RNA–Protein interactions for RNA: ENST00000483544.1

LINC00477-201, long intergenic non-protein coding RNA 477, humanhuman

TSL 2 BASIC

Gene LINC00477, Length 1,710 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00477-201ENST00000483544 TRIM64A6NGJ6 449 aa12.37□□□□□ -0.43
LINC00477-201ENST00000483544 PSMD11O00231 422 aa12.37□□□□□ -0.43
LINC00477-201ENST00000483544 PSMD12O00232 456 aaPredicted RBP12.37□□□□□ -0.43
LINC00477-201ENST00000483544 SNAP91O60641 907 aa12.37□□□□□ -0.43
LINC00477-201ENST00000483544 RAMP2O60895 175 aa12.37□□□□□ -0.43
LINC00477-201ENST00000483544 ASGR1P07306 291 aa12.37□□□□□ -0.43
LINC00477-201ENST00000483544 ATP6V1B1P15313 513 aa12.37□□□□□ -0.43
LINC00477-201ENST00000483544 ATF6P18850 670 aa12.37□□□□□ -0.43
LINC00477-201ENST00000483544 FDXRP22570 491 aa12.37□□□□□ -0.43
LINC00477-201ENST00000483544 YWHAQP27348 245 aa12.37□□□□□ -0.43
LINC00477-201ENST00000483544 RRM2P31350 389 aa12.37□□□□□ -0.43
LINC00477-201ENST00000483544 EVI2BP34910 448 aa12.37□□□□□ -0.43
LINC00477-201ENST00000483544 TRIM23P36406 574 aa12.37□□□□□ -0.43
LINC00477-201ENST00000483544 BMPR1AP36894 532 aa12.37□□□□□ -0.43
LINC00477-201ENST00000483544 CHRNA4P43681 627 aa12.37□□□□□ -0.43
LINC00477-201ENST00000483544 ETV1P50549 477 aa12.37□□□□□ -0.43
LINC00477-201ENST00000483544 PSME3P61289 254 aa12.37□□□□□ -0.43
LINC00477-201ENST00000483544 ESRRGP62508 458 aa12.37□□□□□ -0.43
LINC00477-201ENST00000483544 CEACAM7Q14002 265 aa12.37□□□□□ -0.43
LINC00477-201ENST00000483544 SELPLGQ14242 412 aa12.37□□□□□ -0.43
LINC00477-201ENST00000483544 TRIM25Q14258 630 aaKnown RBP12.37□□□□□ -0.43
LINC00477-201ENST00000483544 FASTKQ14296 549 aaKnown RBP12.37□□□□□ -0.43
LINC00477-201ENST00000483544 ZNF460Q14592 562 aa12.37□□□□□ -0.43
LINC00477-201ENST00000483544 POLD3Q15054 466 aaPredicted RBP12.37□□□□□ -0.43
LINC00477-201ENST00000483544 PLA2G4EQ3MJ16 856 aa12.37□□□□□ -0.43
LINC00477-201ENST00000483544 C5orf22Q49AR2 442 aa12.37□□□□□ -0.43
LINC00477-201ENST00000483544 PPM1LQ5SGD2 360 aa12.37□□□□□ -0.43
LINC00477-201ENST00000483544 RBM20Q5T481 1227 aaKnown RBP12.37□□□□□ -0.43
LINC00477-201ENST00000483544 SLC24A5Q71RS6 500 aa12.37□□□□□ -0.43
LINC00477-201ENST00000483544 EFL1Q7Z2Z2 1120 aaKnown RBP12.37□□□□□ -0.43
LINC00477-201ENST00000483544 METTL3Q86U44 580 aaKnown RBP12.37□□□□□ -0.43
LINC00477-201ENST00000483544 ZNF354CQ86Y25 554 aa12.37□□□□□ -0.43
LINC00477-201ENST00000483544 KIAA1958Q8N8K9 716 aa12.37□□□□□ -0.43
LINC00477-201ENST00000483544 ASCC1Q8N9N2 400 aaKnown RBP12.37□□□□□ -0.43
LINC00477-201ENST00000483544 C2orf15Q8WU43 125 aaKnown RBP12.37□□□□□ -0.43
LINC00477-201ENST00000483544 TSPEARQ8WU66 669 aa12.37□□□□□ -0.43
LINC00477-201ENST00000483544 VPS33AQ96AX1 596 aa12.37□□□□□ -0.43
LINC00477-201ENST00000483544 ISOC1Q96CN7 298 aa12.37□□□□□ -0.43
LINC00477-201ENST00000483544 DCUN1D1Q96GG9 259 aa12.37□□□□□ -0.43
LINC00477-201ENST00000483544 CNDP2Q96KP4 475 aaKnown RBP12.37□□□□□ -0.43
LINC00477-201ENST00000483544 ALPK1Q96QP1 1244 aa12.37□□□□□ -0.43
LINC00477-201ENST00000483544 TRIM15Q9C019 465 aa12.37□□□□□ -0.43
LINC00477-201ENST00000483544 MKRN2Q9H000 416 aaKnown RBP12.37□□□□□ -0.43
LINC00477-201ENST00000483544 VPS9D1Q9Y2B5 631 aa12.37□□□□□ -0.43
LINC00477-201ENST00000483544 AP3M1Q9Y2T2 418 aa12.37□□□□□ -0.43
LINC00477-201ENST00000483544 GPSM3Q9Y4H4 160 aa12.37□□□□□ -0.43
LINC00477-201ENST00000483544 TRAF6Q9Y4K3 522 aa12.37□□□□□ -0.43
LINC00477-201ENST00000483544 PRAMEF11O60813 436 aa12.36□□□□□ -0.43
LINC00477-201ENST00000483544 RPP40O75818 363 aaKnown RBP12.36□□□□□ -0.43
LINC00477-201ENST00000483544 FGF18O76093 207 aa12.36□□□□□ -0.43
LINC00477-201ENST00000483544 GLP2RO95838 553 aa12.36□□□□□ -0.43
LINC00477-201ENST00000483544 XRCC1P18887 633 aaPredicted RBP12.36□□□□□ -0.43
LINC00477-201ENST00000483544 PSMA3P25788 255 aa12.36□□□□□ -0.43
LINC00477-201ENST00000483544 PRKAR1BP31321 381 aa12.36□□□□□ -0.43
LINC00477-201ENST00000483544 CCR10P46092 362 aa12.36□□□□□ -0.43
LINC00477-201ENST00000483544 MRPL19P49406 292 aaKnown RBP12.36□□□□□ -0.43
LINC00477-201ENST00000483544 HERVK_113P63132 956 aa12.36□□□□□ -0.43
LINC00477-201ENST00000483544 ITKQ08881 620 aa12.36□□□□□ -0.43
LINC00477-201ENST00000483544 PEX6Q13608 980 aa12.36□□□□□ -0.43
LINC00477-201ENST00000483544 MRPL58Q14197 206 aaKnown RBP12.36□□□□□ -0.43
LINC00477-201ENST00000483544 SIRPB2Q5JXA9 342 aa12.36□□□□□ -0.43
LINC00477-201ENST00000483544 SAMD4BQ5PRF9 694 aaKnown RBP12.36□□□□□ -0.43
LINC00477-201ENST00000483544 ZNF678Q5SXM1 525 aa12.36□□□□□ -0.43
LINC00477-201ENST00000483544 CST9Q5W186 159 aa12.36□□□□□ -0.43
LINC00477-201ENST00000483544 COLGALT2Q8IYK4 626 aa12.36□□□□□ -0.43
LINC00477-201ENST00000483544 CLYBLQ8N0X4 340 aa12.36□□□□□ -0.43
LINC00477-201ENST00000483544 GALNT4Q8N4A0 578 aa12.36□□□□□ -0.43
LINC00477-201ENST00000483544 SLAIN1Q8ND83 568 aa12.36□□□□□ -0.43
LINC00477-201ENST00000483544 LHFPL5Q8TAF8 219 aa12.36□□□□□ -0.43
LINC00477-201ENST00000483544 ARRDC2Q8TBH0 407 aa12.36□□□□□ -0.43
LINC00477-201ENST00000483544 HASPINQ8TF76 798 aa12.36□□□□□ -0.43
LINC00477-201ENST00000483544 BCL7CQ8WUZ0 217 aaPredicted RBP12.36□□□□□ -0.43
LINC00477-201ENST00000483544 ZUFSPQ96AP4 578 aa12.36□□□□□ -0.43
LINC00477-201ENST00000483544 FAM193BQ96PV7 902 aaPredicted RBP12.36□□□□□ -0.43
LINC00477-201ENST00000483544 ERVK-6Q9BXR3 956 aa12.36□□□□□ -0.43
LINC00477-201ENST00000483544 GSTO2Q9H4Y5 243 aa12.36□□□□□ -0.43
LINC00477-201ENST00000483544 TFB2MQ9H5Q4 396 aaKnown RBP12.36□□□□□ -0.43
LINC00477-201ENST00000483544 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.36□□□□□ -0.43
LINC00477-201ENST00000483544 TMEM45AQ9NWC5 275 aa12.36□□□□□ -0.43
LINC00477-201ENST00000483544 DAPK2Q9UIK4 370 aa12.36□□□□□ -0.43
LINC00477-201ENST00000483544 LDB2O43679 373 aa12.35□□□□□ -0.43
LINC00477-201ENST00000483544 ACSL4O60488 711 aa12.35□□□□□ -0.43
LINC00477-201ENST00000483544 SORBS2O94875 1100 aaKnown RBP12.35□□□□□ -0.43
LINC00477-201ENST00000483544 F7P08709 466 aaPredicted RBP12.35□□□□□ -0.43
LINC00477-201ENST00000483544 SLC10A3P09131 477 aa12.35□□□□□ -0.43
LINC00477-201ENST00000483544 ATXN1LP0C7T5 689 aaKnown RBP12.35□□□□□ -0.43
LINC00477-201ENST00000483544 SLC9A3P48764 834 aa12.35□□□□□ -0.43
LINC00477-201ENST00000483544 BMXP51813 675 aa12.35□□□□□ -0.43
LINC00477-201ENST00000483544 SLC10A7Q0GE19 358 aa12.35□□□□□ -0.43
LINC00477-201ENST00000483544 CDC20Q12834 499 aa12.35□□□□□ -0.43
LINC00477-201ENST00000483544 SP140Q13342 867 aa12.35□□□□□ -0.43
LINC00477-201ENST00000483544 KCNA10Q16322 511 aa12.35□□□□□ -0.43
LINC00477-201ENST00000483544 COQ5Q5HYK3 327 aa12.35□□□□□ -0.43
LINC00477-201ENST00000483544 TMEM198Q66K66 360 aa12.35□□□□□ -0.43
LINC00477-201ENST00000483544 RGMBQ6NW40 437 aa12.35□□□□□ -0.43
LINC00477-201ENST00000483544 AKAP14Q86UN6 197 aa12.35□□□□□ -0.43
LINC00477-201ENST00000483544 HIPK4Q8NE63 616 aa12.35□□□□□ -0.43
LINC00477-201ENST00000483544 BHLHE22Q8NFJ8 381 aaPredicted RBP12.35□□□□□ -0.43
LINC00477-201ENST00000483544 OR6P1Q8NGX9 317 aa12.35□□□□□ -0.43
LINC00477-201ENST00000483544 SHKBP1Q8TBC3 707 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms