RNA–Protein interactions for RNA: ENST00000485833.1

SMARCC1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 5

Gene SMARCC1, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-207ENST00000485833 ZBTB8BQ8NAP8 495 aaPredicted RBP4.54□□□□□ -1.68
SMARCC1-207ENST00000485833 HUS1BQ8NHY5 278 aa4.54□□□□□ -1.68
SMARCC1-207ENST00000485833 UHRF2Q96PU4 802 aa4.54□□□□□ -1.68
SMARCC1-207ENST00000485833 MPP6Q9NZW5 540 aa4.54□□□□□ -1.68
SMARCC1-207ENST00000485833 LUZP4Q9P127 313 aa4.54□□□□□ -1.68
SMARCC1-207ENST00000485833 A4GNTQ9UNA3 340 aa4.54□□□□□ -1.68
SMARCC1-207ENST00000485833 SCINQ9Y6U3 715 aa4.54□□□□□ -1.68
SMARCC1-207ENST00000485833 DOCK3Q8IZD9 2030 aa4.54□□□□□ -1.68
SMARCC1-207ENST00000485833 WDR81Q562E7 1941 aa4.53□□□□□ -1.68
SMARCC1-207ENST00000485833 PRSS47A8MTI9 375 aa4.53□□□□□ -1.68
SMARCC1-207ENST00000485833 IFNL4K9M1U5 179 aa4.53□□□□□ -1.68
SMARCC1-207ENST00000485833 LDLRAD4O15165 306 aa4.53□□□□□ -1.68
SMARCC1-207ENST00000485833 NCAM2O15394 837 aa4.53□□□□□ -1.68
SMARCC1-207ENST00000485833 HOXC11O43248 304 aaPredicted RBP4.53□□□□□ -1.68
SMARCC1-207ENST00000485833 BBOX1O75936 387 aa4.53□□□□□ -1.68
SMARCC1-207ENST00000485833 METAP2P50579 478 aaKnown RBP eCLIP4.53□□□□□ -1.68
SMARCC1-207ENST00000485833 CLCNKAP51800 687 aa4.53□□□□□ -1.68
SMARCC1-207ENST00000485833 FUT6P51993 359 aa4.53□□□□□ -1.68
SMARCC1-207ENST00000485833 RELQ04864 619 aaPredicted RBP4.53□□□□□ -1.68
SMARCC1-207ENST00000485833 SLC20A2Q08357 652 aa4.53□□□□□ -1.68
SMARCC1-207ENST00000485833 BAK1Q16611 211 aa4.53□□□□□ -1.68
SMARCC1-207ENST00000485833 SYT16Q17RD7 645 aa4.53□□□□□ -1.68
SMARCC1-207ENST00000485833 KRT24Q2M2I5 525 aa4.53□□□□□ -1.68
SMARCC1-207ENST00000485833 C2orf68Q2NKX9 166 aa4.53□□□□□ -1.68
SMARCC1-207ENST00000485833 LRIT3Q3SXY7 679 aa4.53□□□□□ -1.68
SMARCC1-207ENST00000485833 SLC9B1Q4ZJI4 515 aa4.53□□□□□ -1.68
SMARCC1-207ENST00000485833 OTUD3Q5T2D3 398 aaPredicted RBP4.53□□□□□ -1.68
SMARCC1-207ENST00000485833 KCTD18Q6PI47 426 aaPredicted RBP4.53□□□□□ -1.68
SMARCC1-207ENST00000485833 GDPD4Q6W3E5 623 aa4.53□□□□□ -1.68
SMARCC1-207ENST00000485833 KBTBD3Q8NAB2 608 aa4.53□□□□□ -1.68
SMARCC1-207ENST00000485833 U2AF1L4Q8WU68 220 aaKnown RBP4.53□□□□□ -1.68
SMARCC1-207ENST00000485833 KLHL29Q96CT2 875 aa4.53□□□□□ -1.68
SMARCC1-207ENST00000485833 FAM122AQ96E09 287 aa4.53□□□□□ -1.68
SMARCC1-207ENST00000485833 KIF1BPQ96EK5 621 aa4.53□□□□□ -1.68
SMARCC1-207ENST00000485833 ZBED3Q96IU2 234 aaPredicted RBP4.53□□□□□ -1.68
SMARCC1-207ENST00000485833 TTC14Q96N46 770 aa4.53□□□□□ -1.68
SMARCC1-207ENST00000485833 SH3GL2Q99962 352 aa4.53□□□□□ -1.68
SMARCC1-207ENST00000485833 UTP14AQ9BVJ6 771 aaKnown RBP4.53□□□□□ -1.68
SMARCC1-207ENST00000485833 TKTL2Q9H0I9 626 aa4.53□□□□□ -1.68
SMARCC1-207ENST00000485833 MMP28Q9H239 520 aa4.53□□□□□ -1.68
SMARCC1-207ENST00000485833 KCNN2Q9H2S1 579 aa4.53□□□□□ -1.68
SMARCC1-207ENST00000485833 LRRC4Q9HBW1 653 aa4.53□□□□□ -1.68
SMARCC1-207ENST00000485833 XIRP2A4UGR9 3374 aa4.52□□□□□ -1.69
SMARCC1-207ENST00000485833 CCDC196A0A1B0GTZ2 297 aa4.52□□□□□ -1.69
SMARCC1-207ENST00000485833 GOLGA6L9A6NEM1 432 aa4.52□□□□□ -1.69
SMARCC1-207ENST00000485833 RRN3P2A6NIE6 340 aa4.52□□□□□ -1.69
SMARCC1-207ENST00000485833 SEC14L5O43304 696 aa4.52□□□□□ -1.69
SMARCC1-207ENST00000485833 UFL1O94874 794 aa4.52□□□□□ -1.69
SMARCC1-207ENST00000485833 HOXB5P09067 269 aa4.52□□□□□ -1.69
SMARCC1-207ENST00000485833 KCNA5P22460 613 aa4.52□□□□□ -1.69
SMARCC1-207ENST00000485833 RRM1P23921 792 aa4.52□□□□□ -1.69
SMARCC1-207ENST00000485833 ARL1P40616 181 aaPredicted RBP4.52□□□□□ -1.69
SMARCC1-207ENST00000485833 TMPOP42166 694 aaKnown RBP4.52□□□□□ -1.69
SMARCC1-207ENST00000485833 PPM1FP49593 454 aaPredicted RBP4.52□□□□□ -1.69
SMARCC1-207ENST00000485833 HNRNPH2P55795 449 aaKnown RBP4.52□□□□□ -1.69
SMARCC1-207ENST00000485833 ACCSLQ4AC99 568 aa4.52□□□□□ -1.69
SMARCC1-207ENST00000485833 SLC45A4Q5BKX6 768 aa4.52□□□□□ -1.69
SMARCC1-207ENST00000485833 PLEKHA7Q6IQ23 1121 aa4.52□□□□□ -1.69
SMARCC1-207ENST00000485833 METTL2BQ6P1Q9 378 aaKnown RBP4.52□□□□□ -1.69
SMARCC1-207ENST00000485833 KIF6Q6ZMV9 814 aa4.52□□□□□ -1.69
SMARCC1-207ENST00000485833 ODF3L1Q8IXM7 274 aa4.52□□□□□ -1.69
SMARCC1-207ENST00000485833 TDHQ8IZJ6 230 aa4.52□□□□□ -1.69
SMARCC1-207ENST00000485833 SPATA6LQ8N4H0 392 aa4.52□□□□□ -1.69
SMARCC1-207ENST00000485833 HTRA1Q92743 480 aa4.52□□□□□ -1.69
SMARCC1-207ENST00000485833 HVCN1Q96D96 273 aa4.52□□□□□ -1.69
SMARCC1-207ENST00000485833 METTL2AQ96IZ6 378 aaKnown RBP4.52□□□□□ -1.69
SMARCC1-207ENST00000485833 FAM110AQ9BQ89 295 aa4.52□□□□□ -1.69
SMARCC1-207ENST00000485833 NDST4Q9H3R1 872 aa4.52□□□□□ -1.69
SMARCC1-207ENST00000485833 PPP1R3EQ9H7J1 279 aa4.52□□□□□ -1.69
SMARCC1-207ENST00000485833 VEZTQ9HBM0 779 aa4.52□□□□□ -1.69
SMARCC1-207ENST00000485833 GPR108Q9NPR9 543 aa4.52□□□□□ -1.69
SMARCC1-207ENST00000485833 HINT3Q9NQE9 182 aaKnown RBP4.52□□□□□ -1.69
SMARCC1-207ENST00000485833 KCND2Q9NZV8 630 aa4.52□□□□□ -1.69
SMARCC1-207ENST00000485833 ERRFI1Q9UJM3 462 aaPredicted RBP4.52□□□□□ -1.69
SMARCC1-207ENST00000485833 ERVK-11Q9UQG0 969 aa4.52□□□□□ -1.69
SMARCC1-207ENST00000485833 CHD9Q3L8U1 2897 aa4.52□□□□□ -1.69
SMARCC1-207ENST00000485833 WDFY4Q6ZS81 3184 aa4.51□□□□□ -1.69
SMARCC1-207ENST00000485833 LTBP2Q14767 1821 aa4.51□□□□□ -1.69
SMARCC1-207ENST00000485833 A0A1W2PQM1 296 aa4.51□□□□□ -1.69
SMARCC1-207ENST00000485833 CLRN2A0PK11 232 aa4.51□□□□□ -1.69
SMARCC1-207ENST00000485833 FAM172BPA6NC97 362 aa4.51□□□□□ -1.69
SMARCC1-207ENST00000485833 TTC36A6NLP5 189 aa4.51□□□□□ -1.69
SMARCC1-207ENST00000485833 SOCS5O75159 536 aa4.51□□□□□ -1.69
SMARCC1-207ENST00000485833 CRYAAP02489 173 aa4.51□□□□□ -1.69
SMARCC1-207ENST00000485833 HLA-DOBP13765 273 aa4.51□□□□□ -1.69
SMARCC1-207ENST00000485833 S1PR1P21453 382 aa4.51□□□□□ -1.69
SMARCC1-207ENST00000485833 PRKAR2BP31323 418 aa4.51□□□□□ -1.69
SMARCC1-207ENST00000485833 MAPK9P45984 424 aa4.51□□□□□ -1.69
SMARCC1-207ENST00000485833 SORDQ00796 357 aa4.51□□□□□ -1.69
SMARCC1-207ENST00000485833 PRKCZQ05513 592 aa4.51□□□□□ -1.69
SMARCC1-207ENST00000485833 RBBP5Q15291 538 aaKnown RBP4.51□□□□□ -1.69
SMARCC1-207ENST00000485833 PRICKLE4Q2TBC4 344 aa4.51□□□□□ -1.69
SMARCC1-207ENST00000485833 KCNT1Q5JUK3 1230 aa4.51□□□□□ -1.69
SMARCC1-207ENST00000485833 HIST2H2BCQ6DN03 193 aa4.51□□□□□ -1.69
SMARCC1-207ENST00000485833 HIST2H2BDQ6DRA6 164 aa4.51□□□□□ -1.69
SMARCC1-207ENST00000485833 QSOX2Q6ZRP7 698 aa4.51□□□□□ -1.69
SMARCC1-207ENST00000485833 SLC46A3Q7Z3Q1 461 aa4.51□□□□□ -1.69
SMARCC1-207ENST00000485833 PPP1R42Q7Z4L9 355 aa4.51□□□□□ -1.69
SMARCC1-207ENST00000485833 ZNF354CQ86Y25 554 aa4.51□□□□□ -1.69
SMARCC1-207ENST00000485833 WDR63Q8IWG1 891 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms