RNA–Protein interactions for RNA: ENST00000482251.2

CPSF4-212, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-212ENST00000482251 STMND1H3BQB6 276 aa10.3□□□□□ -0.76
CPSF4-212ENST00000482251 CCL22O00626 93 aa10.3□□□□□ -0.76
CPSF4-212ENST00000482251 STX7O15400 261 aaKnown RBP10.3□□□□□ -0.76
CPSF4-212ENST00000482251 VEGFDO43915 354 aa10.3□□□□□ -0.76
CPSF4-212ENST00000482251 ANXA9O76027 345 aa10.3□□□□□ -0.76
CPSF4-212ENST00000482251 STK10O94804 968 aaKnown RBP10.3□□□□□ -0.76
CPSF4-212ENST00000482251 VIPP01282 170 aa10.3□□□□□ -0.76
CPSF4-212ENST00000482251 GPR89BP0CG08 455 aa10.3□□□□□ -0.76
CPSF4-212ENST00000482251 BRAFP15056 766 aa10.3□□□□□ -0.76
CPSF4-212ENST00000482251 SLC19A1P41440 591 aa10.3□□□□□ -0.76
CPSF4-212ENST00000482251 EPHA4P54764 986 aa10.3□□□□□ -0.76
CPSF4-212ENST00000482251 CYP4F2P78329 520 aa10.3□□□□□ -0.76
CPSF4-212ENST00000482251 TMPRSS15P98073 1019 aa10.3□□□□□ -0.76
CPSF4-212ENST00000482251 TMEM115Q12893 351 aaPredicted RBP10.3□□□□□ -0.76
CPSF4-212ENST00000482251 TRA2AQ13595 282 aaKnown RBP eCLIP10.3□□□□□ -0.76
CPSF4-212ENST00000482251 GPRC6AQ5T6X5 926 aa10.3□□□□□ -0.76
CPSF4-212ENST00000482251 PEX26Q7Z412 305 aa10.3□□□□□ -0.76
CPSF4-212ENST00000482251 C11orf96Q7Z7L8 435 aa10.3□□□□□ -0.76
CPSF4-212ENST00000482251 BEND7Q8N7W2 519 aaPredicted RBP10.3□□□□□ -0.76
CPSF4-212ENST00000482251 RASGEF1AQ8N9B8 481 aa10.3□□□□□ -0.76
CPSF4-212ENST00000482251 CCDC112Q8NEF3 446 aa10.3□□□□□ -0.76
CPSF4-212ENST00000482251 OR4K2Q8NGD2 314 aa10.3□□□□□ -0.76
CPSF4-212ENST00000482251 GPR150Q8NGU9 434 aa10.3□□□□□ -0.76
CPSF4-212ENST00000482251 RSC1A1Q92681 617 aa10.3□□□□□ -0.76
CPSF4-212ENST00000482251 SH3KBP1Q96B97 665 aa10.3□□□□□ -0.76
CPSF4-212ENST00000482251 CXorf40BQ96DE9 158 aa10.3□□□□□ -0.76
CPSF4-212ENST00000482251 TGM7Q96PF1 710 aa10.3□□□□□ -0.76
CPSF4-212ENST00000482251 TAAR9Q96RI9 348 aa10.3□□□□□ -0.76
CPSF4-212ENST00000482251 SRPK1Q96SB4 655 aaKnown RBP10.3□□□□□ -0.76
CPSF4-212ENST00000482251 FERMT1Q9BQL6 677 aa10.3□□□□□ -0.76
CPSF4-212ENST00000482251 TIMM29Q9BSF4 260 aa10.3□□□□□ -0.76
CPSF4-212ENST00000482251 ZCCHC2Q9C0B9 1178 aaKnown RBP10.3□□□□□ -0.76
CPSF4-212ENST00000482251 APMAPQ9HDC9 416 aa10.3□□□□□ -0.76
CPSF4-212ENST00000482251 OGFRQ9NZT2 677 aa10.3□□□□□ -0.76
CPSF4-212ENST00000482251 HACD3Q9P035 362 aa10.3□□□□□ -0.76
CPSF4-212ENST00000482251 PSMD13Q9UNM6 376 aa10.3□□□□□ -0.76
CPSF4-212ENST00000482251 WDR37Q9Y2I8 494 aa10.3□□□□□ -0.76
CPSF4-212ENST00000482251 PCDHB11Q9Y5F2 797 aa10.3□□□□□ -0.76
CPSF4-212ENST00000482251 PCDHGA4Q9Y5G9 962 aa10.3□□□□□ -0.76
CPSF4-212ENST00000482251 SLC30A1Q9Y6M5 507 aa10.3□□□□□ -0.76
CPSF4-212ENST00000482251 CAPN6Q9Y6Q1 641 aa10.3□□□□□ -0.76
CPSF4-212ENST00000482251 LILRA5A6NI73 299 aa10.29□□□□□ -0.76
CPSF4-212ENST00000482251 OR5K4A6NMS3 321 aa10.29□□□□□ -0.76
CPSF4-212ENST00000482251 UBXN7O94888 489 aa10.29□□□□□ -0.76
CPSF4-212ENST00000482251 TJP3O95049 919 aa10.29□□□□□ -0.76
CPSF4-212ENST00000482251 EPOP01588 193 aa10.29□□□□□ -0.76
CPSF4-212ENST00000482251 VCLP18206 1134 aa10.29□□□□□ -0.76
CPSF4-212ENST00000482251 PTPN7P35236 360 aa10.29□□□□□ -0.76
CPSF4-212ENST00000482251 CETN2P41208 172 aa10.29□□□□□ -0.76
CPSF4-212ENST00000482251 LEPRP48357 1165 aaKnown RBP10.29□□□□□ -0.76
CPSF4-212ENST00000482251 SEPHS1P49903 392 aa10.29□□□□□ -0.76
CPSF4-212ENST00000482251 CLCNKAP51800 687 aa10.29□□□□□ -0.76
CPSF4-212ENST00000482251 C19orf57Q0VDD7 668 aa10.29□□□□□ -0.76
CPSF4-212ENST00000482251 SQSTM1Q13501 440 aa10.29□□□□□ -0.76
CPSF4-212ENST00000482251 GPR18Q14330 331 aa10.29□□□□□ -0.76
CPSF4-212ENST00000482251 NFE2L1Q14494 772 aa10.29□□□□□ -0.76
CPSF4-212ENST00000482251 PRPSAP1Q14558 356 aa10.29□□□□□ -0.76
CPSF4-212ENST00000482251 CLCA4Q14CN2 919 aa10.29□□□□□ -0.76
CPSF4-212ENST00000482251 FNBP1LQ5T0N5 605 aa10.29□□□□□ -0.76
CPSF4-212ENST00000482251 DUS1LQ6P1R4 473 aaKnown RBP10.29□□□□□ -0.76
CPSF4-212ENST00000482251 TMEM220Q6QAJ8 160 aa10.29□□□□□ -0.76
CPSF4-212ENST00000482251 WDR74Q6RFH5 385 aaPredicted RBP10.29□□□□□ -0.76
CPSF4-212ENST00000482251 FAM83HQ6ZRV2 1179 aaPredicted RBP10.29□□□□□ -0.76
CPSF4-212ENST00000482251 TMEM26Q6ZUK4 368 aa10.29□□□□□ -0.76
CPSF4-212ENST00000482251 DTX1Q86Y01 620 aa10.29□□□□□ -0.76
CPSF4-212ENST00000482251 ZNF843Q8N446 348 aa10.29□□□□□ -0.76
CPSF4-212ENST00000482251 IL22RA1Q8N6P7 574 aa10.29□□□□□ -0.76
CPSF4-212ENST00000482251 FAM71DQ8N9W8 422 aa10.29□□□□□ -0.76
CPSF4-212ENST00000482251 DDHD1Q8NEL9 900 aa10.29□□□□□ -0.76
CPSF4-212ENST00000482251 OR13C4Q8NGS5 318 aa10.29□□□□□ -0.76
CPSF4-212ENST00000482251 SNRNP27Q8WVK2 155 aaKnown RBP10.29□□□□□ -0.76
CPSF4-212ENST00000482251 EXTL1Q92935 676 aa10.29□□□□□ -0.76
CPSF4-212ENST00000482251 SPATA13Q96N96 652 aa10.29□□□□□ -0.76
CPSF4-212ENST00000482251 DPYSL5Q9BPU6 564 aa10.29□□□□□ -0.76
CPSF4-212ENST00000482251 TBL1YQ9BQ87 522 aa10.29□□□□□ -0.76
CPSF4-212ENST00000482251 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.29□□□□□ -0.76
CPSF4-212ENST00000482251 PIH1D1Q9NWS0 290 aaKnown RBP10.29□□□□□ -0.76
CPSF4-212ENST00000482251 AMFRQ9UKV5 643 aa10.29□□□□□ -0.76
CPSF4-212ENST00000482251 R3HDM2Q9Y2K5 976 aaKnown RBP10.29□□□□□ -0.76
CPSF4-212ENST00000482251 CFAP20Q9Y6A4 193 aaKnown RBP10.29□□□□□ -0.76
CPSF4-212ENST00000482251 MN1Q10571 1320 aaPredicted RBP10.29□□□□□ -0.76
CPSF4-212ENST00000482251 TCRBV7S2A1N4TA0A589 114 aa10.28□□□□□ -0.76
CPSF4-212ENST00000482251 CCDC78A2IDD5 438 aa10.28□□□□□ -0.76
CPSF4-212ENST00000482251 PRR19A6NJB7 356 aa10.28□□□□□ -0.76
CPSF4-212ENST00000482251 TK2O00142 265 aa10.28□□□□□ -0.76
CPSF4-212ENST00000482251 DDX3YO15523 660 aaKnown RBP10.28□□□□□ -0.76
CPSF4-212ENST00000482251 RAD1O60671 282 aa10.28□□□□□ -0.76
CPSF4-212ENST00000482251 POP7O75817 140 aaKnown RBP10.28□□□□□ -0.76
CPSF4-212ENST00000482251 RASSF9O75901 435 aa10.28□□□□□ -0.76
CPSF4-212ENST00000482251 AMD1P17707 334 aa10.28□□□□□ -0.76
CPSF4-212ENST00000482251 XRCC1P18887 633 aaPredicted RBP10.28□□□□□ -0.76
CPSF4-212ENST00000482251 MSH3P20585 1137 aa10.28□□□□□ -0.76
CPSF4-212ENST00000482251 LPOP22079 712 aaPredicted RBP10.28□□□□□ -0.76
CPSF4-212ENST00000482251 IDSP22304 550 aa10.28□□□□□ -0.76
CPSF4-212ENST00000482251 CD82P27701 267 aa10.28□□□□□ -0.76
CPSF4-212ENST00000482251 ADRA1AP35348 466 aa10.28□□□□□ -0.76
CPSF4-212ENST00000482251 HALP42357 657 aa10.28□□□□□ -0.76
CPSF4-212ENST00000482251 ATP1A2P50993 1020 aa10.28□□□□□ -0.76
CPSF4-212ENST00000482251 GDF10P55107 478 aa10.28□□□□□ -0.76
CPSF4-212ENST00000482251 PPP1CAP62136 330 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms