PDLIM7-207ENST00000486828 NAIF1Q69YI7 327 aaPredicted RBP17.76■□□□□ 0.43
PDLIM7-207ENST00000486828 Q6ZNB5 142 aa17.76■□□□□ 0.43
PDLIM7-207ENST00000486828 SATL1Q86VE3 508 aa17.76■□□□□ 0.43
PDLIM7-207ENST00000486828 DIS3LQ8TF46 1054 aaKnown RBP17.76■□□□□ 0.43
PDLIM7-207ENST00000486828 NCSTNQ92542 709 aa17.76■□□□□ 0.43
PDLIM7-207ENST00000486828 PPWD1Q96BP3 646 aaKnown RBP17.76■□□□□ 0.43
PDLIM7-207ENST00000486828 OSBPL11Q9BXB4 747 aa17.76■□□□□ 0.43
PDLIM7-207ENST00000486828 MRPS26Q9BYN8 205 aaKnown RBP17.76■□□□□ 0.43
PDLIM7-207ENST00000486828 NOL11Q9H8H0 719 aaKnown RBP17.76■□□□□ 0.43
PDLIM7-207ENST00000486828 TMEM45AQ9NWC5 275 aa17.76■□□□□ 0.43
PDLIM7-207ENST00000486828 K7ERQ8 282 aa17.76■□□□□ 0.43
PDLIM7-207ENST00000486828 TIPRLO75663 272 aa17.76■□□□□ 0.43
PDLIM7-207ENST00000486828 SLC22A3O75751 556 aa17.76■□□□□ 0.43
PDLIM7-207ENST00000486828 PGM3O95394 542 aa17.76■□□□□ 0.43
PDLIM7-207ENST00000486828 BMP2P12643 396 aa17.76■□□□□ 0.43
PDLIM7-207ENST00000486828 PSMC3P17980 439 aa17.76■□□□□ 0.43
PDLIM7-207ENST00000486828 RPS3P23396 243 aaKnown RBP eCLIP17.76■□□□□ 0.439e-7■□□□□ 8.9
PDLIM7-207ENST00000486828 GSTT1P30711 240 aa17.76■□□□□ 0.43
PDLIM7-207ENST00000486828 RPL5P46777 297 aaKnown RBP17.76■□□□□ 0.43
PDLIM7-207ENST00000486828 ERVPABLB-1P60509 514 aa17.76■□□□□ 0.43
PDLIM7-207ENST00000486828 UFM1P61960 85 aa17.76■□□□□ 0.43
PDLIM7-207ENST00000486828 YBX1P67809 324 aaKnown RBP17.76■□□□□ 0.43
PDLIM7-207ENST00000486828 INPP5AQ14642 412 aa17.76■□□□□ 0.43
PDLIM7-207ENST00000486828 SPOUT1Q5T280 376 aaKnown RBP17.76■□□□□ 0.43
PDLIM7-207ENST00000486828 FRA10AC1Q70Z53 315 aa17.76■□□□□ 0.43
PDLIM7-207ENST00000486828 ADAMTSL2Q86TH1 951 aa17.76■□□□□ 0.43
PDLIM7-207ENST00000486828 CAMK1DQ8IU85 385 aa17.76■□□□□ 0.43
PDLIM7-207ENST00000486828 CHERPQ8IWX8 916 aaKnown RBP17.76■□□□□ 0.43
PDLIM7-207ENST00000486828 CDYL2Q8N8U2 506 aa17.76■□□□□ 0.43
PDLIM7-207ENST00000486828 OR52B6Q8NGF0 335 aa17.76■□□□□ 0.43
PDLIM7-207ENST00000486828 GRIN3AQ8TCU5 1115 aa17.76■□□□□ 0.43
PDLIM7-207ENST00000486828 TMEM125Q96AQ2 219 aa17.76■□□□□ 0.43
PDLIM7-207ENST00000486828 VPS33AQ96AX1 596 aa17.76■□□□□ 0.43
PDLIM7-207ENST00000486828 HERC2P3Q9BVR0 1158 aa17.76■□□□□ 0.43
PDLIM7-207ENST00000486828 TM6SF2Q9BZW4 377 aa17.76■□□□□ 0.43
PDLIM7-207ENST00000486828 ZNF334Q9HCZ1 680 aaPredicted RBP17.76■□□□□ 0.43
PDLIM7-207ENST00000486828 ZIM2Q9NZV7 527 aa17.76■□□□□ 0.43
PDLIM7-207ENST00000486828 LEF1Q9UJU2 399 aaPredicted RBP17.76■□□□□ 0.43
PDLIM7-207ENST00000486828 APPL1Q9UKG1 709 aa17.76■□□□□ 0.43
PDLIM7-207ENST00000486828 TNPO3Q9Y5L0 923 aaKnown RBP17.76■□□□□ 0.43
PDLIM7-207ENST00000486828 ST14Q9Y5Y6 855 aa17.76■□□□□ 0.43
PDLIM7-207ENST00000486828 COL4A6Q14031 1691 aa17.76■□□□□ 0.43
PDLIM7-207ENST00000486828 CCDC154A6NI56 674 aa17.75■□□□□ 0.43
PDLIM7-207ENST00000486828 GAPDHSO14556 408 aaPredicted RBP17.75■□□□□ 0.43
PDLIM7-207ENST00000486828 CLPTM1O96005 669 aa17.75■□□□□ 0.43
PDLIM7-207ENST00000486828 ZNF7P17097 686 aaPredicted RBP17.75■□□□□ 0.43
PDLIM7-207ENST00000486828 EPHB3P54753 998 aa17.75■□□□□ 0.43
PDLIM7-207ENST00000486828 TXNL4AP83876 142 aaKnown RBP17.75■□□□□ 0.43
PDLIM7-207ENST00000486828 ROR2Q01974 943 aaKnown RBP17.75■□□□□ 0.43
PDLIM7-207ENST00000486828 C6orf136Q5SQH8 315 aa17.75■□□□□ 0.43
PDLIM7-207ENST00000486828 PTRHD1Q6GMV3 140 aaKnown RBP17.75■□□□□ 0.43
PDLIM7-207ENST00000486828 SBSNQ6UWP8 590 aa17.75■□□□□ 0.43
PDLIM7-207ENST00000486828 FAM151BQ6UXP7 276 aa17.75■□□□□ 0.43
PDLIM7-207ENST00000486828 SPPL2CQ8IUH8 684 aa17.75■□□□□ 0.43
PDLIM7-207ENST00000486828 EGFL6Q8IUX8 553 aa17.75■□□□□ 0.43
PDLIM7-207ENST00000486828 FAM217AQ8IXS0 508 aa17.75■□□□□ 0.43
PDLIM7-207ENST00000486828 ARL14EPQ8N8R7 260 aaPredicted RBP17.75■□□□□ 0.43
PDLIM7-207ENST00000486828 SLC29A1Q99808 456 aa17.75■□□□□ 0.43
PDLIM7-207ENST00000486828 CIB1Q99828 191 aa17.75■□□□□ 0.43
PDLIM7-207ENST00000486828 C19orf43Q9BQ61 176 aa17.75■□□□□ 0.43
PDLIM7-207ENST00000486828 CLPBQ9H078 707 aa17.75■□□□□ 0.43
PDLIM7-207ENST00000486828 MUC13Q9H3R2 512 aa17.75■□□□□ 0.43
PDLIM7-207ENST00000486828 EGFL7Q9UHF1 273 aa17.75■□□□□ 0.43
PDLIM7-207ENST00000486828 DHRS12A0PJE2 317 aa17.74■□□□□ 0.43
PDLIM7-207ENST00000486828 HNRNPRO43390 633 aaKnown RBP17.74■□□□□ 0.43
PDLIM7-207ENST00000486828 AKAP10O43572 662 aa17.74■□□□□ 0.43
PDLIM7-207ENST00000486828 BAIAP3O94812 1187 aa17.74■□□□□ 0.43
PDLIM7-207ENST00000486828 PRAMEF1O95521 474 aa17.74■□□□□ 0.43
PDLIM7-207ENST00000486828 OLFM2O95897 454 aa17.74■□□□□ 0.43
PDLIM7-207ENST00000486828 TFAP2AP05549 437 aa17.74■□□□□ 0.43
PDLIM7-207ENST00000486828 POLR2JP52435 117 aaKnown RBP17.74■□□□□ 0.43
PDLIM7-207ENST00000486828 ZXDBP98169 803 aa17.74■□□□□ 0.43
PDLIM7-207ENST00000486828 ATP6AP1LQ52LC2 224 aa17.74■□□□□ 0.43
PDLIM7-207ENST00000486828 PAGE3Q5JUK9 113 aa17.74■□□□□ 0.43
PDLIM7-207ENST00000486828 TBCELQ5QJ74 424 aa17.74■□□□□ 0.43
PDLIM7-207ENST00000486828 LETMD1Q6P1Q0 360 aa17.74■□□□□ 0.43
PDLIM7-207ENST00000486828 Q6ZSR9 355 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms