RNA–Protein interactions for RNA: ENST00000485792.1

CUX1-208, Transcript of cut like homeobox 1, humanhuman

TSL 5

Gene CUX1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-208ENST00000485792 PRELID2Q8N945 189 aa5.66□□□□□ -1.5
CUX1-208ENST00000485792 ATL2Q8NHH9 583 aa5.66□□□□□ -1.5
CUX1-208ENST00000485792 BRSK1Q8TDC3 778 aa5.66□□□□□ -1.5
CUX1-208ENST00000485792 COG1Q8WTW3 980 aa5.66□□□□□ -1.5
CUX1-208ENST00000485792 PMEPA1Q969W9 287 aa5.66□□□□□ -1.5
CUX1-208ENST00000485792 CRELD1Q96HD1 420 aa5.66□□□□□ -1.5
CUX1-208ENST00000485792 SGSM3Q96HU1 749 aa5.66□□□□□ -1.5
CUX1-208ENST00000485792 ZNF778Q96MU6 729 aa5.66□□□□□ -1.5
CUX1-208ENST00000485792 PPP1R2P1Q96PQ5 205 aa5.66□□□□□ -1.5
CUX1-208ENST00000485792 TMEM121Q9BTD3 319 aa5.66□□□□□ -1.5
CUX1-208ENST00000485792 ZSCAN5AQ9BUG6 496 aa5.66□□□□□ -1.5
CUX1-208ENST00000485792 RIOK2Q9BVS4 552 aaKnown RBP5.66□□□□□ -1.5
CUX1-208ENST00000485792 SLC13A1Q9BZW2 595 aa5.66□□□□□ -1.5
CUX1-208ENST00000485792 TWSG1Q9GZX9 223 aa5.66□□□□□ -1.5
CUX1-208ENST00000485792 TMEM168Q9H0V1 697 aa5.66□□□□□ -1.5
CUX1-208ENST00000485792 RMI1Q9H9A7 625 aa5.66□□□□□ -1.5
CUX1-208ENST00000485792 TRIM39Q9HCM9 518 aa5.66□□□□□ -1.5
CUX1-208ENST00000485792 LZTFL1Q9NQ48 299 aa5.66□□□□□ -1.5
CUX1-208ENST00000485792 PHPT1Q9NRX4 125 aaPredicted RBP5.66□□□□□ -1.5
CUX1-208ENST00000485792 RAD18Q9NS91 495 aa5.66□□□□□ -1.5
CUX1-208ENST00000485792 SPATS2LQ9NUQ6 558 aaKnown RBP5.66□□□□□ -1.5
CUX1-208ENST00000485792 PDP2Q9P2J9 529 aa5.66□□□□□ -1.5
CUX1-208ENST00000485792 FTSJ1Q9UET6 329 aa5.66□□□□□ -1.5
CUX1-208ENST00000485792 SLC23A2Q9UGH3 650 aa5.66□□□□□ -1.5
CUX1-208ENST00000485792 APOBEC3BQ9UH17 382 aaKnown RBP5.66□□□□□ -1.5
CUX1-208ENST00000485792 FEZ2Q9UHY8 353 aaPredicted RBP5.66□□□□□ -1.5
CUX1-208ENST00000485792 RIMKLBQ9ULI2 386 aa5.66□□□□□ -1.5
CUX1-208ENST00000485792 AAR2Q9Y312 384 aaKnown RBP5.66□□□□□ -1.5
CUX1-208ENST00000485792 PRKAB1Q9Y478 270 aa5.66□□□□□ -1.5
CUX1-208ENST00000485792 JRKLQ9Y4A0 524 aa5.66□□□□□ -1.5
CUX1-208ENST00000485792 TTLL3Q9Y4R7 772 aa5.66□□□□□ -1.5
CUX1-208ENST00000485792 PCDHB1Q9Y5F3 818 aa5.66□□□□□ -1.5
CUX1-208ENST00000485792 A0A1W2PQM1 296 aa5.65□□□□□ -1.5
CUX1-208ENST00000485792 GOLGA6L9A6NEM1 432 aa5.65□□□□□ -1.5
CUX1-208ENST00000485792 H7C0C1 242 aa5.65□□□□□ -1.5
CUX1-208ENST00000485792 ZNF185O15231 689 aa5.65□□□□□ -1.5
CUX1-208ENST00000485792 KCNN4O15554 427 aa5.65□□□□□ -1.5
CUX1-208ENST00000485792 NUDT21O43809 227 aaKnown RBP5.65□□□□□ -1.5
CUX1-208ENST00000485792 OPA1O60313 960 aa5.65□□□□□ -1.5
CUX1-208ENST00000485792 PMPCBO75439 489 aa5.65□□□□□ -1.5
CUX1-208ENST00000485792 TCEA3O75764 348 aa5.65□□□□□ -1.5
CUX1-208ENST00000485792 TMEM63AO94886 807 aa5.65□□□□□ -1.5
CUX1-208ENST00000485792 AP2A1O95782 977 aa5.65□□□□□ -1.5
CUX1-208ENST00000485792 TNFP01375 233 aa5.65□□□□□ -1.5
CUX1-208ENST00000485792 ARNTP27540 789 aa5.65□□□□□ -1.5
CUX1-208ENST00000485792 CXCR5P32302 372 aa5.65□□□□□ -1.5
CUX1-208ENST00000485792 ADCY8P40145 1251 aa5.65□□□□□ -1.5
CUX1-208ENST00000485792 GPR1P46091 355 aa5.65□□□□□ -1.5
CUX1-208ENST00000485792 FASLGP48023 281 aa5.65□□□□□ -1.5
CUX1-208ENST00000485792 ATP5OP48047 213 aa5.65□□□□□ -1.5
CUX1-208ENST00000485792 CDKN1CP49918 316 aaPredicted RBP5.65□□□□□ -1.5
CUX1-208ENST00000485792 DUSP3P51452 185 aaPredicted RBP5.65□□□□□ -1.5
CUX1-208ENST00000485792 EPHB1P54762 984 aa5.65□□□□□ -1.5
CUX1-208ENST00000485792 NAP1L1P55209 391 aaKnown RBP5.65□□□□□ -1.5
CUX1-208ENST00000485792 MAZP56270 477 aaKnown RBP5.65□□□□□ -1.5
CUX1-208ENST00000485792 CTBSQ01459 385 aa5.65□□□□□ -1.5
CUX1-208ENST00000485792 DMPKQ09013 629 aa5.65□□□□□ -1.5
CUX1-208ENST00000485792 PEX6Q13608 980 aa5.65□□□□□ -1.5
CUX1-208ENST00000485792 SEMA3AQ14563 771 aa5.65□□□□□ -1.5
CUX1-208ENST00000485792 TAF1AQ15573 450 aaPredicted RBP5.65□□□□□ -1.5
CUX1-208ENST00000485792 ATP13A5Q4VNC0 1218 aa5.65□□□□□ -1.5
CUX1-208ENST00000485792 ODF2Q5BJF6 829 aa5.65□□□□□ -1.5
CUX1-208ENST00000485792 CHCHD2P9Q5T1J5 151 aaPredicted RBP5.65□□□□□ -1.5
CUX1-208ENST00000485792 CERCAMQ5T4B2 595 aa5.65□□□□□ -1.5
CUX1-208ENST00000485792 UBAP2Q5T6F2 1119 aaKnown RBP5.65□□□□□ -1.5
CUX1-208ENST00000485792 ARMC3Q5W041 872 aa5.65□□□□□ -1.5
CUX1-208ENST00000485792 ZNF385CQ66K41 422 aaPredicted RBP5.65□□□□□ -1.5
CUX1-208ENST00000485792 DENND2CQ68D51 928 aa5.65□□□□□ -1.5
CUX1-208ENST00000485792 DARS2Q6PI48 645 aaKnown RBP5.65□□□□□ -1.5
CUX1-208ENST00000485792 WASH2PQ6VEQ5 465 aa5.65□□□□□ -1.5
CUX1-208ENST00000485792 B3GNT8Q7Z7M8 397 aa5.65□□□□□ -1.5
CUX1-208ENST00000485792 ADGRG6Q86SQ4 1221 aa5.65□□□□□ -1.5
CUX1-208ENST00000485792 HID1Q8IV36 788 aa5.65□□□□□ -1.5
CUX1-208ENST00000485792 NAGSQ8N159 534 aa5.65□□□□□ -1.5
CUX1-208ENST00000485792 GALNT15Q8N3T1 639 aa5.65□□□□□ -1.5
CUX1-208ENST00000485792 LILRA3Q8N6C8 439 aaPredicted RBP5.65□□□□□ -1.5
CUX1-208ENST00000485792 ARL10Q8N8L6 244 aa5.65□□□□□ -1.5
CUX1-208ENST00000485792 FAM71DQ8N9W8 422 aa5.65□□□□□ -1.5
CUX1-208ENST00000485792 DDHD1Q8NEL9 900 aa5.65□□□□□ -1.5
CUX1-208ENST00000485792 OR6C4Q8NGE1 309 aa5.65□□□□□ -1.5
CUX1-208ENST00000485792 CCHCR1Q8TD31 782 aa5.65□□□□□ -1.5
CUX1-208ENST00000485792 ACTRT1Q8TDG2 376 aa5.65□□□□□ -1.5
CUX1-208ENST00000485792 LMX1AQ8TE12 382 aa5.65□□□□□ -1.5
CUX1-208ENST00000485792 C1orf54Q8WWF1 131 aa5.65□□□□□ -1.5
CUX1-208ENST00000485792 PEX13Q92968 403 aa5.65□□□□□ -1.5
CUX1-208ENST00000485792 GLYATL1Q969I3 302 aa5.65□□□□□ -1.5
CUX1-208ENST00000485792 GRAMD1AQ96CP6 724 aa5.65□□□□□ -1.5
CUX1-208ENST00000485792 PRR11Q96HE9 360 aaPredicted RBP5.65□□□□□ -1.5
CUX1-208ENST00000485792 MS4A14Q96JA4 679 aa5.65□□□□□ -1.5
CUX1-208ENST00000485792 NRSN2Q9GZP1 204 aa5.65□□□□□ -1.5
CUX1-208ENST00000485792 CYP4F12Q9HCS2 524 aa5.65□□□□□ -1.5
CUX1-208ENST00000485792 WASH6PQ9NQA3 447 aa5.65□□□□□ -1.5
CUX1-208ENST00000485792 PKD2L2Q9NZM6 624 aa5.65□□□□□ -1.5
CUX1-208ENST00000485792 SEPT10Q9P0V9 454 aa5.65□□□□□ -1.5
CUX1-208ENST00000485792 KLHL8Q9P2G9 620 aaPredicted RBP5.65□□□□□ -1.5
CUX1-208ENST00000485792 KLQ9UEF7 1012 aa5.65□□□□□ -1.5
CUX1-208ENST00000485792 RSPH14Q9UHP6 348 aa5.65□□□□□ -1.5
CUX1-208ENST00000485792 RALYQ9UKM9 306 aaKnown RBP5.65□□□□□ -1.5
CUX1-208ENST00000485792 SUFUQ9UMX1 484 aa5.65□□□□□ -1.5
CUX1-208ENST00000485792 SHOC2Q9UQ13 582 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms