RNA–Protein interactions for RNA: ENST00000486016.1

GCFC2-209, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 3

Gene GCFC2, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-209ENST00000486016 RTP3Q9BQQ7 232 aa3.46□□□□□ -1.86
GCFC2-209ENST00000486016 MCRIP2Q9BUT9 160 aaKnown RBP3.46□□□□□ -1.86
GCFC2-209ENST00000486016 SLC25A18Q9H1K4 315 aa3.46□□□□□ -1.86
GCFC2-209ENST00000486016 SCPEP1Q9HB40 452 aa3.46□□□□□ -1.86
GCFC2-209ENST00000486016 PCDHB16Q9NRJ7 776 aa3.46□□□□□ -1.86
GCFC2-209ENST00000486016 SLC38A7Q9NVC3 462 aa3.46□□□□□ -1.86
GCFC2-209ENST00000486016 NAALADL1Q9UQQ1 740 aa3.46□□□□□ -1.86
GCFC2-209ENST00000486016 ADAMTS9Q9P2N4 1935 aa3.45□□□□□ -1.86
GCFC2-209ENST00000486016 EIF4E1BA6NMX2 242 aaKnown RBP3.45□□□□□ -1.86
GCFC2-209ENST00000486016 E9PQ18 207 aa3.45□□□□□ -1.86
GCFC2-209ENST00000486016 CLIC2O15247 247 aa3.45□□□□□ -1.86
GCFC2-209ENST00000486016 PAGE4O60829 102 aa3.45□□□□□ -1.86
GCFC2-209ENST00000486016 ICAM1P05362 532 aa3.45□□□□□ -1.86
GCFC2-209ENST00000486016 GATA1P15976 413 aaPredicted RBP3.45□□□□□ -1.86
GCFC2-209ENST00000486016 GNAZP19086 355 aa3.45□□□□□ -1.86
GCFC2-209ENST00000486016 ABCD3P28288 659 aa3.45□□□□□ -1.86
GCFC2-209ENST00000486016 ICAM3P32942 547 aa3.45□□□□□ -1.86
GCFC2-209ENST00000486016 WNT5AP41221 380 aa3.45□□□□□ -1.86
GCFC2-209ENST00000486016 MMP15P51511 669 aa3.45□□□□□ -1.86
GCFC2-209ENST00000486016 CTSCP53634 463 aa3.45□□□□□ -1.86
GCFC2-209ENST00000486016 DCTN2Q13561 401 aaKnown RBP3.45□□□□□ -1.86
GCFC2-209ENST00000486016 PNLIPRP3Q17RR3 467 aa3.45□□□□□ -1.86
GCFC2-209ENST00000486016 CDC73Q6P1J9 531 aa3.45□□□□□ -1.86
GCFC2-209ENST00000486016 TSSK4Q6SA08 328 aa3.45□□□□□ -1.86
GCFC2-209ENST00000486016 ZNF843Q8N446 348 aa3.45□□□□□ -1.86
GCFC2-209ENST00000486016 SLC5A8Q8N695 610 aa3.45□□□□□ -1.86
GCFC2-209ENST00000486016 ZNF611Q8N823 705 aa3.45□□□□□ -1.86
GCFC2-209ENST00000486016 AMER3Q8N944 861 aa3.45□□□□□ -1.86
GCFC2-209ENST00000486016 ANKRD52Q8NB46 1076 aa3.45□□□□□ -1.86
GCFC2-209ENST00000486016 FGFBP3Q8TAT2 258 aa3.45□□□□□ -1.86
GCFC2-209ENST00000486016 HM13Q8TCT9 377 aa3.45□□□□□ -1.86
GCFC2-209ENST00000486016 HTRA1Q92743 480 aa3.45□□□□□ -1.86
GCFC2-209ENST00000486016 MMABQ96EY8 250 aaPredicted RBP3.45□□□□□ -1.86
GCFC2-209ENST00000486016 PRAC1Q96KF2 57 aa3.45□□□□□ -1.86
GCFC2-209ENST00000486016 SMC6Q96SB8 1091 aa3.45□□□□□ -1.86
GCFC2-209ENST00000486016 GFI1Q99684 422 aa3.45□□□□□ -1.86
GCFC2-209ENST00000486016 RANBP17Q9H2T7 1088 aaKnown RBP3.45□□□□□ -1.86
GCFC2-209ENST00000486016 PIGMQ9H3S5 423 aa3.45□□□□□ -1.86
GCFC2-209ENST00000486016 INTS10Q9NVR2 710 aaKnown RBP3.45□□□□□ -1.86
GCFC2-209ENST00000486016 A0A1W2PQF6 199 aa3.44□□□□□ -1.86
GCFC2-209ENST00000486016 PLOD2O00469 737 aa3.44□□□□□ -1.86
GCFC2-209ENST00000486016 ATP2A1O14983 1001 aa3.44□□□□□ -1.86
GCFC2-209ENST00000486016 SRSF10O75494 262 aaKnown RBP3.44□□□□□ -1.86
GCFC2-209ENST00000486016 FRMD6-AS1P0C7T7 363 aa3.44□□□□□ -1.86
GCFC2-209ENST00000486016 CTCFP49711 727 aaPredicted RBP3.44□□□□□ -1.86
GCFC2-209ENST00000486016 TAF12Q16514 161 aa3.44□□□□□ -1.86
GCFC2-209ENST00000486016 SNAI3Q3KNW1 292 aa3.44□□□□□ -1.86
GCFC2-209ENST00000486016 EMC1Q8N766 993 aa3.44□□□□□ -1.86
GCFC2-209ENST00000486016 SLC47A1Q96FL8 570 aa3.44□□□□□ -1.86
GCFC2-209ENST00000486016 PELI2Q9HAT8 420 aa3.44□□□□□ -1.86
GCFC2-209ENST00000486016 MTMR10Q9NXD2 777 aa3.44□□□□□ -1.86
GCFC2-209ENST00000486016 EXOGQ9Y2C4 368 aaKnown RBP3.44□□□□□ -1.86
GCFC2-209ENST00000486016 YIPF1Q9Y548 306 aa3.44□□□□□ -1.86
GCFC2-209ENST00000486016 DGKBQ9Y6T7 804 aa3.44□□□□□ -1.86
GCFC2-209ENST00000486016 MAU2Q9Y6X3 613 aa3.44□□□□□ -1.86
GCFC2-209ENST00000486016 SLCO1B7G3V0H7 640 aa3.43□□□□□ -1.86
GCFC2-209ENST00000486016 PLK4O00444 970 aa3.43□□□□□ -1.86
GCFC2-209ENST00000486016 GCNT3O95395 438 aa3.43□□□□□ -1.86
GCFC2-209ENST00000486016 CEBPBP17676 345 aa3.43□□□□□ -1.86
GCFC2-209ENST00000486016 TYMPP19971 482 aa3.43□□□□□ -1.86
GCFC2-209ENST00000486016 GATA2P23769 480 aaPredicted RBP3.43□□□□□ -1.86
GCFC2-209ENST00000486016 PAFAH1B1P43034 410 aa3.43□□□□□ -1.86
GCFC2-209ENST00000486016 F2RL1P55085 397 aa3.43□□□□□ -1.86
GCFC2-209ENST00000486016 PDE1CQ14123 709 aaPredicted RBP3.43□□□□□ -1.86
GCFC2-209ENST00000486016 SDCCAG8Q86SQ7 713 aaPredicted RBP3.43□□□□□ -1.86
GCFC2-209ENST00000486016 PTOV1Q86YD1 416 aa3.43□□□□□ -1.86
GCFC2-209ENST00000486016 PLD3Q8IV08 490 aa3.43□□□□□ -1.86
GCFC2-209ENST00000486016 OR2T12Q8NG77 320 aa3.43□□□□□ -1.86
GCFC2-209ENST00000486016 OR2T6Q8NHC8 308 aa3.43□□□□□ -1.86
GCFC2-209ENST00000486016 SMPDL3BQ92485 455 aa3.43□□□□□ -1.86
GCFC2-209ENST00000486016 TRIM63Q969Q1 353 aa3.43□□□□□ -1.86
GCFC2-209ENST00000486016 MAP7D2Q96T17 732 aa3.43□□□□□ -1.86
GCFC2-209ENST00000486016 SEMA3CQ99985 751 aa3.43□□□□□ -1.86
GCFC2-209ENST00000486016 TMEM39BQ9GZU3 492 aa3.43□□□□□ -1.86
GCFC2-209ENST00000486016 CCDC177Q9NQR7 707 aaPredicted RBP3.43□□□□□ -1.86
GCFC2-209ENST00000486016 PTTG2Q9NZH5 202 aa3.43□□□□□ -1.86
GCFC2-209ENST00000486016 KLHL8Q9P2G9 620 aaPredicted RBP3.43□□□□□ -1.86
GCFC2-209ENST00000486016 CAMK2AQ9UQM7 478 aa3.43□□□□□ -1.86
GCFC2-209ENST00000486016 KANSL1LA0AUZ9 987 aa3.42□□□□□ -1.86
GCFC2-209ENST00000486016 IFRD1O00458 451 aaPredicted RBP3.42□□□□□ -1.86
GCFC2-209ENST00000486016 CSPG5O95196 566 aa3.42□□□□□ -1.86
GCFC2-209ENST00000486016 NGFP01138 241 aa3.42□□□□□ -1.86
GCFC2-209ENST00000486016 KRT19P08727 400 aa3.42□□□□□ -1.86
GCFC2-209ENST00000486016 ANXA7P20073 488 aaKnown RBP3.42□□□□□ -1.86
GCFC2-209ENST00000486016 HRH2P25021 359 aa3.42□□□□□ -1.86
GCFC2-209ENST00000486016 MRPS34P82930 218 aaKnown RBP3.42□□□□□ -1.86
GCFC2-209ENST00000486016 ASPRV1Q53RT3 343 aa3.42□□□□□ -1.86
GCFC2-209ENST00000486016 NDUFAF5Q5TEU4 345 aa3.42□□□□□ -1.86
GCFC2-209ENST00000486016 TSPAN33Q86UF1 283 aa3.42□□□□□ -1.86
GCFC2-209ENST00000486016 C1orf52Q8N6N3 182 aaKnown RBP3.42□□□□□ -1.86
GCFC2-209ENST00000486016 PAF1Q8N7H5 531 aa3.42□□□□□ -1.86
GCFC2-209ENST00000486016 ZNF614Q8N883 585 aa3.42□□□□□ -1.86
GCFC2-209ENST00000486016 ANKRD42Q8N9B4 389 aa3.42□□□□□ -1.86
GCFC2-209ENST00000486016 MRGPRDQ8TDS7 321 aa3.42□□□□□ -1.86
GCFC2-209ENST00000486016 GRHL3Q8TE85 626 aa3.42□□□□□ -1.86
GCFC2-209ENST00000486016 ZNRF4Q8WWF5 429 aa3.42□□□□□ -1.86
GCFC2-209ENST00000486016 ST8SIA4Q92187 359 aa3.42□□□□□ -1.86
GCFC2-209ENST00000486016 C18orf12Q96KH6 178 aa3.42□□□□□ -1.86
GCFC2-209ENST00000486016 RHNO1Q9BSD3 238 aa3.42□□□□□ -1.86
GCFC2-209ENST00000486016 PPCSQ9HAB8 311 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms