RNA–Protein interactions for RNA: ENST00000482217.1

VPS41-212, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 951 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-212ENST00000482217 EVI2BP34910 448 aa4.12□□□□□ -1.75
VPS41-212ENST00000482217 FOLR3P41439 243 aa4.12□□□□□ -1.75
VPS41-212ENST00000482217 ARHGAP25P42331 645 aa4.12□□□□□ -1.75
VPS41-212ENST00000482217 GABRB2P47870 512 aa4.12□□□□□ -1.75
VPS41-212ENST00000482217 ME1P48163 572 aa4.12□□□□□ -1.75
VPS41-212ENST00000482217 SLC11A1P49279 550 aa4.12□□□□□ -1.75
VPS41-212ENST00000482217 PGDP52209 483 aa4.12□□□□□ -1.75
VPS41-212ENST00000482217 BLVRAP53004 296 aa4.12□□□□□ -1.75
VPS41-212ENST00000482217 TAS2R40P59535 323 aa4.12□□□□□ -1.75
VPS41-212ENST00000482217 B2MP61769 119 aa4.12□□□□□ -1.75
VPS41-212ENST00000482217 TUBA1BP68363 451 aa4.12□□□□□ -1.75
VPS41-212ENST00000482217 GAD2Q05329 585 aa4.12□□□□□ -1.75
VPS41-212ENST00000482217 HSPA14Q0VDF9 509 aa4.12□□□□□ -1.75
VPS41-212ENST00000482217 SNTB2Q13425 540 aaKnown RBP4.12□□□□□ -1.75
VPS41-212ENST00000482217 XRCC4Q13426 336 aa4.12□□□□□ -1.75
VPS41-212ENST00000482217 GRAPQ13588 217 aa4.12□□□□□ -1.75
VPS41-212ENST00000482217 GIT2Q14161 759 aa4.12□□□□□ -1.75
VPS41-212ENST00000482217 SLC39A14Q15043 492 aa4.12□□□□□ -1.75
VPS41-212ENST00000482217 PGM5Q15124 567 aa4.12□□□□□ -1.75
VPS41-212ENST00000482217 TAZQ16635 292 aa4.12□□□□□ -1.75
VPS41-212ENST00000482217 USH1GQ495M9 461 aa4.12□□□□□ -1.75
VPS41-212ENST00000482217 IGSF11Q5DX21 431 aa4.12□□□□□ -1.75
VPS41-212ENST00000482217 CBWD5Q5RIA9 395 aa4.12□□□□□ -1.75
VPS41-212ENST00000482217 SPATA46Q5T0L3 261 aa4.12□□□□□ -1.75
VPS41-212ENST00000482217 ATAD3BQ5T9A4 648 aa4.12□□□□□ -1.75
VPS41-212ENST00000482217 LIN9Q5TKA1 542 aa4.12□□□□□ -1.75
VPS41-212ENST00000482217 HHATQ5VTY9 493 aa4.12□□□□□ -1.75
VPS41-212ENST00000482217 PLA2G4FQ68DD2 849 aa4.12□□□□□ -1.75
VPS41-212ENST00000482217 KIAA0895LQ68EN5 471 aa4.12□□□□□ -1.75
VPS41-212ENST00000482217 WBP2NLQ6ICG8 309 aa4.12□□□□□ -1.75
VPS41-212ENST00000482217 DGAT2L7PQ6IED9 249 aa4.12□□□□□ -1.75
VPS41-212ENST00000482217 OR6B2Q6IFH4 312 aa4.12□□□□□ -1.75
VPS41-212ENST00000482217 KDM7AQ6ZMT4 941 aa4.12□□□□□ -1.75
VPS41-212ENST00000482217 C15orf39Q6ZRI6 1047 aa4.12□□□□□ -1.75
VPS41-212ENST00000482217 TUBA1AQ71U36 451 aa4.12□□□□□ -1.75
VPS41-212ENST00000482217 SYVN1Q86TM6 617 aa4.12□□□□□ -1.75
VPS41-212ENST00000482217 RHPN2Q8IUC4 686 aa4.12□□□□□ -1.75
VPS41-212ENST00000482217 GRAMD2AQ8IUY3 354 aa4.12□□□□□ -1.75
VPS41-212ENST00000482217 RASGRP3Q8IV61 690 aa4.12□□□□□ -1.75
VPS41-212ENST00000482217 KLHL7Q8IXQ5 586 aa4.12□□□□□ -1.75
VPS41-212ENST00000482217 SCYL3Q8IZE3 742 aa4.12□□□□□ -1.75
VPS41-212ENST00000482217 MINDY1Q8N5J2 469 aa4.12□□□□□ -1.75
VPS41-212ENST00000482217 UXS1Q8NBZ7 420 aa4.12□□□□□ -1.75
VPS41-212ENST00000482217 CDC26Q8NHZ8 85 aa4.12□□□□□ -1.75
VPS41-212ENST00000482217 ERMNQ8TAM6 284 aa4.12□□□□□ -1.75
VPS41-212ENST00000482217 ACTRT2Q8TDY3 377 aa4.12□□□□□ -1.75
VPS41-212ENST00000482217 TMEM171Q8WVE6 324 aa4.12□□□□□ -1.75
VPS41-212ENST00000482217 STARD8Q92502 1023 aa4.12□□□□□ -1.75
VPS41-212ENST00000482217 CPT1BQ92523 772 aa4.12□□□□□ -1.75
VPS41-212ENST00000482217 KAT2BQ92831 832 aa4.12□□□□□ -1.75
VPS41-212ENST00000482217 FKBP10Q96AY3 582 aa4.12□□□□□ -1.75
VPS41-212ENST00000482217 ZNF707Q96C28 371 aaPredicted RBP4.12□□□□□ -1.75
VPS41-212ENST00000482217 RSPRY1Q96DX4 576 aa4.12□□□□□ -1.75
VPS41-212ENST00000482217 ART5Q96L15 291 aa4.12□□□□□ -1.75
VPS41-212ENST00000482217 RPRD1AQ96P16 312 aaPredicted RBP4.12□□□□□ -1.75
VPS41-212ENST00000482217 OR1F2PQ96R84 312 aa4.12□□□□□ -1.75
VPS41-212ENST00000482217 SMC6Q96SB8 1091 aa4.12□□□□□ -1.75
VPS41-212ENST00000482217 JPH2Q9BR39 696 aaPredicted RBP4.12□□□□□ -1.75
VPS41-212ENST00000482217 MRIQ9BWK5 157 aa4.12□□□□□ -1.75
VPS41-212ENST00000482217 POLR1EQ9GZS1 481 aaKnown RBP4.12□□□□□ -1.75
VPS41-212ENST00000482217 ZNF350Q9GZX5 532 aa4.12□□□□□ -1.75
VPS41-212ENST00000482217 SLC25A32Q9H2D1 315 aa4.12□□□□□ -1.75
VPS41-212ENST00000482217 TFB2MQ9H5Q4 396 aaKnown RBP4.12□□□□□ -1.75
VPS41-212ENST00000482217 BICC1Q9H694 974 aaKnown RBP4.12□□□□□ -1.75
VPS41-212ENST00000482217 PSTPIP2Q9H939 334 aa4.12□□□□□ -1.75
VPS41-212ENST00000482217 LRRC40Q9H9A6 602 aa4.12□□□□□ -1.75
VPS41-212ENST00000482217 GLOD4Q9HC38 313 aa4.12□□□□□ -1.75
VPS41-212ENST00000482217 TRIM36Q9NQ86 728 aa4.12□□□□□ -1.75
VPS41-212ENST00000482217 PTGFRNQ9P2B2 879 aa4.12□□□□□ -1.75
VPS41-212ENST00000482217 VPS51Q9UID3 782 aa4.12□□□□□ -1.75
VPS41-212ENST00000482217 FBXW2Q9UKT8 454 aa4.12□□□□□ -1.75
VPS41-212ENST00000482217 SUFUQ9UMX1 484 aa4.12□□□□□ -1.75
VPS41-212ENST00000482217 GAB2Q9UQC2 676 aa4.12□□□□□ -1.75
VPS41-212ENST00000482217 SNX14Q9Y5W7 946 aa4.12□□□□□ -1.75
VPS41-212ENST00000482217 KIF7Q2M1P5 1343 aa4.12□□□□□ -1.75
VPS41-212ENST00000482217 ADGRA2Q96PE1 1338 aa4.12□□□□□ -1.75
VPS41-212ENST00000482217 C15orf38-AP3S2A0A0A6YYH1 394 aa4.11□□□□□ -1.75
VPS41-212ENST00000482217 OR2W5A6NFC9 320 aa4.11□□□□□ -1.75
VPS41-212ENST00000482217 WIPF3A6NGB9 483 aa4.11□□□□□ -1.75
VPS41-212ENST00000482217 SH2D7A6NKC9 451 aaPredicted RBP4.11□□□□□ -1.75
VPS41-212ENST00000482217 ZAR1LA6NP61 321 aa4.11□□□□□ -1.75
VPS41-212ENST00000482217 TARM1B6A8C7 271 aa4.11□□□□□ -1.75
VPS41-212ENST00000482217 KCNJ18B7U540 433 aa4.11□□□□□ -1.75
VPS41-212ENST00000482217 GCOM1H8Y6P7 765 aaPredicted RBP4.11□□□□□ -1.75
VPS41-212ENST00000482217 SNAP23O00161 211 aa4.11□□□□□ -1.75
VPS41-212ENST00000482217 QSOX1O00391 747 aa4.11□□□□□ -1.75
VPS41-212ENST00000482217 PLK4O00444 970 aa4.11□□□□□ -1.75
VPS41-212ENST00000482217 EIF3DO15371 548 aaKnown RBP eCLIP4.11□□□□□ -1.75
VPS41-212ENST00000482217 YKT6O15498 198 aa4.11□□□□□ -1.75
VPS41-212ENST00000482217 GUCY1B2O75343 617 aa4.11□□□□□ -1.75
VPS41-212ENST00000482217 SEC14L2O76054 403 aa4.11□□□□□ -1.75
VPS41-212ENST00000482217 MFN2O95140 757 aa4.11□□□□□ -1.75
VPS41-212ENST00000482217 NXPH3O95157 252 aa4.11□□□□□ -1.75
VPS41-212ENST00000482217 KLHL2O95198 593 aa4.11□□□□□ -1.75
VPS41-212ENST00000482217 OTCP00480 354 aa4.11□□□□□ -1.75
VPS41-212ENST00000482217 CSTAP01040 98 aa4.11□□□□□ -1.75
VPS41-212ENST00000482217 ADH4P08319 380 aa4.11□□□□□ -1.75
VPS41-212ENST00000482217 FAM86B2P0C5J1 330 aa4.11□□□□□ -1.75
VPS41-212ENST00000482217 EPB41P11171 864 aaKnown RBP4.11□□□□□ -1.75
VPS41-212ENST00000482217 CDK4P11802 303 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms