RNA–Protein interactions for RNA: ENST00000482728.1

SMIM4-204, Transcript of small integral membrane protein 4, humanhuman

TSL 2

Gene SMIM4, Length 456 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-204ENST00000482728 SLC9B2Q86UD5 537 aa18.09■□□□□ 0.49
SMIM4-204ENST00000482728 SERPINA9Q86WD7 417 aa18.09■□□□□ 0.49
SMIM4-204ENST00000482728 ZCCHC14Q8WYQ9 949 aaKnown RBP18.09■□□□□ 0.49
SMIM4-204ENST00000482728 CAPZA3Q96KX2 299 aa18.09■□□□□ 0.49
SMIM4-204ENST00000482728 SLC38A3Q99624 504 aa18.09■□□□□ 0.49
SMIM4-204ENST00000482728 SARS2Q9NP81 518 aaKnown RBP18.09■□□□□ 0.49
SMIM4-204ENST00000482728 ZDHHC3Q9NYG2 299 aa18.09■□□□□ 0.49
SMIM4-204ENST00000482728 KCNK4Q9NYG8 393 aa18.09■□□□□ 0.49
SMIM4-204ENST00000482728 RIMKLBQ9ULI2 386 aa18.09■□□□□ 0.49
SMIM4-204ENST00000482728 PCDHB1Q9Y5F3 818 aa18.09■□□□□ 0.49
SMIM4-204ENST00000482728 APC2O95996 2303 aa18.09■□□□□ 0.49
SMIM4-204ENST00000482728 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.08■□□□□ 0.48
SMIM4-204ENST00000482728 A6NCN8 305 aa18.08■□□□□ 0.48
SMIM4-204ENST00000482728 CASC3O15234 703 aaKnown RBP18.08■□□□□ 0.48
SMIM4-204ENST00000482728 TPSB2P20231 275 aa18.08■□□□□ 0.48
SMIM4-204ENST00000482728 PSMA3P25788 255 aa18.08■□□□□ 0.48
SMIM4-204ENST00000482728 RPL10P27635 214 aaKnown RBP18.08■□□□□ 0.48
SMIM4-204ENST00000482728 CDKN1CP49918 316 aaPredicted RBP18.08■□□□□ 0.48
SMIM4-204ENST00000482728 ARSDP51689 593 aa18.08■□□□□ 0.48
SMIM4-204ENST00000482728 HHEXQ03014 270 aa18.08■□□□□ 0.48
SMIM4-204ENST00000482728 PPP1R7Q15435 360 aa18.08■□□□□ 0.48
SMIM4-204ENST00000482728 TPSAB1Q15661 275 aa18.08■□□□□ 0.48
SMIM4-204ENST00000482728 SEPT7Q16181 437 aaKnown RBP18.08■□□□□ 0.48
SMIM4-204ENST00000482728 KCTD19Q17RG1 926 aaPredicted RBP18.08■□□□□ 0.48
SMIM4-204ENST00000482728 USP53Q70EK8 1073 aa18.08■□□□□ 0.48
SMIM4-204ENST00000482728 C11orf96Q7Z7L8 435 aa18.08■□□□□ 0.48
SMIM4-204ENST00000482728 TRIM48Q8IWZ4 208 aa18.08■□□□□ 0.48
SMIM4-204ENST00000482728 KDF1Q8NAX2 398 aaPredicted RBP18.08■□□□□ 0.48
SMIM4-204ENST00000482728 OR6P1Q8NGX9 317 aa18.08■□□□□ 0.48
SMIM4-204ENST00000482728 HDAC10Q969S8 669 aa18.08■□□□□ 0.48
SMIM4-204ENST00000482728 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.08■□□□□ 0.48
SMIM4-204ENST00000482728 TMEM74Q96NL1 305 aa18.08■□□□□ 0.48
SMIM4-204ENST00000482728 TTC1Q99614 292 aa18.08■□□□□ 0.48
SMIM4-204ENST00000482728 IL22Q9GZX6 179 aa18.08■□□□□ 0.48
SMIM4-204ENST00000482728 CPNE7Q9UBL6 633 aa18.08■□□□□ 0.48
SMIM4-204ENST00000482728 TCAF1Q9Y4C2 921 aa18.08■□□□□ 0.48
SMIM4-204ENST00000482728 CCDC162PA2VCL2 907 aa18.07■□□□□ 0.48
SMIM4-204ENST00000482728 KLHL33A6NCF5 533 aa18.07■□□□□ 0.48
SMIM4-204ENST00000482728 D6RAR5 112 aa18.07■□□□□ 0.48
SMIM4-204ENST00000482728 CPNE6O95741 557 aa18.07■□□□□ 0.48
SMIM4-204ENST00000482728 VIPP01282 170 aa18.07■□□□□ 0.48
SMIM4-204ENST00000482728 ATP1B2P14415 290 aaPredicted RBP18.07■□□□□ 0.48
SMIM4-204ENST00000482728 PBLDP30039 288 aaPredicted RBP18.07■□□□□ 0.48
SMIM4-204ENST00000482728 HALP42357 657 aa18.07■□□□□ 0.48
SMIM4-204ENST00000482728 PAFAH1B1P43034 410 aa18.07■□□□□ 0.48
SMIM4-204ENST00000482728 PRAMEP78395 509 aa18.07■□□□□ 0.48
SMIM4-204ENST00000482728 NR1D2Q14995 579 aa18.07■□□□□ 0.48
SMIM4-204ENST00000482728 RTP5Q14D33 572 aa18.07■□□□□ 0.48
SMIM4-204ENST00000482728 ST3GAL2Q16842 350 aa18.07■□□□□ 0.48
SMIM4-204ENST00000482728 AGAP9Q5VTM2 703 aa18.07■□□□□ 0.48
SMIM4-204ENST00000482728 LRRC8BQ6P9F7 803 aa18.07■□□□□ 0.48
SMIM4-204ENST00000482728 ABRAXAS1Q6UWZ7 409 aa18.07■□□□□ 0.48
SMIM4-204ENST00000482728 WASH2PQ6VEQ5 465 aa18.07■□□□□ 0.48
SMIM4-204ENST00000482728 PIM3Q86V86 326 aa18.07■□□□□ 0.48
SMIM4-204ENST00000482728 BEND7Q8N7W2 519 aaPredicted RBP18.07■□□□□ 0.48
SMIM4-204ENST00000482728 MDM1Q8TC05 714 aa18.07■□□□□ 0.48
SMIM4-204ENST00000482728 PEX13Q92968 403 aa18.07■□□□□ 0.48
SMIM4-204ENST00000482728 ATXN7L3BQ96GX2 97 aa18.07■□□□□ 0.48
SMIM4-204ENST00000482728 AHCYL2Q96HN2 611 aaKnown RBP18.07■□□□□ 0.48
SMIM4-204ENST00000482728 LDHAL6BQ9BYZ2 381 aaPredicted RBP18.07■□□□□ 0.48
SMIM4-204ENST00000482728 STRADBQ9C0K7 418 aa18.07■□□□□ 0.48
SMIM4-204ENST00000482728 WASH6PQ9NQA3 447 aa18.07■□□□□ 0.48
SMIM4-204ENST00000482728 CHRAC1Q9NRG0 131 aa18.07■□□□□ 0.48
SMIM4-204ENST00000482728 SLC2A6Q9UGQ3 507 aa18.07■□□□□ 0.48
SMIM4-204ENST00000482728 ATXN7L1Q9ULK2 861 aaPredicted RBP18.07■□□□□ 0.48
SMIM4-204ENST00000482728 ENTPD2Q9Y5L3 495 aa18.07■□□□□ 0.48
SMIM4-204ENST00000482728 FRYQ5TBA9 3013 aa18.07■□□□□ 0.48
SMIM4-204ENST00000482728 URB1O60287 2271 aaKnown RBP18.06■□□□□ 0.48
SMIM4-204ENST00000482728 TRBV5-4A0A0C4DH59 114 aa18.06■□□□□ 0.48
SMIM4-204ENST00000482728 MGAT4DA6NG13 374 aa18.06■□□□□ 0.48
SMIM4-204ENST00000482728 XRCC1P18887 633 aaPredicted RBP18.06■□□□□ 0.48
SMIM4-204ENST00000482728 ACRV1P26436 265 aa18.06■□□□□ 0.48
SMIM4-204ENST00000482728 DRG2P55039 364 aaKnown RBP18.06■□□□□ 0.48
SMIM4-204ENST00000482728 INHBCP55103 352 aa18.06■□□□□ 0.48
SMIM4-204ENST00000482728 DMPKQ09013 629 aa18.06■□□□□ 0.48
SMIM4-204ENST00000482728 CLPPQ16740 277 aaPredicted RBP18.06■□□□□ 0.48
SMIM4-204ENST00000482728 MAP9Q49MG5 647 aa18.06■□□□□ 0.48
SMIM4-204ENST00000482728 BCL7AQ4VC05 210 aa18.06■□□□□ 0.48
SMIM4-204ENST00000482728 CHCHD2P9Q5T1J5 151 aaPredicted RBP18.06■□□□□ 0.48
SMIM4-204ENST00000482728 ZNF761Q86XN6 746 aaPredicted RBP18.06■□□□□ 0.48
SMIM4-204ENST00000482728 PIANPQ8IYJ0 282 aa18.06■□□□□ 0.48
SMIM4-204ENST00000482728 OR13J1Q8NGT2 312 aa18.06■□□□□ 0.48
SMIM4-204ENST00000482728 OR10G6Q8NH81 332 aa18.06■□□□□ 0.48
SMIM4-204ENST00000482728 ZNF778Q96MU6 729 aa18.06■□□□□ 0.48
SMIM4-204ENST00000482728 FOXP3Q9BZS1 431 aa18.06■□□□□ 0.48
SMIM4-204ENST00000482728 ZMYND15Q9H091 742 aa18.06■□□□□ 0.48
SMIM4-204ENST00000482728 DDX47Q9H0S4 455 aaKnown RBP18.06■□□□□ 0.48
SMIM4-204ENST00000482728 RDH14Q9HBH5 336 aa18.06■□□□□ 0.48
SMIM4-204ENST00000482728 KCND1Q9NSA2 647 aa18.06■□□□□ 0.48
SMIM4-204ENST00000482728 FAM8A1Q9UBU6 413 aa18.06■□□□□ 0.48
SMIM4-204ENST00000482728 ANAPC5Q9UJX4 755 aa18.06■□□□□ 0.48
SMIM4-204ENST00000482728 ZNF106Q9H2Y7 1883 aaKnown RBP18.05■□□□□ 0.48
SMIM4-204ENST00000482728 TCRBV7S3A2A0A539 114 aa18.05■□□□□ 0.48
SMIM4-204ENST00000482728 OR51F1A6NGY5 319 aa18.05■□□□□ 0.48
SMIM4-204ENST00000482728 PRR19A6NJB7 356 aa18.05■□□□□ 0.48
SMIM4-204ENST00000482728 MPOP05164 745 aa18.05■□□□□ 0.48
SMIM4-204ENST00000482728 PRSS56P0CW18 603 aa18.05■□□□□ 0.48
SMIM4-204ENST00000482728 MGAT1P26572 445 aa18.05■□□□□ 0.48
SMIM4-204ENST00000482728 CD1CP29017 333 aa18.05■□□□□ 0.48
SMIM4-204ENST00000482728 PPARGP37231 505 aaPredicted RBP18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms