RNA–Protein interactions for RNA: ENST00000481409.1

USP39-215, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 447 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-215ENST00000481409 B4GALNT1Q00973 533 aa10.03□□□□□ -0.8
USP39-215ENST00000481409 FGL2Q14314 439 aa10.03□□□□□ -0.8
USP39-215ENST00000481409 INPP5AQ14642 412 aa10.03□□□□□ -0.8
USP39-215ENST00000481409 ACAP2Q15057 778 aa10.03□□□□□ -0.8
USP39-215ENST00000481409 RBM20Q5T481 1227 aaKnown RBP10.03□□□□□ -0.8
USP39-215ENST00000481409 NEK10Q6ZWH5 1172 aa10.03□□□□□ -0.8
USP39-215ENST00000481409 OTOAQ7RTW8 1153 aa10.03□□□□□ -0.8
USP39-215ENST00000481409 ADGRG6Q86SQ4 1221 aa10.03□□□□□ -0.8
USP39-215ENST00000481409 FAM124AQ86V42 546 aa10.03□□□□□ -0.8
USP39-215ENST00000481409 IQCHQ86VS3 1027 aa10.03□□□□□ -0.8
USP39-215ENST00000481409 LONP2Q86WA8 852 aa10.03□□□□□ -0.8
USP39-215ENST00000481409 HEATR4Q86WZ0 1026 aa10.03□□□□□ -0.8
USP39-215ENST00000481409 SLC41A1Q8IVJ1 513 aa10.03□□□□□ -0.8
USP39-215ENST00000481409 TMEM145Q8NBT3 493 aa10.03□□□□□ -0.8
USP39-215ENST00000481409 RHEBL1Q8TAI7 183 aa10.03□□□□□ -0.8
USP39-215ENST00000481409 ERLEC1Q96DZ1 483 aa10.03□□□□□ -0.8
USP39-215ENST00000481409 ATXN7L3BQ96GX2 97 aa10.03□□□□□ -0.8
USP39-215ENST00000481409 CCM2Q9BSQ5 444 aa10.03□□□□□ -0.8
USP39-215ENST00000481409 APOOQ9BUR5 198 aa10.03□□□□□ -0.8
USP39-215ENST00000481409 DERL2Q9GZP9 239 aa10.03□□□□□ -0.8
USP39-215ENST00000481409 VPS11Q9H270 941 aa10.03□□□□□ -0.8
USP39-215ENST00000481409 TMCO1Q9UM00 188 aa10.03□□□□□ -0.8
USP39-215ENST00000481409 PLLPQ9Y342 182 aa10.03□□□□□ -0.8
USP39-215ENST00000481409 TMEM120BA0PK00 339 aa10.02□□□□□ -0.81
USP39-215ENST00000481409 LIN7AO14910 233 aaPredicted RBP10.02□□□□□ -0.81
USP39-215ENST00000481409 KMOO15229 486 aa10.02□□□□□ -0.81
USP39-215ENST00000481409 SLC31A1O15431 190 aa10.02□□□□□ -0.81
USP39-215ENST00000481409 NUAK1O60285 661 aa10.02□□□□□ -0.81
USP39-215ENST00000481409 PCCBP05166 539 aa10.02□□□□□ -0.81
USP39-215ENST00000481409 PRSS56P0CW18 603 aa10.02□□□□□ -0.81
USP39-215ENST00000481409 VCLP18206 1134 aa10.02□□□□□ -0.81
USP39-215ENST00000481409 CD27P26842 260 aa10.02□□□□□ -0.81
USP39-215ENST00000481409 AOAHP28039 575 aa10.02□□□□□ -0.81
USP39-215ENST00000481409 HPDP32754 393 aaPredicted RBP10.02□□□□□ -0.81
USP39-215ENST00000481409 IGFALSP35858 605 aa10.02□□□□□ -0.81
USP39-215ENST00000481409 DPP6P42658 865 aa10.02□□□□□ -0.81
USP39-215ENST00000481409 CLCN7P51798 805 aa10.02□□□□□ -0.81
USP39-215ENST00000481409 PRKAA2P54646 552 aa10.02□□□□□ -0.81
USP39-215ENST00000481409 CDKN2DP55273 166 aa10.02□□□□□ -0.81
USP39-215ENST00000481409 NAA20P61599 178 aa10.02□□□□□ -0.81
USP39-215ENST00000481409 PPP2CBP62714 309 aa10.02□□□□□ -0.81
USP39-215ENST00000481409 PPP2CAP67775 309 aa10.02□□□□□ -0.81
USP39-215ENST00000481409 RPA4Q13156 261 aa10.02□□□□□ -0.81
USP39-215ENST00000481409 GBX1Q14549 363 aa10.02□□□□□ -0.81
USP39-215ENST00000481409 SMAD1Q15797 465 aaKnown RBP10.02□□□□□ -0.81
USP39-215ENST00000481409 ZNF528Q3MIS6 628 aa10.02□□□□□ -0.81
USP39-215ENST00000481409 ABI3BPQ7Z7G0 1075 aa10.02□□□□□ -0.81
USP39-215ENST00000481409 C1orf210Q8IVY1 113 aa10.02□□□□□ -0.81
USP39-215ENST00000481409 CEP97Q8IW35 865 aa10.02□□□□□ -0.81
USP39-215ENST00000481409 TRIM42Q8IWZ5 723 aa10.02□□□□□ -0.81
USP39-215ENST00000481409 C4orf33Q8N1A6 199 aa10.02□□□□□ -0.81
USP39-215ENST00000481409 CD200R1Q8TD46 325 aa10.02□□□□□ -0.81
USP39-215ENST00000481409 DENND1AQ8TEH3 1009 aa10.02□□□□□ -0.81
USP39-215ENST00000481409 ASZ1Q8WWH4 475 aa10.02□□□□□ -0.81
USP39-215ENST00000481409 SREK1Q8WXA9 508 aaKnown RBP10.02□□□□□ -0.81
USP39-215ENST00000481409 SLC39A7Q92504 469 aa10.02□□□□□ -0.81
USP39-215ENST00000481409 SKA1Q96BD8 255 aa10.02□□□□□ -0.81
USP39-215ENST00000481409 CCDC126Q96EE4 140 aa10.02□□□□□ -0.81
USP39-215ENST00000481409 SCARF2Q96GP6 870 aaPredicted RBP10.02□□□□□ -0.81
USP39-215ENST00000481409 NDNQ99608 321 aa10.02□□□□□ -0.81
USP39-215ENST00000481409 GPR21Q99679 349 aa10.02□□□□□ -0.81
USP39-215ENST00000481409 OLFM1Q99784 485 aa10.02□□□□□ -0.81
USP39-215ENST00000481409 MRPL57Q9BQC6 102 aaKnown RBP10.02□□□□□ -0.81
USP39-215ENST00000481409 BOCQ9BWV1 1114 aa10.02□□□□□ -0.81
USP39-215ENST00000481409 GPR174Q9BXC1 333 aa10.02□□□□□ -0.81
USP39-215ENST00000481409 SLC13A1Q9BZW2 595 aa10.02□□□□□ -0.81
USP39-215ENST00000481409 DUSP15Q9H1R2 295 aaPredicted RBP10.02□□□□□ -0.81
USP39-215ENST00000481409 TFB2MQ9H5Q4 396 aaKnown RBP10.02□□□□□ -0.81
USP39-215ENST00000481409 KCNK9Q9NPC2 374 aa10.02□□□□□ -0.81
USP39-215ENST00000481409 PCMTD2Q9NV79 361 aa10.02□□□□□ -0.81
USP39-215ENST00000481409 SLC17A4Q9Y2C5 497 aa10.02□□□□□ -0.81
USP39-215ENST00000481409 MED16Q9Y2X0 877 aa10.02□□□□□ -0.81
USP39-215ENST00000481409 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.02□□□□□ -0.81
USP39-215ENST00000481409 PRR23AA6NEV1 266 aa10.01□□□□□ -0.81
USP39-215ENST00000481409 MGAT4DA6NG13 374 aa10.01□□□□□ -0.81
USP39-215ENST00000481409 SYCE1LA8MT33 242 aa10.01□□□□□ -0.81
USP39-215ENST00000481409 K7ESM1 405 aa10.01□□□□□ -0.81
USP39-215ENST00000481409 INPP4BO15327 924 aa10.01□□□□□ -0.81
USP39-215ENST00000481409 BIRC5O15392 142 aa10.01□□□□□ -0.81
USP39-215ENST00000481409 GPR39O43194 453 aa10.01□□□□□ -0.81
USP39-215ENST00000481409 SNUPNO95149 360 aaKnown RBP10.01□□□□□ -0.81
USP39-215ENST00000481409 TRIM16O95361 564 aa10.01□□□□□ -0.81
USP39-215ENST00000481409 IGHV4-34P06331 123 aa10.01□□□□□ -0.81
USP39-215ENST00000481409 CCDC166P0CW27 439 aa10.01□□□□□ -0.81
USP39-215ENST00000481409 MPC1LP0DKB6 136 aa10.01□□□□□ -0.81
USP39-215ENST00000481409 SAT1P21673 171 aa10.01□□□□□ -0.81
USP39-215ENST00000481409 CLCNKAP51800 687 aa10.01□□□□□ -0.81
USP39-215ENST00000481409 TIAL1Q01085 375 aaKnown RBP eCLIP10.01□□□□□ -0.81
USP39-215ENST00000481409 IL9RQ01113 521 aa10.01□□□□□ -0.81
USP39-215ENST00000481409 DMPKQ09013 629 aa10.01□□□□□ -0.81
USP39-215ENST00000481409 ASPHQ12797 758 aa10.01□□□□□ -0.81
USP39-215ENST00000481409 NFATC4Q14934 902 aa10.01□□□□□ -0.81
USP39-215ENST00000481409 CDKL4Q5MAI5 379 aa10.01□□□□□ -0.81
USP39-215ENST00000481409 WDR45BQ5MNZ6 344 aa10.01□□□□□ -0.81
USP39-215ENST00000481409 TMEM220Q6QAJ8 160 aa10.01□□□□□ -0.81
USP39-215ENST00000481409 CMC1Q7Z7K0 106 aa10.01□□□□□ -0.81
USP39-215ENST00000481409 LRRTM4Q86VH4 590 aa10.01□□□□□ -0.81
USP39-215ENST00000481409 FBXL6Q8N531 539 aa10.01□□□□□ -0.81
USP39-215ENST00000481409 OXR1Q8N573 874 aa10.01□□□□□ -0.81
USP39-215ENST00000481409 ZBTB2Q8N680 514 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms