RNA–Protein interactions for RNA: ENST00000484275.1

SCAF11-207, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-207ENST00000484275 NAALADL1Q9UQQ1 740 aa3.82□□□□□ -1.8
SCAF11-207ENST00000484275 KDM3AQ9Y4C1 1321 aa3.81□□□□□ -1.8
SCAF11-207ENST00000484275 E9PQ18 207 aa3.81□□□□□ -1.8
SCAF11-207ENST00000484275 TGFB1I1O43294 461 aa3.81□□□□□ -1.8
SCAF11-207ENST00000484275 ANXA7P20073 488 aaKnown RBP3.81□□□□□ -1.8
SCAF11-207ENST00000484275 ICAM3P32942 547 aa3.81□□□□□ -1.8
SCAF11-207ENST00000484275 WNT5AP41221 380 aa3.81□□□□□ -1.8
SCAF11-207ENST00000484275 PAFAH1B1P43034 410 aa3.81□□□□□ -1.8
SCAF11-207ENST00000484275 MMP15P51511 669 aa3.81□□□□□ -1.8
SCAF11-207ENST00000484275 PPARDQ03181 441 aa3.81□□□□□ -1.8
SCAF11-207ENST00000484275 PDE1CQ14123 709 aaPredicted RBP3.81□□□□□ -1.8
SCAF11-207ENST00000484275 PNLIPRP3Q17RR3 467 aa3.81□□□□□ -1.8
SCAF11-207ENST00000484275 SNAI3Q3KNW1 292 aa3.81□□□□□ -1.8
SCAF11-207ENST00000484275 PWWP2BQ6NUJ5 590 aa3.81□□□□□ -1.8
SCAF11-207ENST00000484275 CDC73Q6P1J9 531 aa3.81□□□□□ -1.8
SCAF11-207ENST00000484275 ZNF613Q6PF04 617 aa3.81□□□□□ -1.8
SCAF11-207ENST00000484275 SDCCAG8Q86SQ7 713 aaPredicted RBP3.81□□□□□ -1.8
SCAF11-207ENST00000484275 GRHL3Q8TE85 626 aa3.81□□□□□ -1.8
SCAF11-207ENST00000484275 HTRA1Q92743 480 aa3.81□□□□□ -1.8
SCAF11-207ENST00000484275 EGLN2Q96KS0 407 aa3.81□□□□□ -1.8
SCAF11-207ENST00000484275 SEMA3CQ99985 751 aa3.81□□□□□ -1.8
SCAF11-207ENST00000484275 RHNO1Q9BSD3 238 aa3.81□□□□□ -1.8
SCAF11-207ENST00000484275 SIL1Q9H173 461 aa3.81□□□□□ -1.8
SCAF11-207ENST00000484275 MAGIXQ9H6Y5 334 aa3.81□□□□□ -1.8
SCAF11-207ENST00000484275 PPCSQ9HAB8 311 aa3.81□□□□□ -1.8
SCAF11-207ENST00000484275 PLCXD1Q9NUJ7 323 aa3.81□□□□□ -1.8
SCAF11-207ENST00000484275 NOL12Q9UGY1 213 aaKnown RBP eCLIP3.81□□□□□ -1.8
SCAF11-207ENST00000484275 EXOGQ9Y2C4 368 aaKnown RBP3.81□□□□□ -1.8
SCAF11-207ENST00000484275 CYP46A1Q9Y6A2 500 aa3.81□□□□□ -1.8
SCAF11-207ENST00000484275 MAU2Q9Y6X3 613 aa3.81□□□□□ -1.8
SCAF11-207ENST00000484275 IGKV6D-41A0A0C4DH26 115 aa3.8□□□□□ -1.8
SCAF11-207ENST00000484275 PLPP2O43688 288 aa3.8□□□□□ -1.8
SCAF11-207ENST00000484275 BMP10O95393 424 aa3.8□□□□□ -1.8
SCAF11-207ENST00000484275 TYMPP19971 482 aa3.8□□□□□ -1.8
SCAF11-207ENST00000484275 EPHA2P29317 976 aa3.8□□□□□ -1.8
SCAF11-207ENST00000484275 F2RL1P55085 397 aa3.8□□□□□ -1.8
SCAF11-207ENST00000484275 EIF3BP55884 814 aaKnown RBP3.8□□□□□ -1.8
SCAF11-207ENST00000484275 ENPP2Q13822 863 aa3.8□□□□□ -1.8
SCAF11-207ENST00000484275 XKR6Q5GH73 641 aa3.8□□□□□ -1.8
SCAF11-207ENST00000484275 LCE3AQ5TA76 89 aa3.8□□□□□ -1.8
SCAF11-207ENST00000484275 NDUFAF5Q5TEU4 345 aa3.8□□□□□ -1.8
SCAF11-207ENST00000484275 METTL7BQ6UX53 244 aa3.8□□□□□ -1.8
SCAF11-207ENST00000484275 PTOV1Q86YD1 416 aa3.8□□□□□ -1.8
SCAF11-207ENST00000484275 EMC1Q8N766 993 aa3.8□□□□□ -1.8
SCAF11-207ENST00000484275 OR2T12Q8NG77 320 aa3.8□□□□□ -1.8
SCAF11-207ENST00000484275 SAAL1Q96ER3 474 aa3.8□□□□□ -1.8
SCAF11-207ENST00000484275 SLC47A1Q96FL8 570 aa3.8□□□□□ -1.8
SCAF11-207ENST00000484275 CCDC177Q9NQR7 707 aaPredicted RBP3.8□□□□□ -1.8
SCAF11-207ENST00000484275 B3GALT5Q9Y2C3 310 aa3.8□□□□□ -1.8
SCAF11-207ENST00000484275 TMEM184BQ9Y519 407 aaPredicted RBP3.8□□□□□ -1.8
SCAF11-207ENST00000484275 A0A1W2PQF6 199 aa3.79□□□□□ -1.8
SCAF11-207ENST00000484275 HOXC11O43248 304 aaPredicted RBP3.79□□□□□ -1.8
SCAF11-207ENST00000484275 PAGE4O60829 102 aa3.79□□□□□ -1.8
SCAF11-207ENST00000484275 GCNT3O95395 438 aa3.79□□□□□ -1.8
SCAF11-207ENST00000484275 MOCS3O95396 460 aa3.79□□□□□ -1.8
SCAF11-207ENST00000484275 EML2O95834 649 aa3.79□□□□□ -1.8
SCAF11-207ENST00000484275 FRMD6-AS1P0C7T7 363 aa3.79□□□□□ -1.8
SCAF11-207ENST00000484275 FAM157CP0CG43 387 aa3.79□□□□□ -1.8
SCAF11-207ENST00000484275 HSD3B1P14060 373 aa3.79□□□□□ -1.8
SCAF11-207ENST00000484275 SELLP14151 372 aa3.79□□□□□ -1.8
SCAF11-207ENST00000484275 GATA2P23769 480 aaPredicted RBP3.79□□□□□ -1.8
SCAF11-207ENST00000484275 EPHA8P29322 1005 aaPredicted RBP3.79□□□□□ -1.8
SCAF11-207ENST00000484275 ARL1P40616 181 aaPredicted RBP3.79□□□□□ -1.8
SCAF11-207ENST00000484275 CD81P60033 236 aa3.79□□□□□ -1.8
SCAF11-207ENST00000484275 GTDC1Q4AE62 458 aa3.79□□□□□ -1.8
SCAF11-207ENST00000484275 ASPRV1Q53RT3 343 aa3.79□□□□□ -1.8
SCAF11-207ENST00000484275 P2RY8Q86VZ1 359 aa3.79□□□□□ -1.8
SCAF11-207ENST00000484275 C1orf52Q8N6N3 182 aaKnown RBP3.79□□□□□ -1.8
SCAF11-207ENST00000484275 PAF1Q8N7H5 531 aa3.79□□□□□ -1.8
SCAF11-207ENST00000484275 ZNF614Q8N883 585 aa3.79□□□□□ -1.8
SCAF11-207ENST00000484275 AMER3Q8N944 861 aa3.79□□□□□ -1.8
SCAF11-207ENST00000484275 ANKRD42Q8N9B4 389 aa3.79□□□□□ -1.8
SCAF11-207ENST00000484275 GFI1Q99684 422 aa3.79□□□□□ -1.8
SCAF11-207ENST00000484275 PIP5K1AQ99755 562 aa3.79□□□□□ -1.8
SCAF11-207ENST00000484275 RTP3Q9BQQ7 232 aa3.79□□□□□ -1.8
SCAF11-207ENST00000484275 STRA6Q9BX79 667 aa3.79□□□□□ -1.8
SCAF11-207ENST00000484275 MTMR10Q9NXD2 777 aa3.79□□□□□ -1.8
SCAF11-207ENST00000484275 YIPF1Q9Y548 306 aa3.79□□□□□ -1.8
SCAF11-207ENST00000484275 SRSF10O75494 262 aaKnown RBP3.78□□□□□ -1.8
SCAF11-207ENST00000484275 TRMUO75648 421 aaKnown RBP3.78□□□□□ -1.8
SCAF11-207ENST00000484275 HRH2P25021 359 aa3.78□□□□□ -1.8
SCAF11-207ENST00000484275 THOP1P52888 689 aa3.78□□□□□ -1.8
SCAF11-207ENST00000484275 CTSCP53634 463 aa3.78□□□□□ -1.8
SCAF11-207ENST00000484275 KRTAP12-2P59991 146 aa3.78□□□□□ -1.8
SCAF11-207ENST00000484275 CEBPZQ03701 1054 aaKnown RBP3.78□□□□□ -1.8
SCAF11-207ENST00000484275 FRG1Q14331 258 aaKnown RBP3.78□□□□□ -1.8
SCAF11-207ENST00000484275 TCTEX1D4Q5JR98 221 aa3.78□□□□□ -1.8
SCAF11-207ENST00000484275 LRIF1Q5T3J3 769 aa3.78□□□□□ -1.8
SCAF11-207ENST00000484275 GSTA5Q7RTV2 222 aa3.78□□□□□ -1.8
SCAF11-207ENST00000484275 ISCA2Q86U28 154 aa3.78□□□□□ -1.8
SCAF11-207ENST00000484275 PLD3Q8IV08 490 aa3.78□□□□□ -1.8
SCAF11-207ENST00000484275 CNTROBQ8N137 903 aa3.78□□□□□ -1.8
SCAF11-207ENST00000484275 GCSAMQ8N6F7 178 aa3.78□□□□□ -1.8
SCAF11-207ENST00000484275 MRGPRDQ8TDS7 321 aa3.78□□□□□ -1.8
SCAF11-207ENST00000484275 ST8SIA4Q92187 359 aa3.78□□□□□ -1.8
SCAF11-207ENST00000484275 SEMA4DQ92854 862 aa3.78□□□□□ -1.8
SCAF11-207ENST00000484275 MBNL1Q9NR56 388 aaKnown RBP3.78□□□□□ -1.8
SCAF11-207ENST00000484275 UBA2Q9UBT2 640 aaPredicted RBP3.78□□□□□ -1.8
SCAF11-207ENST00000484275 DGKBQ9Y6T7 804 aa3.78□□□□□ -1.8
SCAF11-207ENST00000484275 A0A1W2PRG0 241 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms