RNA–Protein interactions for RNA: ENST00000486530.1

HPS3-206, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 5

Gene HPS3, Length 1,894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-206ENST00000486530 ACADVLP49748 655 aa20.11■□□□□ 0.81
HPS3-206ENST00000486530 IRX1P78414 480 aaPredicted RBP20.11■□□□□ 0.81
HPS3-206ENST00000486530 CCNIQ14094 377 aa20.11■□□□□ 0.81
HPS3-206ENST00000486530 TAF11Q15544 211 aa20.11■□□□□ 0.81
HPS3-206ENST00000486530 AGKQ53H12 422 aa20.11■□□□□ 0.81
HPS3-206ENST00000486530 TCHHL1Q5QJ38 904 aaPredicted RBP20.11■□□□□ 0.81
HPS3-206ENST00000486530 GRASPQ7Z6J2 395 aaPredicted RBP20.11■□□□□ 0.81
HPS3-206ENST00000486530 DDIASQ8IXT1 998 aa20.11■□□□□ 0.81
HPS3-206ENST00000486530 LKAAEAR1Q8TD35 194 aa20.11■□□□□ 0.81
HPS3-206ENST00000486530 ZNF707Q96C28 371 aaPredicted RBP20.11■□□□□ 0.81
HPS3-206ENST00000486530 PLEKHG4BQ96PX9 1271 aa20.11■□□□□ 0.81
HPS3-206ENST00000486530 KCNA7Q96RP8 456 aa20.11■□□□□ 0.81
HPS3-206ENST00000486530 HGH1Q9BTY7 390 aa20.11■□□□□ 0.81
HPS3-206ENST00000486530 SLC25A23Q9BV35 468 aa20.11■□□□□ 0.81
HPS3-206ENST00000486530 S100A14Q9HCY8 104 aa20.11■□□□□ 0.81
HPS3-206ENST00000486530 WNT6Q9Y6F9 365 aa20.11■□□□□ 0.81
HPS3-206ENST00000486530 E2F3O00716 465 aa20.1■□□□□ 0.81
HPS3-206ENST00000486530 NVLO15381 856 aaKnown RBP20.1■□□□□ 0.81
HPS3-206ENST00000486530 SLC25A14O95258 325 aaPredicted RBP20.1■□□□□ 0.81
HPS3-206ENST00000486530 S100BP04271 92 aaPredicted RBP20.1■□□□□ 0.81
HPS3-206ENST00000486530 POLR2EP19388 210 aaKnown RBP20.1■□□□□ 0.81
HPS3-206ENST00000486530 LHCGRP22888 699 aa20.1■□□□□ 0.81
HPS3-206ENST00000486530 POLR2LP62875 67 aaKnown RBP20.1■□□□□ 0.81
HPS3-206ENST00000486530 CRY1Q16526 586 aa20.1■□□□□ 0.81
HPS3-206ENST00000486530 RBBP7Q16576 425 aa20.1■□□□□ 0.81
HPS3-206ENST00000486530 CMPK2Q5EBM0 449 aa20.1■□□□□ 0.81
HPS3-206ENST00000486530 FBXO48Q5FWF7 155 aa20.1■□□□□ 0.81
HPS3-206ENST00000486530 SBSNQ6UWP8 590 aa20.1■□□□□ 0.81
HPS3-206ENST00000486530 GDPD4Q6W3E5 623 aa20.1■□□□□ 0.81
HPS3-206ENST00000486530 ADGRD2Q7Z7M1 963 aa20.1■□□□□ 0.81
HPS3-206ENST00000486530 RBM23Q86U06 439 aaKnown RBP20.1■□□□□ 0.81
HPS3-206ENST00000486530 ADGRG2Q8IZP9 1017 aa20.1■□□□□ 0.81
HPS3-206ENST00000486530 ZBTB2Q8N680 514 aa20.1■□□□□ 0.81
HPS3-206ENST00000486530 NRG4Q8WWG1 115 aa20.1■□□□□ 0.81
HPS3-206ENST00000486530 ZNF570Q96NI8 536 aa20.1■□□□□ 0.81
HPS3-206ENST00000486530 NPAS2Q99743 824 aa20.1■□□□□ 0.81
HPS3-206ENST00000486530 TUBB1Q9H4B7 451 aa20.1■□□□□ 0.81
HPS3-206ENST00000486530 EIF2B4Q9UI10 523 aaKnown RBP20.1■□□□□ 0.81
HPS3-206ENST00000486530 ERVW-1Q9UQF0 538 aa20.1■□□□□ 0.81
HPS3-206ENST00000486530 TNPO3Q9Y5L0 923 aaKnown RBP20.1■□□□□ 0.81
HPS3-206ENST00000486530 HCFC2Q9Y5Z7 792 aa20.1■□□□□ 0.81
HPS3-206ENST00000486530 RAD51BO15315 384 aa20.09■□□□□ 0.81
HPS3-206ENST00000486530 TRIM16O95361 564 aa20.09■□□□□ 0.81
HPS3-206ENST00000486530 CHEK2O96017 543 aa20.09■□□□□ 0.81
HPS3-206ENST00000486530 SNRPB2P08579 225 aaKnown RBP20.09■□□□□ 0.81
HPS3-206ENST00000486530 ALDOCP09972 364 aaKnown RBP20.09■□□□□ 0.81
HPS3-206ENST00000486530 UROSP10746 265 aa20.09■□□□□ 0.81
HPS3-206ENST00000486530 CEBPBP17676 345 aa20.09■□□□□ 0.81
HPS3-206ENST00000486530 PBX2P40425 430 aa20.09■□□□□ 0.81
HPS3-206ENST00000486530 NSG1P42857 185 aa20.09■□□□□ 0.81
HPS3-206ENST00000486530 PTSQ03393 145 aa20.09■□□□□ 0.81
HPS3-206ENST00000486530 MUM1Q2TAK8 710 aa20.09■□□□□ 0.81
HPS3-206ENST00000486530 PIGGQ5H8A4 983 aa20.09■□□□□ 0.81
HPS3-206ENST00000486530 FAM219BQ5XKK7 198 aa20.09■□□□□ 0.81
HPS3-206ENST00000486530 ADGRG6Q86SQ4 1221 aa20.09■□□□□ 0.81
HPS3-206ENST00000486530 SYVN1Q86TM6 617 aa20.09■□□□□ 0.81
HPS3-206ENST00000486530 PHYKPLQ8IUZ5 450 aa20.09■□□□□ 0.81
HPS3-206ENST00000486530 CLDN19Q8N6F1 224 aa20.09■□□□□ 0.81
HPS3-206ENST00000486530 CHST14Q8NCH0 376 aa20.09■□□□□ 0.81
HPS3-206ENST00000486530 PPFIBP2Q8ND30 876 aa20.09■□□□□ 0.81
HPS3-206ENST00000486530 OR2A12Q8NGT7 310 aa20.09■□□□□ 0.81
HPS3-206ENST00000486530 PBXIP1Q96AQ6 731 aa20.09■□□□□ 0.81
HPS3-206ENST00000486530 ZSWIM3Q96MP5 696 aa20.09■□□□□ 0.81
HPS3-206ENST00000486530 ZNF382Q96SR6 550 aa20.09■□□□□ 0.81
HPS3-206ENST00000486530 CDRT15Q96T59 188 aa20.09■□□□□ 0.81
HPS3-206ENST00000486530 BRD9Q9H8M2 597 aa20.09■□□□□ 0.81
HPS3-206ENST00000486530 PFDN4Q9NQP4 134 aa20.09■□□□□ 0.81
HPS3-206ENST00000486530 NMRK1Q9NWW6 199 aa20.09■□□□□ 0.81
HPS3-206ENST00000486530 ZDHHC3Q9NYG2 299 aa20.09■□□□□ 0.81
HPS3-206ENST00000486530 CCDC167Q9P0B6 97 aa20.09■□□□□ 0.81
HPS3-206ENST00000486530 POLG2Q9UHN1 485 aa20.09■□□□□ 0.81
HPS3-206ENST00000486530 CHD9Q3L8U1 2897 aa20.09■□□□□ 0.81
HPS3-206ENST00000486530 A0A1B0GTL3 188 aa20.09■□□□□ 0.81
HPS3-206ENST00000486530 RPSAP08865 295 aaKnown RBP20.09■□□□□ 0.81
HPS3-206ENST00000486530 ITGB6P18564 788 aa20.09■□□□□ 0.81
HPS3-206ENST00000486530 PKNOX1P55347 436 aa20.09■□□□□ 0.81
HPS3-206ENST00000486530 PCBP2Q15366 365 aaKnown RBP eCLIP20.09■□□□□ 0.81
HPS3-206ENST00000486530 EML3Q32P44 896 aa20.09■□□□□ 0.81
HPS3-206ENST00000486530 TTLL9Q3SXZ7 439 aa20.09■□□□□ 0.81
HPS3-206ENST00000486530 MMEL1Q495T6 779 aa20.09■□□□□ 0.81
HPS3-206ENST00000486530 GPRC6AQ5T6X5 926 aa20.09■□□□□ 0.81
HPS3-206ENST00000486530 REP15Q6BDI9 236 aa20.09■□□□□ 0.81
HPS3-206ENST00000486530 BRAT1Q6PJG6 821 aa20.09■□□□□ 0.81
HPS3-206ENST00000486530 GPRIN3Q6ZVF9 776 aa20.09■□□□□ 0.81
HPS3-206ENST00000486530 EFCAB3Q8N7B9 438 aa20.09■□□□□ 0.81
HPS3-206ENST00000486530 PDPRQ8NCN5 879 aa20.09■□□□□ 0.81
HPS3-206ENST00000486530 SLC26A7Q8TE54 656 aa20.09■□□□□ 0.81
HPS3-206ENST00000486530 ULK4Q96C45 1275 aa20.09■□□□□ 0.81
HPS3-206ENST00000486530 TUBGCP3Q96CW5 907 aa20.09■□□□□ 0.81
HPS3-206ENST00000486530 FAM126AQ9BYI3 521 aaPredicted RBP20.09■□□□□ 0.81
HPS3-206ENST00000486530 CERS4Q9HA82 394 aa20.09■□□□□ 0.81
HPS3-206ENST00000486530 FBRSL1Q9HCM7 1045 aaKnown RBP20.09■□□□□ 0.81
HPS3-206ENST00000486530 SPATS2LQ9NUQ6 558 aaKnown RBP20.09■□□□□ 0.81
HPS3-206ENST00000486530 OARD1Q9Y530 152 aa20.09■□□□□ 0.81
HPS3-206ENST00000486530 PTGDR2Q9Y5Y4 395 aa20.09■□□□□ 0.81
HPS3-206ENST00000486530 LBPP18428 481 aa20.08■□□□□ 0.81
HPS3-206ENST00000486530 ERFP50548 548 aa20.08■□□□□ 0.81
HPS3-206ENST00000486530 SEMG2Q02383 582 aa20.08■□□□□ 0.81
HPS3-206ENST00000486530 ZNF423Q2M1K9 1284 aa20.08■□□□□ 0.81
HPS3-206ENST00000486530 KIF19Q2TAC6 998 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms