RNA–Protein interactions for RNA: ENST00000481910.1

HPS4-212, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 1,914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-212ENST00000481910 CALML6Q8TD86 181 aa11.47□□□□□ -0.57
HPS4-212ENST00000481910 ACMSDQ8TDX5 336 aa11.47□□□□□ -0.57
HPS4-212ENST00000481910 BTN2A2Q8WVV5 523 aa11.47□□□□□ -0.57
HPS4-212ENST00000481910 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.47□□□□□ -0.57
HPS4-212ENST00000481910 HIC2Q96JB3 615 aa11.47□□□□□ -0.57
HPS4-212ENST00000481910 SLC6A18Q96N87 628 aa11.47□□□□□ -0.57
HPS4-212ENST00000481910 APOOQ9BUR5 198 aa11.47□□□□□ -0.57
HPS4-212ENST00000481910 WDR26Q9H7D7 661 aa11.47□□□□□ -0.57
HPS4-212ENST00000481910 SLCO1B1Q9Y6L6 691 aa11.47□□□□□ -0.57
HPS4-212ENST00000481910 FANCMQ8IYD8 2048 aa11.47□□□□□ -0.57
HPS4-212ENST00000481910 AGAP14A8MT82 685 aa11.47□□□□□ -0.57
HPS4-212ENST00000481910 PMLP29590 882 aa11.47□□□□□ -0.57
HPS4-212ENST00000481910 CA5AP35218 305 aa11.47□□□□□ -0.57
HPS4-212ENST00000481910 CDK3Q00526 305 aa11.47□□□□□ -0.57
HPS4-212ENST00000481910 TCF15Q12870 199 aa11.47□□□□□ -0.57
HPS4-212ENST00000481910 FRG1Q14331 258 aaKnown RBP11.47□□□□□ -0.57
HPS4-212ENST00000481910 BRD3Q15059 726 aa11.47□□□□□ -0.57
HPS4-212ENST00000481910 LPAL2Q16609 132 aa11.47□□□□□ -0.57
HPS4-212ENST00000481910 UBAP2Q5T6F2 1119 aaKnown RBP11.47□□□□□ -0.57
HPS4-212ENST00000481910 CAPRIN2Q6IMN6 1127 aaKnown RBP11.47□□□□□ -0.57
HPS4-212ENST00000481910 ADAMTSL4Q6UY14 1074 aa11.47□□□□□ -0.57
HPS4-212ENST00000481910 GCNT7Q6ZNI0 430 aa11.47□□□□□ -0.57
HPS4-212ENST00000481910 Q6ZSR6 202 aa11.47□□□□□ -0.57
HPS4-212ENST00000481910 CYS1Q717R9 158 aa11.47□□□□□ -0.57
HPS4-212ENST00000481910 LDB1Q86U70 411 aaPredicted RBP11.47□□□□□ -0.57
HPS4-212ENST00000481910 HEATR4Q86WZ0 1026 aa11.47□□□□□ -0.57
HPS4-212ENST00000481910 PIANPQ8IYJ0 282 aa11.47□□□□□ -0.57
HPS4-212ENST00000481910 SVIPQ8NHG7 77 aa11.47□□□□□ -0.57
HPS4-212ENST00000481910 TRPC4APQ8TEL6 797 aa11.47□□□□□ -0.57
HPS4-212ENST00000481910 FBF1Q8TES7 1133 aa11.47□□□□□ -0.57
HPS4-212ENST00000481910 UBLCP1Q8WVY7 318 aaPredicted RBP11.47□□□□□ -0.57
HPS4-212ENST00000481910 GLYATL1Q969I3 302 aa11.47□□□□□ -0.57
HPS4-212ENST00000481910 VPS35Q96QK1 796 aa11.47□□□□□ -0.57
HPS4-212ENST00000481910 TTC1Q99614 292 aa11.47□□□□□ -0.57
HPS4-212ENST00000481910 FAM167BQ9BTA0 163 aa11.47□□□□□ -0.57
HPS4-212ENST00000481910 LGR4Q9BXB1 951 aa11.47□□□□□ -0.57
HPS4-212ENST00000481910 TEX101Q9BY14 249 aa11.47□□□□□ -0.57
HPS4-212ENST00000481910 PRM3Q9NNZ6 103 aa11.47□□□□□ -0.57
HPS4-212ENST00000481910 PAPOLBQ9NRJ5 636 aaKnown RBP11.47□□□□□ -0.57
HPS4-212ENST00000481910 IARS2Q9NSE4 1012 aaKnown RBP11.47□□□□□ -0.57
HPS4-212ENST00000481910 MARCH4Q9P2E8 410 aaPredicted RBP11.47□□□□□ -0.57
HPS4-212ENST00000481910 TRBV5-4A0A0C4DH59 114 aa11.46□□□□□ -0.58
HPS4-212ENST00000481910 CCDC151A5D8V7 595 aa11.46□□□□□ -0.58
HPS4-212ENST00000481910 A6NNZ2 444 aa11.46□□□□□ -0.58
HPS4-212ENST00000481910 BCAT2O15382 392 aaPredicted RBP11.46□□□□□ -0.58
HPS4-212ENST00000481910 RIPK2O43353 540 aa11.46□□□□□ -0.58
HPS4-212ENST00000481910 PIAS1O75925 651 aa11.46□□□□□ -0.58
HPS4-212ENST00000481910 TEAD1P28347 426 aa11.46□□□□□ -0.58
HPS4-212ENST00000481910 CD38P28907 300 aa11.46□□□□□ -0.58
HPS4-212ENST00000481910 STX2P32856 288 aa11.46□□□□□ -0.58
HPS4-212ENST00000481910 PPARGP37231 505 aaPredicted RBP11.46□□□□□ -0.58
HPS4-212ENST00000481910 PFN3P60673 137 aa11.46□□□□□ -0.58
HPS4-212ENST00000481910 MGAT5Q09328 741 aa11.46□□□□□ -0.58
HPS4-212ENST00000481910 CTBP1Q13363 440 aa11.46□□□□□ -0.58
HPS4-212ENST00000481910 SEMA3AQ14563 771 aa11.46□□□□□ -0.58
HPS4-212ENST00000481910 AARS2Q5JTZ9 985 aaKnown RBP11.46□□□□□ -0.58
HPS4-212ENST00000481910 ZNF470Q6ECI4 717 aa11.46□□□□□ -0.58
HPS4-212ENST00000481910 CERS6Q6ZMG9 384 aa11.46□□□□□ -0.58
HPS4-212ENST00000481910 ABI3BPQ7Z7G0 1075 aa11.46□□□□□ -0.58
HPS4-212ENST00000481910 SERPINA9Q86WD7 417 aa11.46□□□□□ -0.58
HPS4-212ENST00000481910 NXPE1Q8N323 547 aa11.46□□□□□ -0.58
HPS4-212ENST00000481910 PNPLA1Q8N8W4 532 aa11.46□□□□□ -0.58
HPS4-212ENST00000481910 ZBTB8BQ8NAP8 495 aaPredicted RBP11.46□□□□□ -0.58
HPS4-212ENST00000481910 PRSS33Q8NF86 280 aa11.46□□□□□ -0.58
HPS4-212ENST00000481910 GPR150Q8NGU9 434 aa11.46□□□□□ -0.58
HPS4-212ENST00000481910 C1orf216Q8TAB5 229 aa11.46□□□□□ -0.58
HPS4-212ENST00000481910 FAM174AQ8TBP5 190 aa11.46□□□□□ -0.58
HPS4-212ENST00000481910 SUN5Q8TC36 379 aa11.46□□□□□ -0.58
HPS4-212ENST00000481910 CDKL2Q92772 493 aa11.46□□□□□ -0.58
HPS4-212ENST00000481910 CAVIN3Q969G5 261 aa11.46□□□□□ -0.58
HPS4-212ENST00000481910 ULK4Q96C45 1275 aa11.46□□□□□ -0.58
HPS4-212ENST00000481910 KLHDC7BQ96G42 594 aa11.46□□□□□ -0.58
HPS4-212ENST00000481910 TM9SF3Q9HD45 589 aa11.46□□□□□ -0.58
HPS4-212ENST00000481910 ARFGAP3Q9NP61 516 aa11.46□□□□□ -0.58
HPS4-212ENST00000481910 PHPT1Q9NRX4 125 aaPredicted RBP11.46□□□□□ -0.58
HPS4-212ENST00000481910 TMEM74BQ9NUR3 256 aa11.46□□□□□ -0.58
HPS4-212ENST00000481910 SMOXQ9NWM0 555 aa11.46□□□□□ -0.58
HPS4-212ENST00000481910 ZFATQ9P243 1243 aa11.46□□□□□ -0.58
HPS4-212ENST00000481910 TMPRSS11EQ9UL52 423 aa11.46□□□□□ -0.58
HPS4-212ENST00000481910 CNOT6Q9ULM6 557 aaKnown RBP11.46□□□□□ -0.58
HPS4-212ENST00000481910 PLXNB3Q9ULL4 1909 aa11.45□□□□□ -0.58
HPS4-212ENST00000481910 CACNB4O00305 520 aaPredicted RBP11.45□□□□□ -0.58
HPS4-212ENST00000481910 MTX2O75431 263 aa11.45□□□□□ -0.58
HPS4-212ENST00000481910 GNSP15586 552 aa11.45□□□□□ -0.58
HPS4-212ENST00000481910 ACRV1P26436 265 aa11.45□□□□□ -0.58
HPS4-212ENST00000481910 RABIFP47224 123 aa11.45□□□□□ -0.58
HPS4-212ENST00000481910 TTPAP49638 278 aa11.45□□□□□ -0.58
HPS4-212ENST00000481910 THOP1P52888 689 aa11.45□□□□□ -0.58
HPS4-212ENST00000481910 YPEL5P62699 121 aa11.45□□□□□ -0.58
HPS4-212ENST00000481910 PDE1CQ14123 709 aaPredicted RBP11.45□□□□□ -0.58
HPS4-212ENST00000481910 MAP7Q14244 749 aa11.45□□□□□ -0.58
HPS4-212ENST00000481910 SLC29A2Q14542 456 aa11.45□□□□□ -0.58
HPS4-212ENST00000481910 GPRC6AQ5T6X5 926 aa11.45□□□□□ -0.58
HPS4-212ENST00000481910 LYPLAL1Q5VWZ2 237 aa11.45□□□□□ -0.58
HPS4-212ENST00000481910 KYAT3Q6YP21 454 aaKnown RBP11.45□□□□□ -0.58
HPS4-212ENST00000481910 CILP2Q8IUL8 1156 aa11.45□□□□□ -0.58
HPS4-212ENST00000481910 PHYKPLQ8IUZ5 450 aa11.45□□□□□ -0.58
HPS4-212ENST00000481910 DENND6AQ8IWF6 608 aa11.45□□□□□ -0.58
HPS4-212ENST00000481910 MFSD2AQ8NA29 543 aa11.45□□□□□ -0.58
HPS4-212ENST00000481910 OR13H1Q8NG92 308 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms