RNA–Protein interactions for RNA: ENST00000483922.1

UBR4-213, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-213ENST00000483922 PRKCIP41743 596 aa12.63□□□□□ -0.39
UBR4-213ENST00000483922 CD86P42081 329 aa12.63□□□□□ -0.39
UBR4-213ENST00000483922 NOP2P46087 812 aaKnown RBP12.63□□□□□ -0.39
UBR4-213ENST00000483922 GBE1Q04446 702 aa12.63□□□□□ -0.39
UBR4-213ENST00000483922 GPS2Q13227 327 aa12.63□□□□□ -0.39
UBR4-213ENST00000483922 TUBB3Q13509 450 aa12.63□□□□□ -0.39
UBR4-213ENST00000483922 DPYSL3Q14195 570 aa12.63□□□□□ -0.39
UBR4-213ENST00000483922 GALNT3Q14435 633 aa12.63□□□□□ -0.39
UBR4-213ENST00000483922 INSCQ1MX18 579 aa12.63□□□□□ -0.39
UBR4-213ENST00000483922 AGAP9Q5VTM2 703 aa12.63□□□□□ -0.39
UBR4-213ENST00000483922 SLC6A19Q695T7 634 aa12.63□□□□□ -0.39
UBR4-213ENST00000483922 WASH2PQ6VEQ5 465 aa12.63□□□□□ -0.39
UBR4-213ENST00000483922 RBM43Q6ZSC3 357 aaKnown RBP12.63□□□□□ -0.39
UBR4-213ENST00000483922 SYVN1Q86TM6 617 aa12.63□□□□□ -0.39
UBR4-213ENST00000483922 TICAM1Q8IUC6 712 aa12.63□□□□□ -0.39
UBR4-213ENST00000483922 LRRC49Q8IUZ0 686 aa12.63□□□□□ -0.39
UBR4-213ENST00000483922 PQLC3Q8N755 202 aa12.63□□□□□ -0.39
UBR4-213ENST00000483922 FATE1Q969F0 183 aa12.63□□□□□ -0.39
UBR4-213ENST00000483922 PPM1MQ96MI6 270 aa12.63□□□□□ -0.39
UBR4-213ENST00000483922 NUP85Q9BW27 656 aa12.63□□□□□ -0.39
UBR4-213ENST00000483922 WASH6PQ9NQA3 447 aa12.63□□□□□ -0.39
UBR4-213ENST00000483922 POT1Q9NUX5 634 aa12.63□□□□□ -0.39
UBR4-213ENST00000483922 AIPL1Q9NZN9 384 aa12.63□□□□□ -0.39
UBR4-213ENST00000483922 RARRES3Q9UL19 164 aa12.63□□□□□ -0.39
UBR4-213ENST00000483922 DNPEPQ9ULA0 475 aa12.63□□□□□ -0.39
UBR4-213ENST00000483922 SHOC2Q9UQ13 582 aa12.63□□□□□ -0.39
UBR4-213ENST00000483922 TTLL3Q9Y4R7 772 aa12.63□□□□□ -0.39
UBR4-213ENST00000483922 AKAP9Q99996 3911 aa12.63□□□□□ -0.39
UBR4-213ENST00000483922 PDZD2O15018 2839 aa12.63□□□□□ -0.39
UBR4-213ENST00000483922 APCP25054 2843 aa12.63□□□□□ -0.39
UBR4-213ENST00000483922 PDZK1P1A8MUH7 402 aa12.62□□□□□ -0.39
UBR4-213ENST00000483922 KMOO15229 486 aa12.62□□□□□ -0.39
UBR4-213ENST00000483922 DDX3YO15523 660 aaKnown RBP12.62□□□□□ -0.39
UBR4-213ENST00000483922 TPM2P07951 284 aa12.62□□□□□ -0.39
UBR4-213ENST00000483922 BPIP17213 487 aa12.62□□□□□ -0.39
UBR4-213ENST00000483922 ZBTB17Q13105 803 aa12.62□□□□□ -0.39
UBR4-213ENST00000483922 PLEKHN1Q494U1 663 aaPredicted RBP12.62□□□□□ -0.39
UBR4-213ENST00000483922 PLEKHS1Q5SXH7 462 aa12.62□□□□□ -0.39
UBR4-213ENST00000483922 FBXO38Q6PIJ6 1188 aa12.62□□□□□ -0.39
UBR4-213ENST00000483922 FAM83HQ6ZRV2 1179 aaPredicted RBP12.62□□□□□ -0.39
UBR4-213ENST00000483922 LRRTM4Q86VH4 590 aa12.62□□□□□ -0.39
UBR4-213ENST00000483922 TRIM48Q8IWZ4 208 aa12.62□□□□□ -0.39
UBR4-213ENST00000483922 TRAM1L1Q8N609 369 aa12.62□□□□□ -0.39
UBR4-213ENST00000483922 NIPA2Q8N8Q9 360 aa12.62□□□□□ -0.39
UBR4-213ENST00000483922 AVL9Q8NBF6 648 aa12.62□□□□□ -0.39
UBR4-213ENST00000483922 SIDT2Q8NBJ9 832 aaKnown RBP12.62□□□□□ -0.39
UBR4-213ENST00000483922 ZNF501Q96CX3 271 aaPredicted RBP12.62□□□□□ -0.39
UBR4-213ENST00000483922 SNRNP40Q96DI7 357 aaKnown RBP12.62□□□□□ -0.39
UBR4-213ENST00000483922 ZDHHC12Q96GR4 267 aa12.62□□□□□ -0.39
UBR4-213ENST00000483922 FCRL4Q96PJ5 515 aa12.62□□□□□ -0.39
UBR4-213ENST00000483922 TIMM29Q9BSF4 260 aa12.62□□□□□ -0.39
UBR4-213ENST00000483922 CHST8Q9H2A9 424 aa12.62□□□□□ -0.39
UBR4-213ENST00000483922 ZFYVE1Q9HBF4 777 aa12.62□□□□□ -0.39
UBR4-213ENST00000483922 PDE7BQ9NP56 450 aa12.62□□□□□ -0.39
UBR4-213ENST00000483922 ACSS2Q9NR19 701 aa12.62□□□□□ -0.39
UBR4-213ENST00000483922 FGF21Q9NSA1 209 aa12.62□□□□□ -0.39
UBR4-213ENST00000483922 AMACRQ9UHK6 382 aa12.62□□□□□ -0.39
UBR4-213ENST00000483922 MYO6Q9UM54 1294 aa12.62□□□□□ -0.39
UBR4-213ENST00000483922 SPO11Q9Y5K1 396 aa12.62□□□□□ -0.39
UBR4-213ENST00000483922 A6NL46 340 aa12.61□□□□□ -0.39
UBR4-213ENST00000483922 GPR89AB7ZAQ6 455 aa12.61□□□□□ -0.39
UBR4-213ENST00000483922 ZNF185O15231 689 aa12.61□□□□□ -0.39
UBR4-213ENST00000483922 JCHAINP01591 159 aa12.61□□□□□ -0.39
UBR4-213ENST00000483922 CCDC172P0C7W6 258 aa12.61□□□□□ -0.39
UBR4-213ENST00000483922 GPR89BP0CG08 455 aa12.61□□□□□ -0.39
UBR4-213ENST00000483922 FECHP22830 423 aa12.61□□□□□ -0.39
UBR4-213ENST00000483922 TMEM115Q12893 351 aaPredicted RBP12.61□□□□□ -0.39
UBR4-213ENST00000483922 PIGHQ14442 188 aaPredicted RBP12.61□□□□□ -0.39
UBR4-213ENST00000483922 NR6A1Q15406 480 aa12.61□□□□□ -0.39
UBR4-213ENST00000483922 GPR19Q15760 415 aa12.61□□□□□ -0.39
UBR4-213ENST00000483922 ASIC2Q16515 512 aa12.61□□□□□ -0.39
UBR4-213ENST00000483922 RPE65Q16518 533 aa12.61□□□□□ -0.39
UBR4-213ENST00000483922 IFI16Q16666 785 aaKnown RBP12.61□□□□□ -0.39
UBR4-213ENST00000483922 CRB2Q5IJ48 1285 aa12.61□□□□□ -0.39
UBR4-213ENST00000483922 ZNF569Q5MCW4 686 aa12.61□□□□□ -0.39
UBR4-213ENST00000483922 C1QL3Q5VWW1 255 aa12.61□□□□□ -0.39
UBR4-213ENST00000483922 IZUMO3Q5VZ72 239 aa12.61□□□□□ -0.39
UBR4-213ENST00000483922 PPP1R2P3Q6NXS1 205 aa12.61□□□□□ -0.39
UBR4-213ENST00000483922 TMEM151BQ8IW70 566 aa12.61□□□□□ -0.39
UBR4-213ENST00000483922 D2HGDHQ8N465 521 aa12.61□□□□□ -0.39
UBR4-213ENST00000483922 ZBTB2Q8N680 514 aa12.61□□□□□ -0.39
UBR4-213ENST00000483922 CCHCR1Q8TD31 782 aa12.61□□□□□ -0.39
UBR4-213ENST00000483922 UBXN4Q92575 508 aa12.61□□□□□ -0.39
UBR4-213ENST00000483922 TADA1Q96BN2 335 aa12.61□□□□□ -0.39
UBR4-213ENST00000483922 ZNF514Q96K75 400 aaPredicted RBP12.61□□□□□ -0.39
UBR4-213ENST00000483922 THAP2Q9H0W7 228 aa12.61□□□□□ -0.39
UBR4-213ENST00000483922 ASF1BQ9NVP2 202 aa12.61□□□□□ -0.39
UBR4-213ENST00000483922 NFKBIL1Q9UBC1 381 aaPredicted RBP12.61□□□□□ -0.39
UBR4-213ENST00000483922 SCINQ9Y6U3 715 aa12.61□□□□□ -0.39
UBR4-213ENST00000483922 KCNK1O00180 336 aa12.6□□□□□ -0.39
UBR4-213ENST00000483922 SCRG1O75711 98 aa12.6□□□□□ -0.39
UBR4-213ENST00000483922 CDK14O94921 469 aa12.6□□□□□ -0.39
UBR4-213ENST00000483922 LCA5LO95447 670 aa12.6□□□□□ -0.39
UBR4-213ENST00000483922 PRF1P14222 555 aa12.6□□□□□ -0.39
UBR4-213ENST00000483922 IDSP22304 550 aa12.6□□□□□ -0.39
UBR4-213ENST00000483922 HNRNPH3P31942 346 aaKnown RBP12.6□□□□□ -0.39
UBR4-213ENST00000483922 CTSCP53634 463 aa12.6□□□□□ -0.39
UBR4-213ENST00000483922 TAS2R40P59535 323 aa12.6□□□□□ -0.39
UBR4-213ENST00000483922 DCDC1P59894 354 aa12.6□□□□□ -0.39
UBR4-213ENST00000483922 RPS15P62841 145 aaKnown RBP12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms