RNA–Protein interactions for RNA: ENST00000485248.2

CAPN13-206, Transcript of calpain 13, humanhuman

TSL 3

Gene CAPN13, Length 710 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN13-206ENST00000485248 HOOK3Q86VS8 718 aa6.29□□□□□ -1.4
CAPN13-206ENST00000485248 TRIM59Q8IWR1 403 aa6.29□□□□□ -1.4
CAPN13-206ENST00000485248 KIAA0895Q8NCT3 520 aa6.29□□□□□ -1.4
CAPN13-206ENST00000485248 CCDC197Q8NCU1 140 aa6.29□□□□□ -1.4
CAPN13-206ENST00000485248 OR56A4Q8NGH8 313 aa6.29□□□□□ -1.4
CAPN13-206ENST00000485248 FBXO27Q8NI29 283 aa6.29□□□□□ -1.4
CAPN13-206ENST00000485248 CT55Q8WUE5 264 aa6.29□□□□□ -1.4
CAPN13-206ENST00000485248 LARP4BQ92615 738 aaKnown RBP6.29□□□□□ -1.4
CAPN13-206ENST00000485248 N4BP2L2Q92802 583 aaPredicted RBP6.29□□□□□ -1.4
CAPN13-206ENST00000485248 PDXPQ96GD0 296 aa6.29□□□□□ -1.4
CAPN13-206ENST00000485248 RSRC1Q96IZ7 334 aaKnown RBP6.29□□□□□ -1.4
CAPN13-206ENST00000485248 FIZ1Q96SL8 496 aa6.29□□□□□ -1.4
CAPN13-206ENST00000485248 KRT12Q99456 494 aa6.29□□□□□ -1.4
CAPN13-206ENST00000485248 SMAD5Q99717 465 aaKnown RBP6.29□□□□□ -1.4
CAPN13-206ENST00000485248 MMTAG2Q9BU76 263 aaKnown RBP6.29□□□□□ -1.4
CAPN13-206ENST00000485248 CEP44Q9C0F1 390 aa6.29□□□□□ -1.4
CAPN13-206ENST00000485248 CXXC4Q9H2H0 198 aa6.29□□□□□ -1.4
CAPN13-206ENST00000485248 ZDHHC6Q9H6R6 413 aa6.29□□□□□ -1.4
CAPN13-206ENST00000485248 SUDS3Q9H7L9 328 aaPredicted RBP6.29□□□□□ -1.4
CAPN13-206ENST00000485248 LHX9Q9NQ69 397 aa6.29□□□□□ -1.4
CAPN13-206ENST00000485248 FGF21Q9NSA1 209 aa6.29□□□□□ -1.4
CAPN13-206ENST00000485248 TMEM9Q9P0T7 183 aa6.29□□□□□ -1.4
CAPN13-206ENST00000485248 CTNNAL1Q9UBT7 734 aa6.29□□□□□ -1.4
CAPN13-206ENST00000485248 HMGXB4Q9UGU5 601 aa6.29□□□□□ -1.4
CAPN13-206ENST00000485248 ZNHIT2Q9UHR6 403 aa6.29□□□□□ -1.4
CAPN13-206ENST00000485248 SH3BGRL2Q9UJC5 107 aa6.29□□□□□ -1.4
CAPN13-206ENST00000485248 PNMA8BQ9ULN7 279 aaPredicted RBP6.29□□□□□ -1.4
CAPN13-206ENST00000485248 SNX7Q9UNH6 387 aa6.29□□□□□ -1.4
CAPN13-206ENST00000485248 RPH3AQ9Y2J0 694 aaPredicted RBP6.29□□□□□ -1.4
CAPN13-206ENST00000485248 PCDHGC4Q9Y5F7 938 aa6.29□□□□□ -1.4
CAPN13-206ENST00000485248 DGKBQ9Y6T7 804 aa6.29□□□□□ -1.4
CAPN13-206ENST00000485248 GOLGA6L10A0A0M3HER8 536 aa6.28□□□□□ -1.4
CAPN13-206ENST00000485248 FOXO6A8MYZ6 492 aa6.28□□□□□ -1.4
CAPN13-206ENST00000485248 E7ENQ6 273 aa6.28□□□□□ -1.4
CAPN13-206ENST00000485248 F8VZ95 297 aa6.28□□□□□ -1.4
CAPN13-206ENST00000485248 PGRMC1O00264 195 aaKnown RBP6.28□□□□□ -1.4
CAPN13-206ENST00000485248 O00370 1275 aa6.28□□□□□ -1.4
CAPN13-206ENST00000485248 THAP12O43422 761 aa6.28□□□□□ -1.4
CAPN13-206ENST00000485248 JRKO75564 520 aa6.28□□□□□ -1.4
CAPN13-206ENST00000485248 CEACAM4O75871 244 aa6.28□□□□□ -1.4
CAPN13-206ENST00000485248 ZWINTO95229 277 aa6.28□□□□□ -1.4
CAPN13-206ENST00000485248 MAP3K6O95382 1288 aa6.28□□□□□ -1.4
CAPN13-206ENST00000485248 ECEL1O95672 775 aa6.28□□□□□ -1.4
CAPN13-206ENST00000485248 AGTP01019 485 aa6.28□□□□□ -1.4
CAPN13-206ENST00000485248 PCCBP05166 539 aa6.28□□□□□ -1.4
CAPN13-206ENST00000485248 SRCP12931 536 aa6.28□□□□□ -1.4
CAPN13-206ENST00000485248 CCND1P24385 295 aa6.28□□□□□ -1.4
CAPN13-206ENST00000485248 DNASE1P24855 282 aa6.28□□□□□ -1.4
CAPN13-206ENST00000485248 PTPN4P29074 926 aa6.28□□□□□ -1.4
CAPN13-206ENST00000485248 CSF2RBP32927 897 aa6.28□□□□□ -1.4
CAPN13-206ENST00000485248 MAPK9P45984 424 aa6.28□□□□□ -1.4
CAPN13-206ENST00000485248 PLK1P53350 603 aa6.28□□□□□ -1.4
CAPN13-206ENST00000485248 HADHBP55084 474 aaKnown RBP6.28□□□□□ -1.4
CAPN13-206ENST00000485248 YBX1P67809 324 aaKnown RBP6.28□□□□□ -1.4
CAPN13-206ENST00000485248 ADIGQ0VDE8 80 aa6.28□□□□□ -1.4
CAPN13-206ENST00000485248 Q0VFX4 171 aa6.28□□□□□ -1.4
CAPN13-206ENST00000485248 POU4F2Q12837 409 aa6.28□□□□□ -1.4
CAPN13-206ENST00000485248 CDC16Q13042 620 aa6.28□□□□□ -1.4
CAPN13-206ENST00000485248 PSMD6Q15008 389 aa6.28□□□□□ -1.4
CAPN13-206ENST00000485248 IRF4Q15306 451 aa6.28□□□□□ -1.4
CAPN13-206ENST00000485248 LLGL1Q15334 1064 aa6.28□□□□□ -1.4
CAPN13-206ENST00000485248 SGSM1Q2NKQ1 1148 aa6.28□□□□□ -1.4
CAPN13-206ENST00000485248 CES4AQ5XG92 561 aa6.28□□□□□ -1.4
CAPN13-206ENST00000485248 NADSYN1Q6IA69 706 aa6.28□□□□□ -1.4
CAPN13-206ENST00000485248 DPY19L2P1Q6NXN4 242 aa6.28□□□□□ -1.4
CAPN13-206ENST00000485248 C22orf39Q6P5X5 142 aa6.28□□□□□ -1.4
CAPN13-206ENST00000485248 TMC3Q7Z5M5 1100 aa6.28□□□□□ -1.4
CAPN13-206ENST00000485248 SYCE1Q8N0S2 351 aa6.28□□□□□ -1.4
CAPN13-206ENST00000485248 MEIOBQ8N635 442 aa6.28□□□□□ -1.4
CAPN13-206ENST00000485248 ANKS4BQ8N8V4 417 aa6.28□□□□□ -1.4
CAPN13-206ENST00000485248 CLEC1AQ8NC01 280 aa6.28□□□□□ -1.4
CAPN13-206ENST00000485248 CHST14Q8NCH0 376 aa6.28□□□□□ -1.4
CAPN13-206ENST00000485248 OR2A12Q8NGT7 310 aa6.28□□□□□ -1.4
CAPN13-206ENST00000485248 GRHL3Q8TE85 626 aa6.28□□□□□ -1.4
CAPN13-206ENST00000485248 FAR1Q8WVX9 515 aa6.28□□□□□ -1.4
CAPN13-206ENST00000485248 NCSTNQ92542 709 aa6.28□□□□□ -1.4
CAPN13-206ENST00000485248 RAD54LQ92698 747 aa6.28□□□□□ -1.4
CAPN13-206ENST00000485248 RNF31Q96EP0 1072 aa6.28□□□□□ -1.4
CAPN13-206ENST00000485248 ELMO2Q96JJ3 720 aa6.28□□□□□ -1.4
CAPN13-206ENST00000485248 AGAP3Q96P47 875 aa6.28□□□□□ -1.4
CAPN13-206ENST00000485248 FERD3LQ96RJ6 166 aa6.28□□□□□ -1.4
CAPN13-206ENST00000485248 TSG101Q99816 390 aa6.28□□□□□ -1.4
CAPN13-206ENST00000485248 HEPHQ9BQS7 1158 aa6.28□□□□□ -1.4
CAPN13-206ENST00000485248 ZNF559Q9BR84 538 aa6.28□□□□□ -1.4
CAPN13-206ENST00000485248 APOOQ9BUR5 198 aa6.28□□□□□ -1.4
CAPN13-206ENST00000485248 ROPN1BQ9BZX4 212 aaPredicted RBP6.28□□□□□ -1.4
CAPN13-206ENST00000485248 GANQ9H2C0 597 aa6.28□□□□□ -1.4
CAPN13-206ENST00000485248 TNKS2Q9H2K2 1166 aa6.28□□□□□ -1.4
CAPN13-206ENST00000485248 MMRN2Q9H8L6 949 aa6.28□□□□□ -1.4
CAPN13-206ENST00000485248 ROPN1Q9HAT0 212 aaPredicted RBP6.28□□□□□ -1.4
CAPN13-206ENST00000485248 NOD2Q9HC29 1040 aa6.28□□□□□ -1.4
CAPN13-206ENST00000485248 SEMA3GQ9NS98 782 aa6.28□□□□□ -1.4
CAPN13-206ENST00000485248 CCM2LQ9NUG4 571 aaPredicted RBP6.28□□□□□ -1.4
CAPN13-206ENST00000485248 BLOC1S4Q9NUP1 217 aa6.28□□□□□ -1.4
CAPN13-206ENST00000485248 OLAHQ9NV23 265 aa6.28□□□□□ -1.4
CAPN13-206ENST00000485248 HESX1Q9UBX0 185 aa6.28□□□□□ -1.4
CAPN13-206ENST00000485248 CNOT8Q9UFF9 292 aaKnown RBP6.28□□□□□ -1.4
CAPN13-206ENST00000485248 AJAP1Q9UKB5 411 aaPredicted RBP6.28□□□□□ -1.4
CAPN13-206ENST00000485248 CORO1CQ9ULV4 474 aaPredicted RBP6.28□□□□□ -1.4
CAPN13-206ENST00000485248 RPL26L1Q9UNX3 145 aaKnown RBP6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms