RNA–Protein interactions for RNA: ENST00000486254.3

PKP4-213, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 1,566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-213ENST00000486254 KCNC3Q14003 757 aa11.81□□□□□ -0.52
PKP4-213ENST00000486254 PTPRRQ15256 657 aa11.81□□□□□ -0.52
PKP4-213ENST00000486254 GSTA3Q16772 222 aa11.81□□□□□ -0.52
PKP4-213ENST00000486254 EML3Q32P44 896 aa11.81□□□□□ -0.52
PKP4-213ENST00000486254 ACCSLQ4AC99 568 aa11.81□□□□□ -0.52
PKP4-213ENST00000486254 KHDC1Q4VXA5 237 aaKnown RBP11.81□□□□□ -0.52
PKP4-213ENST00000486254 XKR7Q5GH72 579 aa11.81□□□□□ -0.52
PKP4-213ENST00000486254 COQ5Q5HYK3 327 aa11.81□□□□□ -0.52
PKP4-213ENST00000486254 TMEM215Q68D42 235 aa11.81□□□□□ -0.52
PKP4-213ENST00000486254 RIPOR1Q6ZS17 1223 aa11.81□□□□□ -0.52
PKP4-213ENST00000486254 NEK10Q6ZWH5 1172 aa11.81□□□□□ -0.52
PKP4-213ENST00000486254 TSPAN33Q86UF1 283 aa11.81□□□□□ -0.52
PKP4-213ENST00000486254 PHYKPLQ8IUZ5 450 aa11.81□□□□□ -0.52
PKP4-213ENST00000486254 DEFB107AQ8IZN7 70 aa11.81□□□□□ -0.52
PKP4-213ENST00000486254 TTC16Q8NEE8 873 aa11.81□□□□□ -0.52
PKP4-213ENST00000486254 TWIST2Q8WVJ9 160 aa11.81□□□□□ -0.52
PKP4-213ENST00000486254 TIFAQ96CG3 184 aa11.81□□□□□ -0.52
PKP4-213ENST00000486254 ZSWIM3Q96MP5 696 aa11.81□□□□□ -0.52
PKP4-213ENST00000486254 CATSPER2Q96P56 530 aa11.81□□□□□ -0.52
PKP4-213ENST00000486254 SLC25A23Q9BV35 468 aa11.81□□□□□ -0.52
PKP4-213ENST00000486254 FAM126AQ9BYI3 521 aaPredicted RBP11.81□□□□□ -0.52
PKP4-213ENST00000486254 SHCBP1LQ9BZQ2 653 aa11.81□□□□□ -0.52
PKP4-213ENST00000486254 ACSS2Q9NR19 701 aa11.81□□□□□ -0.52
PKP4-213ENST00000486254 GDE1Q9NZC3 331 aa11.81□□□□□ -0.52
PKP4-213ENST00000486254 GALPQ9UBC7 116 aa11.81□□□□□ -0.52
PKP4-213ENST00000486254 B4GALT6Q9UBX8 382 aa11.81□□□□□ -0.52
PKP4-213ENST00000486254 BCAP29Q9UHQ4 241 aa11.81□□□□□ -0.52
PKP4-213ENST00000486254 SLCO3A1Q9UIG8 710 aa11.81□□□□□ -0.52
PKP4-213ENST00000486254 SARDHQ9UL12 918 aa11.81□□□□□ -0.52
PKP4-213ENST00000486254 C15orf41Q9Y2V0 281 aa11.81□□□□□ -0.52
PKP4-213ENST00000486254 WNT6Q9Y6F9 365 aa11.81□□□□□ -0.52
PKP4-213ENST00000486254 MEI4A8MW99 385 aa11.8□□□□□ -0.52
PKP4-213ENST00000486254 GIPC1O14908 333 aa11.8□□□□□ -0.52
PKP4-213ENST00000486254 GPC4O75487 556 aa11.8□□□□□ -0.52
PKP4-213ENST00000486254 ARHGEF15O94989 841 aa11.8□□□□□ -0.52
PKP4-213ENST00000486254 S100BP04271 92 aaPredicted RBP11.8□□□□□ -0.52
PKP4-213ENST00000486254 C1SP09871 688 aa11.8□□□□□ -0.52
PKP4-213ENST00000486254 PCSK2P16519 638 aa11.8□□□□□ -0.52
PKP4-213ENST00000486254 PIK3CGP48736 1102 aa11.8□□□□□ -0.52
PKP4-213ENST00000486254 DGKGP49619 791 aa11.8□□□□□ -0.52
PKP4-213ENST00000486254 HK3P52790 923 aa11.8□□□□□ -0.52
PKP4-213ENST00000486254 STX1BP61266 288 aa11.8□□□□□ -0.52
PKP4-213ENST00000486254 NTHL1P78549 312 aa11.8□□□□□ -0.52
PKP4-213ENST00000486254 SP140Q13342 867 aa11.8□□□□□ -0.52
PKP4-213ENST00000486254 ARHGEF7Q14155 803 aa11.8□□□□□ -0.52
PKP4-213ENST00000486254 SPATS1Q496A3 300 aa11.8□□□□□ -0.52
PKP4-213ENST00000486254 ZNF805Q5CZA5 627 aa11.8□□□□□ -0.52
PKP4-213ENST00000486254 C1orf146Q5VVC0 180 aa11.8□□□□□ -0.52
PKP4-213ENST00000486254 TMEM198Q66K66 360 aa11.8□□□□□ -0.52
PKP4-213ENST00000486254 CHRDL2Q6WN34 429 aa11.8□□□□□ -0.52
PKP4-213ENST00000486254 GPRIN3Q6ZVF9 776 aa11.8□□□□□ -0.52
PKP4-213ENST00000486254 DPPA4Q7L190 304 aa11.8□□□□□ -0.52
PKP4-213ENST00000486254 SPATA19Q7Z5L4 167 aa11.8□□□□□ -0.52
PKP4-213ENST00000486254 FBXW8Q8N3Y1 598 aa11.8□□□□□ -0.52
PKP4-213ENST00000486254 EXT2Q93063 718 aa11.8□□□□□ -0.52
PKP4-213ENST00000486254 SDR39U1Q9NRG7 319 aaPredicted RBP11.8□□□□□ -0.52
PKP4-213ENST00000486254 DUS2Q9NX74 493 aaKnown RBP11.8□□□□□ -0.52
PKP4-213ENST00000486254 CD274Q9NZQ7 290 aa11.8□□□□□ -0.52
PKP4-213ENST00000486254 PTBP2Q9UKA9 531 aaKnown RBP11.8□□□□□ -0.52
PKP4-213ENST00000486254 ANGPTL2Q9UKU9 493 aa11.8□□□□□ -0.52
PKP4-213ENST00000486254 L3MBTL1Q9Y468 752 aa11.8□□□□□ -0.52
PKP4-213ENST00000486254 C2orf16Q68DN1 1984 aa11.8□□□□□ -0.52
PKP4-213ENST00000486254 LOC100653049A0A140TA62 436 aa11.79□□□□□ -0.52
PKP4-213ENST00000486254 CFAP99D6REC4 459 aa11.79□□□□□ -0.52
PKP4-213ENST00000486254 H0Y858 1186 aa11.79□□□□□ -0.52
PKP4-213ENST00000486254 PSMD12O00232 456 aaPredicted RBP11.79□□□□□ -0.52
PKP4-213ENST00000486254 FFAR2O15552 330 aa11.79□□□□□ -0.52
PKP4-213ENST00000486254 NUAK1O60285 661 aa11.79□□□□□ -0.52
PKP4-213ENST00000486254 KRT34O76011 436 aa11.79□□□□□ -0.52
PKP4-213ENST00000486254 SLC25A14O95258 325 aaPredicted RBP11.79□□□□□ -0.52
PKP4-213ENST00000486254 ANP32DO95626 131 aa11.79□□□□□ -0.52
PKP4-213ENST00000486254 CA3P07451 260 aa11.79□□□□□ -0.52
PKP4-213ENST00000486254 OR56A5P0C7T3 313 aa11.79□□□□□ -0.52
PKP4-213ENST00000486254 IDO1P14902 403 aa11.79□□□□□ -0.52
PKP4-213ENST00000486254 VCLP18206 1134 aa11.79□□□□□ -0.52
PKP4-213ENST00000486254 LBPP18428 481 aa11.79□□□□□ -0.52
PKP4-213ENST00000486254 NUDT2P50583 147 aa11.79□□□□□ -0.52
PKP4-213ENST00000486254 CDH13P55290 713 aa11.79□□□□□ -0.52
PKP4-213ENST00000486254 AP2B1P63010 937 aa11.79□□□□□ -0.52
PKP4-213ENST00000486254 SLC34A1Q06495 639 aa11.79□□□□□ -0.52
PKP4-213ENST00000486254 FASTKQ14296 549 aaKnown RBP11.79□□□□□ -0.52
PKP4-213ENST00000486254 PDGFRLQ15198 375 aa11.79□□□□□ -0.52
PKP4-213ENST00000486254 RCN1Q15293 331 aa11.79□□□□□ -0.52
PKP4-213ENST00000486254 GEN1Q17RS7 908 aa11.79□□□□□ -0.52
PKP4-213ENST00000486254 SMU1Q2TAY7 513 aa11.79□□□□□ -0.52
PKP4-213ENST00000486254 CLEC6AQ6EIG7 209 aa11.79□□□□□ -0.52
PKP4-213ENST00000486254 SULT1C3Q6IMI6 304 aa11.79□□□□□ -0.52
PKP4-213ENST00000486254 BNC2Q6ZN30 1099 aaPredicted RBP11.79□□□□□ -0.52
PKP4-213ENST00000486254 FRA10AC1Q70Z53 315 aa11.79□□□□□ -0.52
PKP4-213ENST00000486254 NPAS3Q8IXF0 933 aa11.79□□□□□ -0.52
PKP4-213ENST00000486254 NRSN1Q8IZ57 195 aa11.79□□□□□ -0.52
PKP4-213ENST00000486254 DSELQ8IZU8 1212 aa11.79□□□□□ -0.52
PKP4-213ENST00000486254 TRAM1L1Q8N609 369 aa11.79□□□□□ -0.52
PKP4-213ENST00000486254 CHST14Q8NCH0 376 aa11.79□□□□□ -0.52
PKP4-213ENST00000486254 DDHD1Q8NEL9 900 aa11.79□□□□□ -0.52
PKP4-213ENST00000486254 BPIFB1Q8TDL5 484 aa11.79□□□□□ -0.52
PKP4-213ENST00000486254 TRPC4APQ8TEL6 797 aa11.79□□□□□ -0.52
PKP4-213ENST00000486254 SMARCD2Q92925 531 aa11.79□□□□□ -0.52
PKP4-213ENST00000486254 FAM136AQ96C01 138 aa11.79□□□□□ -0.52
PKP4-213ENST00000486254 ROPN1LQ96C74 230 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms