RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 ITIH4Q14624 930 aa12.62□□□□□ -0.39
HDAC6-229ENST00000486665 TRIM61Q5EBN2 209 aa12.62□□□□□ -0.39
HDAC6-229ENST00000486665 AARS2Q5JTZ9 985 aaKnown RBP12.62□□□□□ -0.39
HDAC6-229ENST00000486665 ZNF549Q6P9A3 640 aa12.62□□□□□ -0.39
HDAC6-229ENST00000486665 DOK6Q6PKX4 331 aa12.62□□□□□ -0.39
HDAC6-229ENST00000486665 PACS1Q6VY07 963 aa12.62□□□□□ -0.39
HDAC6-229ENST00000486665 KIAA0408Q6ZU52 694 aa12.62□□□□□ -0.39
HDAC6-229ENST00000486665 DET1Q7L5Y6 550 aa12.62□□□□□ -0.39
HDAC6-229ENST00000486665 SLC26A11Q86WA9 606 aa12.62□□□□□ -0.39
HDAC6-229ENST00000486665 LRRC6Q86X45 466 aa12.62□□□□□ -0.39
HDAC6-229ENST00000486665 PHYKPLQ8IUZ5 450 aa12.62□□□□□ -0.39
HDAC6-229ENST00000486665 SPNS2Q8IVW8 549 aa12.62□□□□□ -0.39
HDAC6-229ENST00000486665 IQCKQ8N0W5 287 aa12.62□□□□□ -0.39
HDAC6-229ENST00000486665 SLC22A18ASQ8N1D0 253 aa12.62□□□□□ -0.39
HDAC6-229ENST00000486665 CLDN19Q8N6F1 224 aa12.62□□□□□ -0.39
HDAC6-229ENST00000486665 RASGEF1AQ8N9B8 481 aa12.62□□□□□ -0.39
HDAC6-229ENST00000486665 MFSD2AQ8NA29 543 aa12.62□□□□□ -0.39
HDAC6-229ENST00000486665 ACVR1CQ8NER5 493 aa12.62□□□□□ -0.39
HDAC6-229ENST00000486665 SLC44A1Q8WWI5 657 aa12.62□□□□□ -0.39
HDAC6-229ENST00000486665 GATA6Q92908 595 aa12.62□□□□□ -0.39
HDAC6-229ENST00000486665 ZBTB9Q96C00 473 aa12.62□□□□□ -0.39
HDAC6-229ENST00000486665 KLHDC7BQ96G42 594 aa12.62□□□□□ -0.39
HDAC6-229ENST00000486665 MCMBPQ9BTE3 642 aa12.62□□□□□ -0.39
HDAC6-229ENST00000486665 SCNM1Q9BWG6 230 aa12.62□□□□□ -0.39
HDAC6-229ENST00000486665 P2RY12Q9H244 342 aa12.62□□□□□ -0.39
HDAC6-229ENST00000486665 GPR27Q9NS67 375 aa12.62□□□□□ -0.39
HDAC6-229ENST00000486665 INTS10Q9NVR2 710 aaKnown RBP12.62□□□□□ -0.39
HDAC6-229ENST00000486665 ARGLU1Q9NWB6 273 aaPredicted RBP12.62□□□□□ -0.39
HDAC6-229ENST00000486665 PILRBQ9UKJ0 227 aa12.62□□□□□ -0.39
HDAC6-229ENST00000486665 PNMA8BQ9ULN7 279 aaPredicted RBP12.62□□□□□ -0.39
HDAC6-229ENST00000486665 CRYL1Q9Y2S2 319 aa12.62□□□□□ -0.39
HDAC6-229ENST00000486665 ATRXP46100 2492 aa12.61□□□□□ -0.39
HDAC6-229ENST00000486665 EXOC1LA0A1B0GW35 172 aa12.61□□□□□ -0.39
HDAC6-229ENST00000486665 TLR4O00206 839 aa12.61□□□□□ -0.39
HDAC6-229ENST00000486665 BCAT2O15382 392 aaPredicted RBP12.61□□□□□ -0.39
HDAC6-229ENST00000486665 NUDT17P0C025 328 aa12.61□□□□□ -0.39
HDAC6-229ENST00000486665 CEACAM1P13688 526 aa12.61□□□□□ -0.39
HDAC6-229ENST00000486665 ATP1B2P14415 290 aaPredicted RBP12.61□□□□□ -0.39
HDAC6-229ENST00000486665 MSH3P20585 1137 aa12.61□□□□□ -0.39
HDAC6-229ENST00000486665 CSRP1P21291 193 aaKnown RBP12.61□□□□□ -0.39
HDAC6-229ENST00000486665 AKT1P31749 480 aa12.61□□□□□ -0.39
HDAC6-229ENST00000486665 MSH2P43246 934 aa12.61□□□□□ -0.39
HDAC6-229ENST00000486665 CSNK1EP49674 416 aaKnown RBP12.61□□□□□ -0.39
HDAC6-229ENST00000486665 CTSCP53634 463 aa12.61□□□□□ -0.39
HDAC6-229ENST00000486665 NAB1Q13506 487 aa12.61□□□□□ -0.39
HDAC6-229ENST00000486665 NFATC4Q14934 902 aa12.61□□□□□ -0.39
HDAC6-229ENST00000486665 KLHL38Q2WGJ6 581 aa12.61□□□□□ -0.39
HDAC6-229ENST00000486665 ENPP7Q6UWV6 458 aa12.61□□□□□ -0.39
HDAC6-229ENST00000486665 SPATS2Q86XZ4 545 aaKnown RBP12.61□□□□□ -0.39
HDAC6-229ENST00000486665 KDF1Q8NAX2 398 aaPredicted RBP12.61□□□□□ -0.39
HDAC6-229ENST00000486665 DCAKDQ8WVC6 231 aa12.61□□□□□ -0.39
HDAC6-229ENST00000486665 SCG3Q8WXD2 468 aaKnown RBP12.61□□□□□ -0.39
HDAC6-229ENST00000486665 ANKRD7Q92527 254 aa12.61□□□□□ -0.39
HDAC6-229ENST00000486665 SGF29Q96ES7 293 aa12.61□□□□□ -0.39
HDAC6-229ENST00000486665 DCUN1D1Q96GG9 259 aa12.61□□□□□ -0.39
HDAC6-229ENST00000486665 BIRC8Q96P09 236 aa12.61□□□□□ -0.39
HDAC6-229ENST00000486665 PAFAH2Q99487 392 aa12.61□□□□□ -0.39
HDAC6-229ENST00000486665 TTC1Q99614 292 aa12.61□□□□□ -0.39
HDAC6-229ENST00000486665 CPNE1Q99829 537 aa12.61□□□□□ -0.39
HDAC6-229ENST00000486665 DHRS4Q9BTZ2 278 aa12.61□□□□□ -0.39
HDAC6-229ENST00000486665 MRPL40Q9NQ50 206 aaKnown RBP12.61□□□□□ -0.39
HDAC6-229ENST00000486665 PLAAQ9Y263 795 aa12.61□□□□□ -0.39
HDAC6-229ENST00000486665 SLC17A4Q9Y2C5 497 aa12.61□□□□□ -0.39
HDAC6-229ENST00000486665 FREM2Q5SZK8 3169 aa12.61□□□□□ -0.39
HDAC6-229ENST00000486665 PLXNB3Q9ULL4 1909 aa12.6□□□□□ -0.39
HDAC6-229ENST00000486665 A0A1B0GTW7 788 aa12.6□□□□□ -0.39
HDAC6-229ENST00000486665 SPAARA0A1B0GVQ0 90 aa12.6□□□□□ -0.39
HDAC6-229ENST00000486665 UBA6A0AVT1 1052 aaPredicted RBP12.6□□□□□ -0.39
HDAC6-229ENST00000486665 HMX2A2RU54 273 aa12.6□□□□□ -0.39
HDAC6-229ENST00000486665 IQCF5A8MTL0 148 aa12.6□□□□□ -0.39
HDAC6-229ENST00000486665 TOR1BO14657 336 aa12.6□□□□□ -0.39
HDAC6-229ENST00000486665 PRMT5O14744 637 aaPredicted RBP12.6□□□□□ -0.39
HDAC6-229ENST00000486665 VEGFDO43915 354 aa12.6□□□□□ -0.39
HDAC6-229ENST00000486665 CDK14O94921 469 aa12.6□□□□□ -0.39
HDAC6-229ENST00000486665 ZNF7P17097 686 aaPredicted RBP12.6□□□□□ -0.39
HDAC6-229ENST00000486665 ENGP17813 658 aa12.6□□□□□ -0.39
HDAC6-229ENST00000486665 PPARGP37231 505 aaPredicted RBP12.6□□□□□ -0.39
HDAC6-229ENST00000486665 GP5P40197 560 aa12.6□□□□□ -0.39
HDAC6-229ENST00000486665 NSG1P42857 185 aa12.6□□□□□ -0.39
HDAC6-229ENST00000486665 CD151P48509 253 aa12.6□□□□□ -0.39
HDAC6-229ENST00000486665 CSE1LP55060 971 aaKnown RBP12.6□□□□□ -0.39
HDAC6-229ENST00000486665 EIF3BP55884 814 aaKnown RBP12.6□□□□□ -0.39
HDAC6-229ENST00000486665 BNC1Q01954 994 aa12.6□□□□□ -0.39
HDAC6-229ENST00000486665 EIF2B5Q13144 721 aaKnown RBP12.6□□□□□ -0.39
HDAC6-229ENST00000486665 FZD2Q14332 565 aa12.6□□□□□ -0.39
HDAC6-229ENST00000486665 CASP8Q14790 479 aa12.6□□□□□ -0.39
HDAC6-229ENST00000486665 CTSL3PQ5NE16 218 aa12.6□□□□□ -0.39
HDAC6-229ENST00000486665 RBM20Q5T481 1227 aaKnown RBP12.6□□□□□ -0.39
HDAC6-229ENST00000486665 RNF187Q5TA31 235 aaPredicted RBP12.6□□□□□ -0.39
HDAC6-229ENST00000486665 GRTP1Q5TC63 336 aa12.6□□□□□ -0.39
HDAC6-229ENST00000486665 PEAR1Q5VY43 1037 aaPredicted RBP12.6□□□□□ -0.39
HDAC6-229ENST00000486665 TMEM220Q6QAJ8 160 aa12.6□□□□□ -0.39
HDAC6-229ENST00000486665 GALNT7Q86SF2 657 aa12.6□□□□□ -0.39
HDAC6-229ENST00000486665 IQCHQ86VS3 1027 aa12.6□□□□□ -0.39
HDAC6-229ENST00000486665 ZC3HC1Q86WB0 502 aaKnown RBP12.6□□□□□ -0.39
HDAC6-229ENST00000486665 RBFAQ8N0V3 343 aa12.6□□□□□ -0.39
HDAC6-229ENST00000486665 OR2I1PQ8NGU4 316 aa12.6□□□□□ -0.39
HDAC6-229ENST00000486665 GABPB2Q8TAK5 448 aaPredicted RBP12.6□□□□□ -0.39
HDAC6-229ENST00000486665 FAM174AQ8TBP5 190 aa12.6□□□□□ -0.39
HDAC6-229ENST00000486665 HEXDCQ8WVB3 486 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms