RNA–Protein interactions for RNA: ENST00000483117.1

LAPTM4A-202, Transcript of lysosomal protein transmembrane 4 alpha, humanhuman

TSL 2

Gene LAPTM4A, Length 487 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4A-202ENST00000483117 FAM110AQ9BQ89 295 aa2.91□□□□□ -1.94
LAPTM4A-202ENST00000483117 AGXT2Q9BYV1 514 aa2.91□□□□□ -1.94
LAPTM4A-202ENST00000483117 INTS2Q9H0H0 1204 aaKnown RBP2.91□□□□□ -1.94
LAPTM4A-202ENST00000483117 TFB2MQ9H5Q4 396 aaKnown RBP2.91□□□□□ -1.94
LAPTM4A-202ENST00000483117 SLC52A3Q9NQ40 469 aa2.91□□□□□ -1.94
LAPTM4A-202ENST00000483117 BEX4Q9NWD9 120 aaPredicted RBP2.91□□□□□ -1.94
LAPTM4A-202ENST00000483117 ZNF624Q9P2J8 865 aaPredicted RBP2.91□□□□□ -1.94
LAPTM4A-202ENST00000483117 MTRRQ9UBK8 725 aa2.91□□□□□ -1.94
LAPTM4A-202ENST00000483117 MORF4L1Q9UBU8 362 aa2.91□□□□□ -1.94
LAPTM4A-202ENST00000483117 ACSL5Q9ULC5 683 aa2.91□□□□□ -1.94
LAPTM4A-202ENST00000483117 ERVK-11Q9UQG0 969 aa2.91□□□□□ -1.94
LAPTM4A-202ENST00000483117 SMAD5-AS1Q9Y6J3 95 aa2.91□□□□□ -1.94
LAPTM4A-202ENST00000483117 SOS1Q07889 1333 aaPredicted RBP2.91□□□□□ -1.94
LAPTM4A-202ENST00000483117 GPRASP1Q5JY77 1395 aa2.9□□□□□ -1.94
LAPTM4A-202ENST00000483117 TEX13CA0A0J9YWL9 993 aa2.9□□□□□ -1.95
LAPTM4A-202ENST00000483117 TNPO2O14787 897 aaKnown RBP2.9□□□□□ -1.95
LAPTM4A-202ENST00000483117 CPLX1O14810 134 aa2.9□□□□□ -1.95
LAPTM4A-202ENST00000483117 TSPAN4O14817 238 aa2.9□□□□□ -1.95
LAPTM4A-202ENST00000483117 SYNGR3O43761 229 aa2.9□□□□□ -1.95
LAPTM4A-202ENST00000483117 DOK2O60496 412 aa2.9□□□□□ -1.95
LAPTM4A-202ENST00000483117 CIDEAO60543 219 aa2.9□□□□□ -1.95
LAPTM4A-202ENST00000483117 NR2F1P10589 423 aa2.9□□□□□ -1.95
LAPTM4A-202ENST00000483117 STMN1P16949 149 aa2.9□□□□□ -1.95
LAPTM4A-202ENST00000483117 ABCD3P28288 659 aa2.9□□□□□ -1.95
LAPTM4A-202ENST00000483117 ATP5DP30049 168 aa2.9□□□□□ -1.95
LAPTM4A-202ENST00000483117 KRT2P35908 639 aa2.9□□□□□ -1.95
LAPTM4A-202ENST00000483117 GGT5P36269 586 aa2.9□□□□□ -1.95
LAPTM4A-202ENST00000483117 ATP6V1E1P36543 226 aa2.9□□□□□ -1.95
LAPTM4A-202ENST00000483117 AMPHP49418 695 aa2.9□□□□□ -1.95
LAPTM4A-202ENST00000483117 CCR9P51686 369 aa2.9□□□□□ -1.95
LAPTM4A-202ENST00000483117 ZNF131P52739 623 aa2.9□□□□□ -1.95
LAPTM4A-202ENST00000483117 CSNK2A1P68400 391 aaPredicted RBP2.9□□□□□ -1.95
LAPTM4A-202ENST00000483117 FOXM1Q08050 763 aa2.9□□□□□ -1.95
LAPTM4A-202ENST00000483117 NEXNQ0ZGT2 675 aa2.9□□□□□ -1.95
LAPTM4A-202ENST00000483117 EPS8Q12929 822 aa2.9□□□□□ -1.95
LAPTM4A-202ENST00000483117 CHAF1BQ13112 559 aa2.9□□□□□ -1.95
LAPTM4A-202ENST00000483117 RASA2Q15283 850 aa2.9□□□□□ -1.95
LAPTM4A-202ENST00000483117 SLC1A5Q15758 541 aa2.9□□□□□ -1.95
LAPTM4A-202ENST00000483117 LPAL2Q16609 132 aa2.9□□□□□ -1.95
LAPTM4A-202ENST00000483117 GLIPR1L2Q4G1C9 344 aa2.9□□□□□ -1.95
LAPTM4A-202ENST00000483117 TMEM35AQ53FP2 167 aa2.9□□□□□ -1.95
LAPTM4A-202ENST00000483117 FAM69AQ5T7M9 428 aa2.9□□□□□ -1.95
LAPTM4A-202ENST00000483117 GPR139Q6DWJ6 353 aa2.9□□□□□ -1.95
LAPTM4A-202ENST00000483117 NAA16Q6N069 864 aaPredicted RBP2.9□□□□□ -1.95
LAPTM4A-202ENST00000483117 TTI2Q6NXR4 508 aa2.9□□□□□ -1.95
LAPTM4A-202ENST00000483117 BRAT1Q6PJG6 821 aa2.9□□□□□ -1.95
LAPTM4A-202ENST00000483117 R3HCC1LQ7Z5L2 792 aaKnown RBP2.9□□□□□ -1.95
LAPTM4A-202ENST00000483117 IQCA1Q86XH1 822 aa2.9□□□□□ -1.95
LAPTM4A-202ENST00000483117 APLFQ8IW19 511 aaPredicted RBP2.9□□□□□ -1.95
LAPTM4A-202ENST00000483117 ADSSL1Q8N142 457 aa2.9□□□□□ -1.95
LAPTM4A-202ENST00000483117 BEST3Q8N1M1 668 aa2.9□□□□□ -1.95
LAPTM4A-202ENST00000483117 CSNK2A3Q8NEV1 391 aa2.9□□□□□ -1.95
LAPTM4A-202ENST00000483117 OR8H1Q8NGG4 311 aa2.9□□□□□ -1.95
LAPTM4A-202ENST00000483117 ZCCHC10Q8TBK6 192 aa2.9□□□□□ -1.95
LAPTM4A-202ENST00000483117 SLC38A5Q8WUX1 472 aa2.9□□□□□ -1.95
LAPTM4A-202ENST00000483117 TM9SF4Q92544 642 aa2.9□□□□□ -1.95
LAPTM4A-202ENST00000483117 TBC1D31Q96DN5 1066 aa2.9□□□□□ -1.95
LAPTM4A-202ENST00000483117 SCRN2Q96FV2 425 aa2.9□□□□□ -1.95
LAPTM4A-202ENST00000483117 LRR1Q96L50 414 aa2.9□□□□□ -1.95
LAPTM4A-202ENST00000483117 QRFPRQ96P65 431 aa2.9□□□□□ -1.95
LAPTM4A-202ENST00000483117 MYCBPQ99417 103 aaPredicted RBP2.9□□□□□ -1.95
LAPTM4A-202ENST00000483117 NEURL2Q9BR09 285 aa2.9□□□□□ -1.95
LAPTM4A-202ENST00000483117 FUZQ9BT04 418 aa2.9□□□□□ -1.95
LAPTM4A-202ENST00000483117 RABEP2Q9H5N1 569 aa2.9□□□□□ -1.95
LAPTM4A-202ENST00000483117 SEBOXQ9HB31 216 aaPredicted RBP2.9□□□□□ -1.95
LAPTM4A-202ENST00000483117 VEZTQ9HBM0 779 aa2.9□□□□□ -1.95
LAPTM4A-202ENST00000483117 EIF2B3Q9NR50 452 aaKnown RBP2.9□□□□□ -1.95
LAPTM4A-202ENST00000483117 FRMD4AQ9P2Q2 1039 aaPredicted RBP2.9□□□□□ -1.95
LAPTM4A-202ENST00000483117 TBC1D29Q9UFV1 150 aa2.9□□□□□ -1.95
LAPTM4A-202ENST00000483117 RASAL2Q9UJF2 1139 aa2.9□□□□□ -1.95
LAPTM4A-202ENST00000483117 TMCC3Q9ULS5 477 aa2.9□□□□□ -1.95
LAPTM4A-202ENST00000483117 A4GNTQ9UNA3 340 aa2.9□□□□□ -1.95
LAPTM4A-202ENST00000483117 KNSTRNQ9Y448 316 aa2.9□□□□□ -1.95
LAPTM4A-202ENST00000483117 KIAA1210Q9ULL0 1709 aa2.9□□□□□ -1.95
LAPTM4A-202ENST00000483117 HHLA1C9JL84 531 aa2.89□□□□□ -1.95
LAPTM4A-202ENST00000483117 PI4K2BG5E9Z4 385 aa2.89□□□□□ -1.95
LAPTM4A-202ENST00000483117 NR5A2O00482 541 aa2.89□□□□□ -1.95
LAPTM4A-202ENST00000483117 AP3D1O14617 1153 aa2.89□□□□□ -1.95
LAPTM4A-202ENST00000483117 PSMA7O14818 248 aa2.89□□□□□ -1.95
LAPTM4A-202ENST00000483117 PRKNO60260 465 aaPredicted RBP2.89□□□□□ -1.95
LAPTM4A-202ENST00000483117 PTP4A3O75365 173 aa2.89□□□□□ -1.95
LAPTM4A-202ENST00000483117 CSPG5O95196 566 aa2.89□□□□□ -1.95
LAPTM4A-202ENST00000483117 CCNDBP1O95273 360 aa2.89□□□□□ -1.95
LAPTM4A-202ENST00000483117 BAG4O95429 457 aaKnown RBP2.89□□□□□ -1.95
LAPTM4A-202ENST00000483117 HSPA4LO95757 839 aa2.89□□□□□ -1.95
LAPTM4A-202ENST00000483117 QDPRP09417 244 aa2.89□□□□□ -1.95
LAPTM4A-202ENST00000483117 FAM106CPP0CH98 169 aa2.89□□□□□ -1.95
LAPTM4A-202ENST00000483117 IRF1P10914 325 aa2.89□□□□□ -1.95
LAPTM4A-202ENST00000483117 PORP16435 677 aaPredicted RBP2.89□□□□□ -1.95
LAPTM4A-202ENST00000483117 SP100P23497 879 aaPredicted RBP2.89□□□□□ -1.95
LAPTM4A-202ENST00000483117 EEF1DP29692 281 aaKnown RBP2.89□□□□□ -1.95
LAPTM4A-202ENST00000483117 NNMTP40261 264 aa2.89□□□□□ -1.95
LAPTM4A-202ENST00000483117 RARSP54136 660 aaKnown RBP2.89□□□□□ -1.95
LAPTM4A-202ENST00000483117 TAS2R38P59533 333 aa2.89□□□□□ -1.95
LAPTM4A-202ENST00000483117 UFM1P61960 85 aa2.89□□□□□ -1.95
LAPTM4A-202ENST00000483117 GAGE5Q13069 117 aa2.89□□□□□ -1.95
LAPTM4A-202ENST00000483117 GAGE6Q13070 117 aa2.89□□□□□ -1.95
LAPTM4A-202ENST00000483117 PRPF4BQ13523 1007 aaKnown RBP2.89□□□□□ -1.95
LAPTM4A-202ENST00000483117 BECN1Q14457 450 aa2.89□□□□□ -1.95
LAPTM4A-202ENST00000483117 TSTQ16762 297 aaKnown RBP2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms