RNA–Protein interactions for RNA: ENST00000485550.5

HMGN1-215, Transcript of high mobility group nucleosome binding domain 1, human

TSL 5

Gene HMGN1, Length 745 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HMGN1-215	ENST00000485550	TYRP1	P17643	537 aa		10.42	□□□□□ -0.74
HMGN1-215	ENST00000485550	COMT	P21964	271 aa		10.42	□□□□□ -0.74
HMGN1-215	ENST00000485550	INSC	Q1MX18	579 aa		10.42	□□□□□ -0.74
HMGN1-215	ENST00000485550	TEX44	Q53QW1	395 aa		10.42	□□□□□ -0.74
HMGN1-215	ENST00000485550	DCAF12	Q5T6F0	453 aa		10.42	□□□□□ -0.74
HMGN1-215	ENST00000485550	CAPRIN2	Q6IMN6	1127 aa	Known RBP	10.42	□□□□□ -0.74
HMGN1-215	ENST00000485550	CCDC70	Q6NSX1	233 aa		10.42	□□□□□ -0.74
HMGN1-215	ENST00000485550	ADGRG6	Q86SQ4	1221 aa		10.42	□□□□□ -0.74
HMGN1-215	ENST00000485550	PHYKPL	Q8IUZ5	450 aa		10.42	□□□□□ -0.74
HMGN1-215	ENST00000485550	RHOT1	Q8IXI2	618 aa		10.42	□□□□□ -0.74
HMGN1-215	ENST00000485550	SLC25A41	Q8N5S1	370 aa		10.42	□□□□□ -0.74
HMGN1-215	ENST00000485550	GDAP1	Q8TB36	358 aa		10.42	□□□□□ -0.74
HMGN1-215	ENST00000485550	GLYATL1	Q969I3	302 aa		10.42	□□□□□ -0.74
HMGN1-215	ENST00000485550	SH3KBP1	Q96B97	665 aa		10.42	□□□□□ -0.74
HMGN1-215	ENST00000485550	HAUS1	Q96CS2	278 aa		10.42	□□□□□ -0.74
HMGN1-215	ENST00000485550	OLFM3	Q96PB7	478 aa		10.42	□□□□□ -0.74
HMGN1-215	ENST00000485550	PLEKHG4B	Q96PX9	1271 aa		10.42	□□□□□ -0.74
HMGN1-215	ENST00000485550	HERPUD2	Q9BSE4	406 aa		10.42	□□□□□ -0.74
HMGN1-215	ENST00000485550	DDA1	Q9BW61	102 aa		10.42	□□□□□ -0.74
HMGN1-215	ENST00000485550	GOLPH3	Q9H4A6	298 aa		10.42	□□□□□ -0.74
HMGN1-215	ENST00000485550	RMI1	Q9H9A7	625 aa		10.42	□□□□□ -0.74
HMGN1-215	ENST00000485550	MAGEE1	Q9HCI5	957 aa		10.42	□□□□□ -0.74
HMGN1-215	ENST00000485550	APMAP	Q9HDC9	416 aa		10.42	□□□□□ -0.74
HMGN1-215	ENST00000485550	DDX56	Q9NY93	547 aa	Known RBP	10.42	□□□□□ -0.74
HMGN1-215	ENST00000485550	PILRA	Q9UKJ1	303 aa		10.42	□□□□□ -0.74
HMGN1-215	ENST00000485550	MRPS18B	Q9Y676	258 aa	Known RBP	10.42	□□□□□ -0.74
HMGN1-215	ENST00000485550	POLQ	O75417	2590 aa		10.42	□□□□□ -0.74
HMGN1-215	ENST00000485550	PRRC2C	Q9Y520	2896 aa	Known RBP	10.42	□□□□□ -0.74
HMGN1-215	ENST00000485550		A0A0A6YYK5	440 aa	Predicted RBP	10.41	□□□□□ -0.74
HMGN1-215	ENST00000485550	KIR2DS5	A0A0G2JLQ3	304 aa		10.41	□□□□□ -0.74
HMGN1-215	ENST00000485550		A0A0G2JNG1	304 aa		10.41	□□□□□ -0.74
HMGN1-215	ENST00000485550	PDZK1P1	A8MUH7	402 aa		10.41	□□□□□ -0.74
HMGN1-215	ENST00000485550	ZNF487	B1APH4	448 aa		10.41	□□□□□ -0.74
HMGN1-215	ENST00000485550		B4E171	279 aa		10.41	□□□□□ -0.74
HMGN1-215	ENST00000485550	KIR2DS3	K7RE56	304 aa		10.41	□□□□□ -0.74
HMGN1-215	ENST00000485550	CAPN5	O15484	640 aa	Predicted RBP	10.41	□□□□□ -0.74
HMGN1-215	ENST00000485550	BUD23	O43709	281 aa	Known RBP	10.41	□□□□□ -0.74
HMGN1-215	ENST00000485550	CST8	O60676	142 aa		10.41	□□□□□ -0.74
HMGN1-215	ENST00000485550	MTA2	O94776	668 aa		10.41	□□□□□ -0.74
HMGN1-215	ENST00000485550	CDK14	O94921	469 aa		10.41	□□□□□ -0.74
HMGN1-215	ENST00000485550	NDST3	O95803	873 aa		10.41	□□□□□ -0.74
HMGN1-215	ENST00000485550	PECAM1	P16284	738 aa	Predicted RBP	10.41	□□□□□ -0.74
HMGN1-215	ENST00000485550	NFKB1	P19838	968 aa		10.41	□□□□□ -0.74
HMGN1-215	ENST00000485550	TCN2	P20062	427 aa		10.41	□□□□□ -0.74
HMGN1-215	ENST00000485550	PTPN3	P26045	913 aa		10.41	□□□□□ -0.74
HMGN1-215	ENST00000485550	RPL10	P27635	214 aa	Known RBP	10.41	□□□□□ -0.74
HMGN1-215	ENST00000485550	CD68	P34810	354 aa	Predicted RBP	10.41	□□□□□ -0.74
HMGN1-215	ENST00000485550	TSPAN7	P41732	249 aa		10.41	□□□□□ -0.74
HMGN1-215	ENST00000485550	CHRNA4	P43681	627 aa		10.41	□□□□□ -0.74
HMGN1-215	ENST00000485550	DRG2	P55039	364 aa	Known RBP	10.41	□□□□□ -0.74
HMGN1-215	ENST00000485550	ADCY2	Q08462	1091 aa		10.41	□□□□□ -0.74
HMGN1-215	ENST00000485550	SEPT6	Q14141	434 aa		10.41	□□□□□ -0.74
HMGN1-215	ENST00000485550	KIR2DS5	Q14953	304 aa		10.41	□□□□□ -0.74
HMGN1-215	ENST00000485550	KHDC1	Q4VXA5	237 aa	Known RBP	10.41	□□□□□ -0.74
HMGN1-215	ENST00000485550	LRRC38	Q5VT99	294 aa		10.41	□□□□□ -0.74
HMGN1-215	ENST00000485550	WDR74	Q6RFH5	385 aa	Predicted RBP	10.41	□□□□□ -0.74
HMGN1-215	ENST00000485550	ARHGAP22	Q7Z5H3	698 aa		10.41	□□□□□ -0.74
HMGN1-215	ENST00000485550	ZC3H18	Q86VM9	953 aa	Known RBP	10.41	□□□□□ -0.74
HMGN1-215	ENST00000485550	NLGN4X	Q8N0W4	816 aa		10.41	□□□□□ -0.74
HMGN1-215	ENST00000485550	TRAM1L1	Q8N609	369 aa		10.41	□□□□□ -0.74
HMGN1-215	ENST00000485550	BMPER	Q8N8U9	685 aa		10.41	□□□□□ -0.74
HMGN1-215	ENST00000485550	NLGN4Y	Q8NFZ3	816 aa	Predicted RBP	10.41	□□□□□ -0.74
HMGN1-215	ENST00000485550	STARD8	Q92502	1023 aa		10.41	□□□□□ -0.74
HMGN1-215	ENST00000485550	KIAA1143	Q96AT1	154 aa	Predicted RBP	10.41	□□□□□ -0.74
HMGN1-215	ENST00000485550	TADA1	Q96BN2	335 aa		10.41	□□□□□ -0.74
HMGN1-215	ENST00000485550	RTP4	Q96DX8	246 aa		10.41	□□□□□ -0.74
HMGN1-215	ENST00000485550	TEKT5	Q96M29	485 aa		10.41	□□□□□ -0.74
HMGN1-215	ENST00000485550	ZSCAN5A	Q9BUG6	496 aa		10.41	□□□□□ -0.74
HMGN1-215	ENST00000485550	LDHAL6B	Q9BYZ2	381 aa	Predicted RBP	10.41	□□□□□ -0.74
HMGN1-215	ENST00000485550	ASPSCR1	Q9BZE9	553 aa		10.41	□□□□□ -0.74
HMGN1-215	ENST00000485550	TSPY26P	Q9H489	355 aa		10.41	□□□□□ -0.74
HMGN1-215	ENST00000485550	PDP2	Q9P2J9	529 aa		10.41	□□□□□ -0.74
HMGN1-215	ENST00000485550	TMPRSS11E	Q9UL52	423 aa		10.41	□□□□□ -0.74
HMGN1-215	ENST00000485550	TFR2	Q9UP52	801 aa		10.41	□□□□□ -0.74
HMGN1-215	ENST00000485550	ADGRG1	Q9Y653	693 aa		10.41	□□□□□ -0.74
HMGN1-215	ENST00000485550	OR5K4	A6NMS3	321 aa		10.4	□□□□□ -0.74
HMGN1-215	ENST00000485550	AKR1B15	C9JRZ8	316 aa	Predicted RBP	10.4	□□□□□ -0.74
HMGN1-215	ENST00000485550	CHUK	O15111	745 aa		10.4	□□□□□ -0.74
HMGN1-215	ENST00000485550	UGT1A9	O60656	530 aa		10.4	□□□□□ -0.74
HMGN1-215	ENST00000485550	VIP	P01282	170 aa		10.4	□□□□□ -0.74
HMGN1-215	ENST00000485550	SLC2A4	P14672	509 aa		10.4	□□□□□ -0.74
HMGN1-215	ENST00000485550	ZNF7	P17097	686 aa	Predicted RBP	10.4	□□□□□ -0.74
HMGN1-215	ENST00000485550	AMD1	P17707	334 aa		10.4	□□□□□ -0.74
HMGN1-215	ENST00000485550	UGT1A6	P19224	532 aa		10.4	□□□□□ -0.74
HMGN1-215	ENST00000485550	PTMS	P20962	102 aa		10.4	□□□□□ -0.74
HMGN1-215	ENST00000485550	UGT1A1	P22309	533 aa		10.4	□□□□□ -0.74
HMGN1-215	ENST00000485550	UGT1A4	P22310	534 aa		10.4	□□□□□ -0.74
HMGN1-215	ENST00000485550	SLC19A1	P41440	591 aa		10.4	□□□□□ -0.74
HMGN1-215	ENST00000485550	CDKN2B	P42772	138 aa		10.4	□□□□□ -0.74
HMGN1-215	ENST00000485550	SLC1A1	P43005	524 aa		10.4	□□□□□ -0.74
HMGN1-215	ENST00000485550	MAGEA1	P43355	309 aa		10.4	□□□□□ -0.74
HMGN1-215	ENST00000485550	SEPHS1	P49903	392 aa		10.4	□□□□□ -0.74
HMGN1-215	ENST00000485550	GFER	P55789	205 aa		10.4	□□□□□ -0.74
HMGN1-215	ENST00000485550	WNT3A	P56704	352 aa		10.4	□□□□□ -0.74
HMGN1-215	ENST00000485550	RAB15	P59190	212 aa		10.4	□□□□□ -0.74
HMGN1-215	ENST00000485550	UBE2I	P63279	158 aa	Known RBP	10.4	□□□□□ -0.74
HMGN1-215	ENST00000485550	MC2R	Q01718	297 aa		10.4	□□□□□ -0.74
HMGN1-215	ENST00000485550	FOXM1	Q08050	763 aa		10.4	□□□□□ -0.74
HMGN1-215	ENST00000485550	WASHC5	Q12768	1159 aa		10.4	□□□□□ -0.74
HMGN1-215	ENST00000485550	PRKD1	Q15139	912 aa	Predicted RBP	10.4	□□□□□ -0.74

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