RNA–Protein interactions for RNA: ENST00000483847.1

SMARCC1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-205ENST00000483847 SLC25A14O95258 325 aaPredicted RBP10.65□□□□□ -0.7
SMARCC1-205ENST00000483847 CAPN1P07384 714 aa10.65□□□□□ -0.7
SMARCC1-205ENST00000483847 ZNF7P17097 686 aaPredicted RBP10.65□□□□□ -0.7
SMARCC1-205ENST00000483847 EEF1GP26641 437 aaKnown RBP10.65□□□□□ -0.7
SMARCC1-205ENST00000483847 IL1R2P27930 398 aa10.65□□□□□ -0.7
SMARCC1-205ENST00000483847 VAV2P52735 878 aa10.65□□□□□ -0.7
SMARCC1-205ENST00000483847 ACY1Q03154 408 aa10.65□□□□□ -0.7
SMARCC1-205ENST00000483847 ATP1A4Q13733 1029 aa10.65□□□□□ -0.7
SMARCC1-205ENST00000483847 ELOAQ14241 798 aaKnown RBP10.65□□□□□ -0.7
SMARCC1-205ENST00000483847 DPYSL2Q16555 572 aa10.65□□□□□ -0.7
SMARCC1-205ENST00000483847 SMTNL2Q2TAL5 461 aa10.65□□□□□ -0.7
SMARCC1-205ENST00000483847 KHDC1Q4VXA5 237 aaKnown RBP10.65□□□□□ -0.7
SMARCC1-205ENST00000483847 ALS2CLQ60I27 953 aa10.65□□□□□ -0.7
SMARCC1-205ENST00000483847 PLEKHA7Q6IQ23 1121 aa10.65□□□□□ -0.7
SMARCC1-205ENST00000483847 POLNQ7Z5Q5 900 aa10.65□□□□□ -0.7
SMARCC1-205ENST00000483847 BPHLQ86WA6 291 aaPredicted RBP10.65□□□□□ -0.7
SMARCC1-205ENST00000483847 TMEM126BQ8IUX1 230 aa10.65□□□□□ -0.7
SMARCC1-205ENST00000483847 PSTKQ8IV42 348 aaKnown RBP10.65□□□□□ -0.7
SMARCC1-205ENST00000483847 MCEMP1Q8IX19 187 aa10.65□□□□□ -0.7
SMARCC1-205ENST00000483847 RAVER1Q8IY67 606 aaKnown RBP10.65□□□□□ -0.7
SMARCC1-205ENST00000483847 TTC30BQ8N4P2 665 aa10.65□□□□□ -0.7
SMARCC1-205ENST00000483847 ZBTB2Q8N680 514 aa10.65□□□□□ -0.7
SMARCC1-205ENST00000483847 GPR26Q8NDV2 337 aa10.65□□□□□ -0.7
SMARCC1-205ENST00000483847 GPR150Q8NGU9 434 aa10.65□□□□□ -0.7
SMARCC1-205ENST00000483847 ARRDC2Q8TBH0 407 aa10.65□□□□□ -0.7
SMARCC1-205ENST00000483847 ZNF501Q96CX3 271 aaPredicted RBP10.65□□□□□ -0.7
SMARCC1-205ENST00000483847 CXorf40BQ96DE9 158 aa10.65□□□□□ -0.7
SMARCC1-205ENST00000483847 CSPG4P5Q96PW8 444 aa10.65□□□□□ -0.7
SMARCC1-205ENST00000483847 BARD1Q99728 777 aaKnown RBP10.65□□□□□ -0.7
SMARCC1-205ENST00000483847 POLR1EQ9GZS1 481 aaKnown RBP10.65□□□□□ -0.7
SMARCC1-205ENST00000483847 ZWILCHQ9H900 591 aa10.65□□□□□ -0.7
SMARCC1-205ENST00000483847 TRIM39Q9HCM9 518 aa10.65□□□□□ -0.7
SMARCC1-205ENST00000483847 PARVAQ9NVD7 372 aa10.65□□□□□ -0.7
SMARCC1-205ENST00000483847 PKD2L2Q9NZM6 624 aa10.65□□□□□ -0.7
SMARCC1-205ENST00000483847 TCFL5Q9UL49 500 aa10.65□□□□□ -0.7
SMARCC1-205ENST00000483847 G3BP2Q9UN86 482 aaKnown RBP10.65□□□□□ -0.7
SMARCC1-205ENST00000483847 B3GNT3Q9Y2A9 372 aa10.65□□□□□ -0.7
SMARCC1-205ENST00000483847 WDR37Q9Y2I8 494 aa10.65□□□□□ -0.7
SMARCC1-205ENST00000483847 CCDC168Q8NDH2 2452 aa10.64□□□□□ -0.71
SMARCC1-205ENST00000483847 MEN1O00255 615 aa10.64□□□□□ -0.71
SMARCC1-205ENST00000483847 KMOO15229 486 aa10.64□□□□□ -0.71
SMARCC1-205ENST00000483847 LRRTM2O43300 516 aa10.64□□□□□ -0.71
SMARCC1-205ENST00000483847 RNF8O76064 485 aa10.64□□□□□ -0.71
SMARCC1-205ENST00000483847 JCHAINP01591 159 aa10.64□□□□□ -0.71
SMARCC1-205ENST00000483847 CA5AP35218 305 aa10.64□□□□□ -0.71
SMARCC1-205ENST00000483847 ARL4AP40617 200 aa10.64□□□□□ -0.71
SMARCC1-205ENST00000483847 ARL4DP49703 201 aa10.64□□□□□ -0.71
SMARCC1-205ENST00000483847 ZNF135P52742 658 aaPredicted RBP10.64□□□□□ -0.71
SMARCC1-205ENST00000483847 NIPAL4Q0D2K0 466 aa10.64□□□□□ -0.71
SMARCC1-205ENST00000483847 NAA30Q147X3 362 aaPredicted RBP10.64□□□□□ -0.71
SMARCC1-205ENST00000483847 KRT31Q15323 416 aa10.64□□□□□ -0.71
SMARCC1-205ENST00000483847 KYNUQ16719 465 aa10.64□□□□□ -0.71
SMARCC1-205ENST00000483847 QPCTQ16769 361 aa10.64□□□□□ -0.71
SMARCC1-205ENST00000483847 ANKRD20A8PQ5CZ79 823 aa10.64□□□□□ -0.71
SMARCC1-205ENST00000483847 ZNF569Q5MCW4 686 aa10.64□□□□□ -0.71
SMARCC1-205ENST00000483847 PLEKHS1Q5SXH7 462 aa10.64□□□□□ -0.71
SMARCC1-205ENST00000483847 AGAP9Q5VTM2 703 aa10.64□□□□□ -0.71
SMARCC1-205ENST00000483847 SP5Q6BEB4 398 aaPredicted RBP10.64□□□□□ -0.71
SMARCC1-205ENST00000483847 ALG1LQ6GMV1 187 aa10.64□□□□□ -0.71
SMARCC1-205ENST00000483847 MED25Q71SY5 747 aa10.64□□□□□ -0.71
SMARCC1-205ENST00000483847 LRRTM4Q86VH4 590 aa10.64□□□□□ -0.71
SMARCC1-205ENST00000483847 ZC3H18Q86VM9 953 aaKnown RBP10.64□□□□□ -0.71
SMARCC1-205ENST00000483847 TMEM102Q8N9M5 508 aaPredicted RBP10.64□□□□□ -0.71
SMARCC1-205ENST00000483847 LRRN4Q8WUT4 740 aa10.64□□□□□ -0.71
SMARCC1-205ENST00000483847 UBE2Q2Q8WVN8 375 aa10.64□□□□□ -0.71
SMARCC1-205ENST00000483847 HSPH1Q92598 858 aa10.64□□□□□ -0.71
SMARCC1-205ENST00000483847 ZNF653Q96CK0 615 aa10.64□□□□□ -0.71
SMARCC1-205ENST00000483847 PPM1MQ96MI6 270 aa10.64□□□□□ -0.71
SMARCC1-205ENST00000483847 TIMM29Q9BSF4 260 aa10.64□□□□□ -0.71
SMARCC1-205ENST00000483847 SPATA16Q9BXB7 569 aa10.64□□□□□ -0.71
SMARCC1-205ENST00000483847 PCDH9Q9HC56 1237 aa10.64□□□□□ -0.71
SMARCC1-205ENST00000483847 KCND1Q9NSA2 647 aa10.64□□□□□ -0.71
SMARCC1-205ENST00000483847 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.64□□□□□ -0.71
SMARCC1-205ENST00000483847 DNPEPQ9ULA0 475 aa10.64□□□□□ -0.71
SMARCC1-205ENST00000483847 TTLL3Q9Y4R7 772 aa10.64□□□□□ -0.71
SMARCC1-205ENST00000483847 COPG1Q9Y678 874 aaKnown RBP10.64□□□□□ -0.71
SMARCC1-205ENST00000483847 SPTBP11277 2137 aa10.64□□□□□ -0.71
SMARCC1-205ENST00000483847 PIKFYVEQ9Y2I7 2098 aa10.64□□□□□ -0.71
SMARCC1-205ENST00000483847 MDC1Q14676 2089 aaKnown RBP10.63□□□□□ -0.71
SMARCC1-205ENST00000483847 RGSL1A5PLK6 1076 aa10.63□□□□□ -0.71
SMARCC1-205ENST00000483847 ZG16O60844 167 aa10.63□□□□□ -0.71
SMARCC1-205ENST00000483847 LCA5LO95447 670 aa10.63□□□□□ -0.71
SMARCC1-205ENST00000483847 RAB40ALP0C0E4 278 aa10.63□□□□□ -0.71
SMARCC1-205ENST00000483847 IDSP22304 550 aa10.63□□□□□ -0.71
SMARCC1-205ENST00000483847 FECHP22830 423 aa10.63□□□□□ -0.71
SMARCC1-205ENST00000483847 TUBB4BP68371 445 aa10.63□□□□□ -0.71
SMARCC1-205ENST00000483847 HSD11B2P80365 405 aa10.63□□□□□ -0.71
SMARCC1-205ENST00000483847 ABRQ12979 859 aa10.63□□□□□ -0.71
SMARCC1-205ENST00000483847 TUBB2AQ13885 445 aa10.63□□□□□ -0.71
SMARCC1-205ENST00000483847 ZRSR2Q15696 482 aaKnown RBP10.63□□□□□ -0.71
SMARCC1-205ENST00000483847 DNTTIP2Q5QJE6 756 aaKnown RBP10.63□□□□□ -0.71
SMARCC1-205ENST00000483847 VWA5B1Q5TIE3 1220 aa10.63□□□□□ -0.71
SMARCC1-205ENST00000483847 TXNRD3NBQ6F5E7 133 aa10.63□□□□□ -0.71
SMARCC1-205ENST00000483847 FBXO38Q6PIJ6 1188 aa10.63□□□□□ -0.71
SMARCC1-205ENST00000483847 FAM198BQ6UWH4 519 aa10.63□□□□□ -0.71
SMARCC1-205ENST00000483847 WASH2PQ6VEQ5 465 aa10.63□□□□□ -0.71
SMARCC1-205ENST00000483847 C11orf96Q7Z7L8 435 aa10.63□□□□□ -0.71
SMARCC1-205ENST00000483847 RBM12BQ8IXT5 1001 aaKnown RBP10.63□□□□□ -0.71
SMARCC1-205ENST00000483847 DSELQ8IZU8 1212 aa10.63□□□□□ -0.71
SMARCC1-205ENST00000483847 D2HGDHQ8N465 521 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms