RNA–Protein interactions for RNA: ENST00000486806.1

MCF2L-227, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-227ENST00000486806 XKR5Q6UX68 686 aa9.44□□□□□ -0.9
MCF2L-227ENST00000486806 DET1Q7L5Y6 550 aa9.44□□□□□ -0.9
MCF2L-227ENST00000486806 TAOK1Q7L7X3 1001 aa9.44□□□□□ -0.9
MCF2L-227ENST00000486806 C11orf96Q7Z7L8 435 aa9.44□□□□□ -0.9
MCF2L-227ENST00000486806 PARGQ86W56 976 aa9.44□□□□□ -0.9
MCF2L-227ENST00000486806 SPATS2Q86XZ4 545 aaKnown RBP9.44□□□□□ -0.9
MCF2L-227ENST00000486806 DCP2Q8IU60 420 aaKnown RBP9.44□□□□□ -0.9
MCF2L-227ENST00000486806 RGL4Q8IZJ4 473 aa9.44□□□□□ -0.9
MCF2L-227ENST00000486806 DCLK2Q8N568 766 aa9.44□□□□□ -0.9
MCF2L-227ENST00000486806 OXR1Q8N573 874 aa9.44□□□□□ -0.9
MCF2L-227ENST00000486806 GPATCH11Q8N954 259 aa9.44□□□□□ -0.9
MCF2L-227ENST00000486806 GIMAP7Q8NHV1 300 aa9.44□□□□□ -0.9
MCF2L-227ENST00000486806 FAM45AQ8TCE6 357 aa9.44□□□□□ -0.9
MCF2L-227ENST00000486806 OR1E3Q8WZA6 343 aa9.44□□□□□ -0.9
MCF2L-227ENST00000486806 SGF29Q96ES7 293 aa9.44□□□□□ -0.9
MCF2L-227ENST00000486806 KLHDC7BQ96G42 594 aa9.44□□□□□ -0.9
MCF2L-227ENST00000486806 ZNF514Q96K75 400 aaPredicted RBP9.44□□□□□ -0.9
MCF2L-227ENST00000486806 OLFM1Q99784 485 aa9.44□□□□□ -0.9
MCF2L-227ENST00000486806 RMI1Q9H9A7 625 aa9.44□□□□□ -0.9
MCF2L-227ENST00000486806 GULP1Q9UBP9 304 aa9.44□□□□□ -0.9
MCF2L-227ENST00000486806 SUSD2Q9UGT4 822 aa9.44□□□□□ -0.9
MCF2L-227ENST00000486806 GPR34Q9UPC5 381 aa9.44□□□□□ -0.9
MCF2L-227ENST00000486806 TMEM98Q9Y2Y6 226 aa9.44□□□□□ -0.9
MCF2L-227ENST00000486806 MTO1Q9Y2Z2 717 aaKnown RBP9.44□□□□□ -0.9
MCF2L-227ENST00000486806 IKBKGQ9Y6K9 419 aa9.44□□□□□ -0.9
MCF2L-227ENST00000486806 DGKBQ9Y6T7 804 aa9.44□□□□□ -0.9
MCF2L-227ENST00000486806 R4GN57 208 aa9.44□□□□□ -0.9
MCF2L-227ENST00000486806 TNRC6BQ9UPQ9 1833 aaKnown RBP9.44□□□□□ -0.9
MCF2L-227ENST00000486806 IQANK1A0A1B0GTG1 560 aa9.43□□□□□ -0.9
MCF2L-227ENST00000486806 A0A1B0GTW7 788 aa9.43□□□□□ -0.9
MCF2L-227ENST00000486806 PRR19A6NJB7 356 aa9.43□□□□□ -0.9
MCF2L-227ENST00000486806 SMIM23A6NLE4 172 aa9.43□□□□□ -0.9
MCF2L-227ENST00000486806 OR2AG2A6NM03 316 aa9.43□□□□□ -0.9
MCF2L-227ENST00000486806 IQCF5A8MTL0 148 aa9.43□□□□□ -0.9
MCF2L-227ENST00000486806 PRR5-ARHGAP8B1AHC4 643 aa9.43□□□□□ -0.9
MCF2L-227ENST00000486806 TLR4O00206 839 aa9.43□□□□□ -0.9
MCF2L-227ENST00000486806 NIPSNAP2O75323 286 aa9.43□□□□□ -0.9
MCF2L-227ENST00000486806 KRT37O76014 449 aa9.43□□□□□ -0.9
MCF2L-227ENST00000486806 KRT38O76015 456 aa9.43□□□□□ -0.9
MCF2L-227ENST00000486806 EPN2O95208 641 aa9.43□□□□□ -0.9
MCF2L-227ENST00000486806 ASMTLO95671 621 aa9.43□□□□□ -0.9
MCF2L-227ENST00000486806 SNRPAP09012 282 aaKnown RBP9.43□□□□□ -0.9
MCF2L-227ENST00000486806 GSTM1P09488 218 aa9.43□□□□□ -0.9
MCF2L-227ENST00000486806 OR56A5P0C7T3 313 aa9.43□□□□□ -0.9
MCF2L-227ENST00000486806 DPP6P42658 865 aa9.43□□□□□ -0.9
MCF2L-227ENST00000486806 CLCN7P51798 805 aa9.43□□□□□ -0.9
MCF2L-227ENST00000486806 THOP1P52888 689 aa9.43□□□□□ -0.9
MCF2L-227ENST00000486806 POU4F1Q01851 419 aa9.43□□□□□ -0.9
MCF2L-227ENST00000486806 GSTM4Q03013 218 aa9.43□□□□□ -0.9
MCF2L-227ENST00000486806 EIF2B5Q13144 721 aaKnown RBP9.43□□□□□ -0.9
MCF2L-227ENST00000486806 GTF2H3Q13889 308 aa9.43□□□□□ -0.9
MCF2L-227ENST00000486806 PTK2BQ14289 1009 aa9.43□□□□□ -0.9
MCF2L-227ENST00000486806 TMED2Q15363 201 aa9.43□□□□□ -0.9
MCF2L-227ENST00000486806 KRT71Q3SY84 523 aa9.43□□□□□ -0.9
MCF2L-227ENST00000486806 PYCR3Q53H96 274 aa9.43□□□□□ -0.9
MCF2L-227ENST00000486806 TNFAIP8L3Q5GJ75 292 aa9.43□□□□□ -0.9
MCF2L-227ENST00000486806 CEP85LQ5SZL2 805 aa9.43□□□□□ -0.9
MCF2L-227ENST00000486806 MROH9Q5TGP6 573 aa9.43□□□□□ -0.9
MCF2L-227ENST00000486806 PTRHD1Q6GMV3 140 aaKnown RBP9.43□□□□□ -0.9
MCF2L-227ENST00000486806 ENPP7Q6UWV6 458 aa9.43□□□□□ -0.9
MCF2L-227ENST00000486806 TIFABQ6ZNK6 161 aa9.43□□□□□ -0.9
MCF2L-227ENST00000486806 PRR23BQ6ZRT6 265 aa9.43□□□□□ -0.9
MCF2L-227ENST00000486806 PIM3Q86V86 326 aa9.43□□□□□ -0.9
MCF2L-227ENST00000486806 LRRTM4Q86VH4 590 aa9.43□□□□□ -0.9
MCF2L-227ENST00000486806 TRAPPC5Q8IUR0 188 aa9.43□□□□□ -0.9
MCF2L-227ENST00000486806 SYT12Q8IV01 421 aa9.43□□□□□ -0.9
MCF2L-227ENST00000486806 CYP4X1Q8N118 509 aa9.43□□□□□ -0.9
MCF2L-227ENST00000486806 BEND7Q8N7W2 519 aaPredicted RBP9.43□□□□□ -0.9
MCF2L-227ENST00000486806 CD200R1Q8TD46 325 aa9.43□□□□□ -0.9
MCF2L-227ENST00000486806 MTBPQ96DY7 904 aa9.43□□□□□ -0.9
MCF2L-227ENST00000486806 LOXL4Q96JB6 756 aa9.43□□□□□ -0.9
MCF2L-227ENST00000486806 ELMO2Q96JJ3 720 aa9.43□□□□□ -0.9
MCF2L-227ENST00000486806 PANX3Q96QZ0 392 aa9.43□□□□□ -0.9
MCF2L-227ENST00000486806 SH3GL2Q99962 352 aa9.43□□□□□ -0.9
MCF2L-227ENST00000486806 CCDC68Q9H2F9 335 aa9.43□□□□□ -0.9
MCF2L-227ENST00000486806 CAB39LQ9H9S4 337 aa9.43□□□□□ -0.9
MCF2L-227ENST00000486806 POPDC3Q9HBV1 291 aa9.43□□□□□ -0.9
MCF2L-227ENST00000486806 MRPL40Q9NQ50 206 aaKnown RBP9.43□□□□□ -0.9
MCF2L-227ENST00000486806 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.43□□□□□ -0.9
MCF2L-227ENST00000486806 KLQ9UEF7 1012 aa9.43□□□□□ -0.9
MCF2L-227ENST00000486806 SUFUQ9UMX1 484 aa9.43□□□□□ -0.9
MCF2L-227ENST00000486806 DNAH14Q0VDD8 3507 aa9.43□□□□□ -0.9
MCF2L-227ENST00000486806 TRIM49D1C9J1S8 452 aa9.42□□□□□ -0.9
MCF2L-227ENST00000486806 F8W8V4 182 aa9.42□□□□□ -0.9
MCF2L-227ENST00000486806 TPP1O14773 563 aa9.42□□□□□ -0.9
MCF2L-227ENST00000486806 GRID2O43424 1007 aa9.42□□□□□ -0.9
MCF2L-227ENST00000486806 MAGEC1O60732 1142 aa9.42□□□□□ -0.9
MCF2L-227ENST00000486806 RFPL1O75677 317 aa9.42□□□□□ -0.9
MCF2L-227ENST00000486806 FTH1P02794 183 aa9.42□□□□□ -0.9
MCF2L-227ENST00000486806 NME1P15531 152 aaKnown RBP9.42□□□□□ -0.9
MCF2L-227ENST00000486806 GNSP15586 552 aa9.42□□□□□ -0.9
MCF2L-227ENST00000486806 AOAHP28039 575 aa9.42□□□□□ -0.9
MCF2L-227ENST00000486806 CTSKP43235 329 aa9.42□□□□□ -0.9
MCF2L-227ENST00000486806 CSNK1EP49674 416 aaKnown RBP9.42□□□□□ -0.9
MCF2L-227ENST00000486806 SERPINB8P50452 374 aa9.42□□□□□ -0.9
MCF2L-227ENST00000486806 HK3P52790 923 aa9.42□□□□□ -0.9
MCF2L-227ENST00000486806 PGGT1BP53609 377 aa9.42□□□□□ -0.9
MCF2L-227ENST00000486806 TAS2R39P59534 338 aa9.42□□□□□ -0.9
MCF2L-227ENST00000486806 SRP54P61011 504 aaKnown RBP9.42□□□□□ -0.9
MCF2L-227ENST00000486806 BNC1Q01954 994 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms