RNA–Protein interactions for RNA: ENST00000482590.1

CLK1-212, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 626 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-212ENST00000482590 HK1P19367 917 aa6.63□□□□□ -1.35
CLK1-212ENST00000482590 BTF3P20290 206 aaKnown RBP6.63□□□□□ -1.35
CLK1-212ENST00000482590 EPHA8P29322 1005 aaPredicted RBP6.63□□□□□ -1.35
CLK1-212ENST00000482590 NMT1P30419 496 aaKnown RBP6.63□□□□□ -1.35
CLK1-212ENST00000482590 LONP1P36776 959 aaKnown RBP6.63□□□□□ -1.35
CLK1-212ENST00000482590 PNPLA4P41247 253 aa6.63□□□□□ -1.35
CLK1-212ENST00000482590 PAFAH1B1P43034 410 aa6.63□□□□□ -1.35
CLK1-212ENST00000482590 ACOT2P49753 483 aa6.63□□□□□ -1.35
CLK1-212ENST00000482590 PTTG1IPP53801 180 aa6.63□□□□□ -1.35
CLK1-212ENST00000482590 YBEYP58557 167 aaPredicted RBP6.63□□□□□ -1.35
CLK1-212ENST00000482590 SLC26A5P58743 744 aa6.63□□□□□ -1.35
CLK1-212ENST00000482590 GTF2BQ00403 316 aa6.63□□□□□ -1.35
CLK1-212ENST00000482590 SMARCB1Q12824 385 aa6.63□□□□□ -1.35
CLK1-212ENST00000482590 NAA25Q14CX7 972 aa6.63□□□□□ -1.35
CLK1-212ENST00000482590 KARSQ15046 597 aaKnown RBP6.63□□□□□ -1.35
CLK1-212ENST00000482590 ZKSCAN8Q15776 578 aaPredicted RBP6.63□□□□□ -1.35
CLK1-212ENST00000482590 ZBTB6Q15916 424 aa6.63□□□□□ -1.35
CLK1-212ENST00000482590 FAM214AQ32MH5 1076 aa6.63□□□□□ -1.35
CLK1-212ENST00000482590 ITPRIPL2Q3MIP1 535 aa6.63□□□□□ -1.35
CLK1-212ENST00000482590 C9orf57Q5W0N0 161 aa6.63□□□□□ -1.35
CLK1-212ENST00000482590 ANO7Q6IWH7 933 aa6.63□□□□□ -1.35
CLK1-212ENST00000482590 KIAA0408Q6ZU52 694 aa6.63□□□□□ -1.35
CLK1-212ENST00000482590 CCDC186Q7Z3E2 898 aa6.63□□□□□ -1.35
CLK1-212ENST00000482590 TMEM110Q86TL2 294 aa6.63□□□□□ -1.35
CLK1-212ENST00000482590 KRT73Q86Y46 540 aa6.63□□□□□ -1.35
CLK1-212ENST00000482590 OR10T2Q8NGX3 314 aa6.63□□□□□ -1.35
CLK1-212ENST00000482590 GABPB2Q8TAK5 448 aaPredicted RBP6.63□□□□□ -1.35
CLK1-212ENST00000482590 POMGNT1Q8WZA1 660 aa6.63□□□□□ -1.35
CLK1-212ENST00000482590 MYO18AQ92614 2054 aaKnown RBP6.63□□□□□ -1.35
CLK1-212ENST00000482590 FAM162AQ96A26 154 aa6.63□□□□□ -1.35
CLK1-212ENST00000482590 VPS33AQ96AX1 596 aa6.63□□□□□ -1.35
CLK1-212ENST00000482590 RSPRY1Q96DX4 576 aa6.63□□□□□ -1.35
CLK1-212ENST00000482590 VPS39Q96JC1 886 aa6.63□□□□□ -1.35
CLK1-212ENST00000482590 TMX3Q96JJ7 454 aa6.63□□□□□ -1.35
CLK1-212ENST00000482590 ZFYVE19Q96K21 471 aa6.63□□□□□ -1.35
CLK1-212ENST00000482590 VRK1Q99986 396 aaPredicted RBP6.63□□□□□ -1.35
CLK1-212ENST00000482590 THUMPD3Q9BV44 507 aaKnown RBP6.63□□□□□ -1.35
CLK1-212ENST00000482590 FUT8Q9BYC5 575 aa6.63□□□□□ -1.35
CLK1-212ENST00000482590 PITHD1Q9GZP4 211 aaPredicted RBP6.63□□□□□ -1.35
CLK1-212ENST00000482590 ZCWPW1Q9H0M4 648 aa6.63□□□□□ -1.35
CLK1-212ENST00000482590 TASP1Q9H6P5 420 aa6.63□□□□□ -1.35
CLK1-212ENST00000482590 KIF9Q9HAQ2 790 aa6.63□□□□□ -1.35
CLK1-212ENST00000482590 MID1IP1Q9NPA3 183 aa6.63□□□□□ -1.35
CLK1-212ENST00000482590 SLC35C2Q9NQQ7 365 aa6.63□□□□□ -1.35
CLK1-212ENST00000482590 DPP3Q9NY33 737 aa6.63□□□□□ -1.35
CLK1-212ENST00000482590 TAB2Q9NYJ8 693 aa6.63□□□□□ -1.35
CLK1-212ENST00000482590 ADAMTS9Q9P2N4 1935 aa6.63□□□□□ -1.35
CLK1-212ENST00000482590 PCSK1NQ9UHG2 260 aa6.63□□□□□ -1.35
CLK1-212ENST00000482590 ZNHIT2Q9UHR6 403 aa6.63□□□□□ -1.35
CLK1-212ENST00000482590 AGO2Q9UKV8 859 aaKnown RBP6.63□□□□□ -1.35
CLK1-212ENST00000482590 EXOC7Q9UPT5 735 aa6.63□□□□□ -1.35
CLK1-212ENST00000482590 DNAJC16Q9Y2G8 782 aa6.63□□□□□ -1.35
CLK1-212ENST00000482590 C2CD2Q9Y426 696 aa6.63□□□□□ -1.35
CLK1-212ENST00000482590 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.63□□□□□ -1.35
CLK1-212ENST00000482590 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.63□□□□□ -1.35
CLK1-212ENST00000482590 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.62□□□□□ -1.35
CLK1-212ENST00000482590 VPS37CA5D8V6 355 aaPredicted RBP6.62□□□□□ -1.35
CLK1-212ENST00000482590 C2orf81A6NN90 581 aa6.62□□□□□ -1.35
CLK1-212ENST00000482590 H0YAE9 185 aa6.62□□□□□ -1.35
CLK1-212ENST00000482590 BTN3A1O00481 513 aa6.62□□□□□ -1.35
CLK1-212ENST00000482590 PIRO00625 290 aa6.62□□□□□ -1.35
CLK1-212ENST00000482590 CYB561D2O14569 222 aa6.62□□□□□ -1.35
CLK1-212ENST00000482590 EXOC3O60645 756 aa6.62□□□□□ -1.35
CLK1-212ENST00000482590 APOL3O95236 402 aa6.62□□□□□ -1.35
CLK1-212ENST00000482590 CCDC192P0DO97 292 aa6.62□□□□□ -1.35
CLK1-212ENST00000482590 HAPLN1P10915 354 aaPredicted RBP6.62□□□□□ -1.35
CLK1-212ENST00000482590 DDX6P26196 483 aaKnown RBP eCLIP6.62□□□□□ -1.35
CLK1-212ENST00000482590 RFC1P35251 1148 aaPredicted RBP6.62□□□□□ -1.35
CLK1-212ENST00000482590 PGM1P36871 562 aa6.62□□□□□ -1.35
CLK1-212ENST00000482590 BCAT1P54687 386 aa6.62□□□□□ -1.35
CLK1-212ENST00000482590 RPP30P78346 268 aaKnown RBP6.62□□□□□ -1.35
CLK1-212ENST00000482590 MYL7Q01449 175 aa6.62□□□□□ -1.35
CLK1-212ENST00000482590 SLC13A2Q13183 592 aa6.62□□□□□ -1.35
CLK1-212ENST00000482590 SRSF5Q13243 272 aaKnown RBP6.62□□□□□ -1.35
CLK1-212ENST00000482590 NFE2L1Q14494 772 aa6.62□□□□□ -1.35
CLK1-212ENST00000482590 KBTBD12Q3ZCT8 623 aa6.62□□□□□ -1.35
CLK1-212ENST00000482590 AASDHQ4L235 1098 aaPredicted RBP6.62□□□□□ -1.35
CLK1-212ENST00000482590 TMTC4Q5T4D3 741 aa6.62□□□□□ -1.35
CLK1-212ENST00000482590 FAM69AQ5T7M9 428 aa6.62□□□□□ -1.35
CLK1-212ENST00000482590 EMC10Q5UCC4 262 aa6.62□□□□□ -1.35
CLK1-212ENST00000482590 SLC39A4Q6P5W5 647 aa6.62□□□□□ -1.35
CLK1-212ENST00000482590 UNQ6494/PRO21346Q6UXR6 183 aa6.62□□□□□ -1.35
CLK1-212ENST00000482590 RRAGAQ7L523 313 aa6.62□□□□□ -1.35
CLK1-212ENST00000482590 RAB11FIP2Q7L804 512 aa6.62□□□□□ -1.35
CLK1-212ENST00000482590 PPP1R3BQ86XI6 285 aa6.62□□□□□ -1.35
CLK1-212ENST00000482590 SFR1Q86XK3 245 aa6.62□□□□□ -1.35
CLK1-212ENST00000482590 RHOT1Q8IXI2 618 aa6.62□□□□□ -1.35
CLK1-212ENST00000482590 GLB1L3Q8NCI6 653 aaPredicted RBP6.62□□□□□ -1.35
CLK1-212ENST00000482590 ANKRD20A12PQ8NF67 263 aa6.62□□□□□ -1.35
CLK1-212ENST00000482590 NFKBIDQ8NI38 313 aa6.62□□□□□ -1.35
CLK1-212ENST00000482590 METTL6Q8TCB7 284 aa6.62□□□□□ -1.35
CLK1-212ENST00000482590 NOC3LQ8WTT2 800 aaKnown RBP6.62□□□□□ -1.35
CLK1-212ENST00000482590 MRPS31Q92665 395 aaKnown RBP6.62□□□□□ -1.35
CLK1-212ENST00000482590 ARHGEF2Q92974 986 aaKnown RBP6.62□□□□□ -1.35
CLK1-212ENST00000482590 SYAP1Q96A49 352 aaPredicted RBP6.62□□□□□ -1.35
CLK1-212ENST00000482590 GBP5Q96PP8 586 aa6.62□□□□□ -1.35
CLK1-212ENST00000482590 SPXQ9BT56 116 aa6.62□□□□□ -1.35
CLK1-212ENST00000482590 ZNF518BQ9C0D4 1074 aa6.62□□□□□ -1.35
CLK1-212ENST00000482590 MMADHCQ9H3L0 296 aaPredicted RBP6.62□□□□□ -1.35
CLK1-212ENST00000482590 THAP9Q9H5L6 903 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms