RNA–Protein interactions for RNA: ENST00000481441.1

RXRB-203, Transcript of retinoid X receptor beta, humanhuman

TSL 2

Gene RXRB, Length 1,330 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-203ENST00000481441 IZUMO3Q5VZ72 239 aa17.01■□□□□ 0.31
RXRB-203ENST00000481441 WASH2PQ6VEQ5 465 aa17.01■□□□□ 0.31
RXRB-203ENST00000481441 CERS6Q6ZMG9 384 aa17.01■□□□□ 0.31
RXRB-203ENST00000481441 LRRTM4Q86VH4 590 aa17.01■□□□□ 0.31
RXRB-203ENST00000481441 ZNF547Q8IVP9 402 aa17.01■□□□□ 0.31
RXRB-203ENST00000481441 CCHCR1Q8TD31 782 aa17.01■□□□□ 0.31
RXRB-203ENST00000481441 SNRNP40Q96DI7 357 aaKnown RBP17.01■□□□□ 0.31
RXRB-203ENST00000481441 ZNF514Q96K75 400 aaPredicted RBP17.01■□□□□ 0.31
RXRB-203ENST00000481441 C5orf34Q96MH7 638 aa17.01■□□□□ 0.31
RXRB-203ENST00000481441 SPATA16Q9BXB7 569 aa17.01■□□□□ 0.31
RXRB-203ENST00000481441 TSPY26PQ9H489 355 aa17.01■□□□□ 0.31
RXRB-203ENST00000481441 PCDH18Q9HCL0 1135 aa17.01■□□□□ 0.31
RXRB-203ENST00000481441 WASH6PQ9NQA3 447 aa17.01■□□□□ 0.31
RXRB-203ENST00000481441 ANO10Q9NW15 660 aa17.01■□□□□ 0.31
RXRB-203ENST00000481441 RBM22Q9NW64 420 aaKnown RBP eCLIP17.01■□□□□ 0.31
RXRB-203ENST00000481441 CSMD1Q96PZ7 3565 aa17.01■□□□□ 0.31
RXRB-203ENST00000481441 CPNE3O75131 537 aaKnown RBP17■□□□□ 0.31
RXRB-203ENST00000481441 TMEM63AO94886 807 aa17■□□□□ 0.31
RXRB-203ENST00000481441 JCHAINP01591 159 aa17■□□□□ 0.31
RXRB-203ENST00000481441 CCDC172P0C7W6 258 aa17■□□□□ 0.31
RXRB-203ENST00000481441 SPTBP11277 2137 aa17■□□□□ 0.31
RXRB-203ENST00000481441 DRG2P55039 364 aaKnown RBP17■□□□□ 0.31
RXRB-203ENST00000481441 GPS2Q13227 327 aa17■□□□□ 0.31
RXRB-203ENST00000481441 TXNRD3NBQ6F5E7 133 aa17■□□□□ 0.31
RXRB-203ENST00000481441 SLC38A9Q8NBW4 561 aa17■□□□□ 0.31
RXRB-203ENST00000481441 GPR26Q8NDV2 337 aa17■□□□□ 0.31
RXRB-203ENST00000481441 MR1Q95460 341 aa17■□□□□ 0.31
RXRB-203ENST00000481441 GLYATL1Q969I3 302 aa17■□□□□ 0.31
RXRB-203ENST00000481441 CXorf40BQ96DE9 158 aa17■□□□□ 0.31
RXRB-203ENST00000481441 ERGIC2Q96RQ1 377 aa17■□□□□ 0.31
RXRB-203ENST00000481441 MLPHQ9BV36 600 aaPredicted RBP17■□□□□ 0.31
RXRB-203ENST00000481441 ASF1BQ9NVP2 202 aa17■□□□□ 0.31
RXRB-203ENST00000481441 AMACRQ9UHK6 382 aa17■□□□□ 0.31
RXRB-203ENST00000481441 DIDO1Q9BTC0 2240 aaKnown RBP17■□□□□ 0.31
RXRB-203ENST00000481441 LGALS16A8MUM7 142 aa16.99■□□□□ 0.31
RXRB-203ENST00000481441 ANKRD66B4E2M5 251 aa16.99■□□□□ 0.31
RXRB-203ENST00000481441 MATN3O15232 486 aa16.99■□□□□ 0.31
RXRB-203ENST00000481441 MFSD11O43934 449 aa16.99■□□□□ 0.31
RXRB-203ENST00000481441 IDSP22304 550 aa16.99■□□□□ 0.31
RXRB-203ENST00000481441 ZNF165P49910 485 aa16.99■□□□□ 0.31
RXRB-203ENST00000481441 GALNT2Q10471 571 aa16.99■□□□□ 0.31
RXRB-203ENST00000481441 ANO6Q4KMQ2 910 aa16.99■□□□□ 0.31
RXRB-203ENST00000481441 ZRANB3Q5FWF4 1079 aa16.99■□□□□ 0.31
RXRB-203ENST00000481441 ALS2CLQ60I27 953 aa16.99■□□□□ 0.31
RXRB-203ENST00000481441 C11orf96Q7Z7L8 435 aa16.99■□□□□ 0.31
RXRB-203ENST00000481441 KMT5CQ86Y97 462 aa16.99■□□□□ 0.31
RXRB-203ENST00000481441 D2HGDHQ8N465 521 aa16.99■□□□□ 0.31
RXRB-203ENST00000481441 GLIS1Q8NBF1 620 aa16.99■□□□□ 0.31
RXRB-203ENST00000481441 TTC13Q8NBP0 860 aa16.99■□□□□ 0.31
RXRB-203ENST00000481441 PHF12Q96QT6 1004 aa16.99■□□□□ 0.31
RXRB-203ENST00000481441 SMAD5Q99717 465 aaKnown RBP16.99■□□□□ 0.31
RXRB-203ENST00000481441 MAP3K3Q99759 626 aa16.99■□□□□ 0.31
RXRB-203ENST00000481441 ZSCAN5AQ9BUG6 496 aa16.99■□□□□ 0.31
RXRB-203ENST00000481441 CHST8Q9H2A9 424 aa16.99■□□□□ 0.31
RXRB-203ENST00000481441 FANCLQ9NW38 375 aa16.99■□□□□ 0.31
RXRB-203ENST00000481441 G3BP2Q9UN86 482 aaKnown RBP16.99■□□□□ 0.31
RXRB-203ENST00000481441 WDR37Q9Y2I8 494 aa16.99■□□□□ 0.31
RXRB-203ENST00000481441 TTLL3Q9Y4R7 772 aa16.99■□□□□ 0.31
RXRB-203ENST00000481441 PCSK5Q92824 1860 aa16.99■□□□□ 0.31
RXRB-203ENST00000481441 ZNF185O15231 689 aa16.98■□□□□ 0.31
RXRB-203ENST00000481441 SCRG1O75711 98 aa16.98■□□□□ 0.31
RXRB-203ENST00000481441 FTLP02792 175 aaPredicted RBP16.98■□□□□ 0.31
RXRB-203ENST00000481441 HLA-DQB2P05538 268 aa16.98■□□□□ 0.31
RXRB-203ENST00000481441 FECHP22830 423 aa16.98■□□□□ 0.31
RXRB-203ENST00000481441 ITGA1P56199 1179 aa16.98■□□□□ 0.31
RXRB-203ENST00000481441 RIPPLY3P57055 190 aa16.98■□□□□ 0.31
RXRB-203ENST00000481441 DCDC1P59894 354 aa16.98■□□□□ 0.31
RXRB-203ENST00000481441 PLEKHN1Q494U1 663 aaPredicted RBP16.98■□□□□ 0.31
RXRB-203ENST00000481441 KHDC1Q4VXA5 237 aaKnown RBP16.98■□□□□ 0.31
RXRB-203ENST00000481441 PDPK2PQ6A1A2 396 aa16.98■□□□□ 0.31
RXRB-203ENST00000481441 LCN10Q6JVE6 187 aa16.98■□□□□ 0.31
RXRB-203ENST00000481441 GAS2L3Q86XJ1 694 aa16.98■□□□□ 0.31
RXRB-203ENST00000481441 IQCKQ8N0W5 287 aa16.98■□□□□ 0.31
RXRB-203ENST00000481441 TRAM1L1Q8N609 369 aa16.98■□□□□ 0.31
RXRB-203ENST00000481441 TEKT4Q8WW24 435 aa16.98■□□□□ 0.31
RXRB-203ENST00000481441 FATE1Q969F0 183 aa16.98■□□□□ 0.31
RXRB-203ENST00000481441 LRFN5Q96NI6 719 aa16.98■□□□□ 0.31
RXRB-203ENST00000481441 RANBP9Q96S59 729 aa16.98■□□□□ 0.31
RXRB-203ENST00000481441 NUP85Q9BW27 656 aa16.98■□□□□ 0.31
RXRB-203ENST00000481441 GPR83Q9NYM4 423 aa16.98■□□□□ 0.31
RXRB-203ENST00000481441 NFKBIL1Q9UBC1 381 aaPredicted RBP16.98■□□□□ 0.31
RXRB-203ENST00000481441 TRIM10Q9UDY6 481 aa16.98■□□□□ 0.31
RXRB-203ENST00000481441 SNX7Q9UNH6 387 aa16.98■□□□□ 0.31
RXRB-203ENST00000481441 SCINQ9Y6U3 715 aa16.98■□□□□ 0.31
RXRB-203ENST00000481441 CROCCQ5TZA2 2017 aa16.98■□□□□ 0.31
RXRB-203ENST00000481441 PIKFYVEQ9Y2I7 2098 aa16.98■□□□□ 0.31
RXRB-203ENST00000481441 SEC16AO15027 2179 aa16.98■□□□□ 0.31
RXRB-203ENST00000481441 FBN2P35556 2912 aa16.98■□□□□ 0.31
RXRB-203ENST00000481441 A6NL46 340 aa16.97■□□□□ 0.31
RXRB-203ENST00000481441 VEGFDO43915 354 aa16.97■□□□□ 0.31
RXRB-203ENST00000481441 MTX2O75431 263 aa16.97■□□□□ 0.31
RXRB-203ENST00000481441 MMP2P08253 660 aa16.97■□□□□ 0.31
RXRB-203ENST00000481441 RAB40ALP0C0E4 278 aa16.97■□□□□ 0.31
RXRB-203ENST00000481441 TUBB4BP68371 445 aa16.97■□□□□ 0.31
RXRB-203ENST00000481441 HSD11B2P80365 405 aa16.97■□□□□ 0.31
RXRB-203ENST00000481441 UBXN1Q04323 297 aa16.97■□□□□ 0.31
RXRB-203ENST00000481441 TUBB2AQ13885 445 aa16.97■□□□□ 0.31
RXRB-203ENST00000481441 FAM69BQ5VUD6 431 aa16.97■□□□□ 0.31
RXRB-203ENST00000481441 TIGD7Q6NT04 549 aaPredicted RBP16.97■□□□□ 0.31
RXRB-203ENST00000481441 MED25Q71SY5 747 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms