RNA–Protein interactions for RNA: ENST00000481048.5

LRCH3-216, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 536 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-216ENST00000481048 CCKBRP32239 447 aa6.47□□□□□ -1.37
LRCH3-216ENST00000481048 TRIM23P36406 574 aa6.47□□□□□ -1.37
LRCH3-216ENST00000481048 HCAR3P49019 387 aa6.47□□□□□ -1.37
LRCH3-216ENST00000481048 RENBPP51606 427 aa6.47□□□□□ -1.37
LRCH3-216ENST00000481048 SRP54P61011 504 aaKnown RBP6.47□□□□□ -1.37
LRCH3-216ENST00000481048 C1orf61Q13536 156 aa6.47□□□□□ -1.37
LRCH3-216ENST00000481048 NFATC4Q14934 902 aa6.47□□□□□ -1.37
LRCH3-216ENST00000481048 CYTH1Q15438 398 aa6.47□□□□□ -1.37
LRCH3-216ENST00000481048 CLPPQ16740 277 aaPredicted RBP6.47□□□□□ -1.37
LRCH3-216ENST00000481048 RAB6CQ53S08 254 aa6.47□□□□□ -1.37
LRCH3-216ENST00000481048 TPRG1LQ5T0D9 272 aa6.47□□□□□ -1.37
LRCH3-216ENST00000481048 CFAP58Q5T655 872 aa6.47□□□□□ -1.37
LRCH3-216ENST00000481048 ATXN7L2Q5T6C5 722 aaPredicted RBP6.47□□□□□ -1.37
LRCH3-216ENST00000481048 ERMARDQ5T6L9 678 aa6.47□□□□□ -1.37
LRCH3-216ENST00000481048 MROH9Q5TGP6 573 aa6.47□□□□□ -1.37
LRCH3-216ENST00000481048 GTF2IRD2BQ6EKJ0 949 aa6.47□□□□□ -1.37
LRCH3-216ENST00000481048 ACAD10Q6JQN1 1059 aa6.47□□□□□ -1.37
LRCH3-216ENST00000481048 DNAJC24Q6P3W2 148 aa6.47□□□□□ -1.37
LRCH3-216ENST00000481048 SCYL2Q6P3W7 929 aa6.47□□□□□ -1.37
LRCH3-216ENST00000481048 DCUN1D2Q6PH85 259 aa6.47□□□□□ -1.37
LRCH3-216ENST00000481048 PCSK4Q6UW60 755 aa6.47□□□□□ -1.37
LRCH3-216ENST00000481048 RBM43Q6ZSC3 357 aaKnown RBP6.47□□□□□ -1.37
LRCH3-216ENST00000481048 GTF2IRD2Q86UP8 949 aa6.47□□□□□ -1.37
LRCH3-216ENST00000481048 MCOLN2Q8IZK6 566 aa6.47□□□□□ -1.37
LRCH3-216ENST00000481048 RBFAQ8N0V3 343 aa6.47□□□□□ -1.37
LRCH3-216ENST00000481048 PYROXD2Q8N2H3 581 aa6.47□□□□□ -1.37
LRCH3-216ENST00000481048 GPR156Q8NFN8 814 aa6.47□□□□□ -1.37
LRCH3-216ENST00000481048 CPLX3Q8WVH0 158 aa6.47□□□□□ -1.37
LRCH3-216ENST00000481048 PPP1R14AQ96A00 147 aa6.47□□□□□ -1.37
LRCH3-216ENST00000481048 NAF1Q96HR8 494 aaKnown RBP6.47□□□□□ -1.37
LRCH3-216ENST00000481048 WDR92Q96MX6 357 aa6.47□□□□□ -1.37
LRCH3-216ENST00000481048 GFM1Q96RP9 751 aaKnown RBP6.47□□□□□ -1.37
LRCH3-216ENST00000481048 CCNL2Q96S94 520 aaPredicted RBP6.47□□□□□ -1.37
LRCH3-216ENST00000481048 PCDHB18PQ96TA0 734 aa6.47□□□□□ -1.37
LRCH3-216ENST00000481048 AGPAT1Q99943 283 aa6.47□□□□□ -1.37
LRCH3-216ENST00000481048 CCDC3Q9BQI4 270 aa6.47□□□□□ -1.37
LRCH3-216ENST00000481048 MAGEB5Q9BZ81 275 aa6.47□□□□□ -1.37
LRCH3-216ENST00000481048 CLPBQ9H078 707 aa6.47□□□□□ -1.37
LRCH3-216ENST00000481048 RAB6CQ9H0N0 254 aa6.47□□□□□ -1.37
LRCH3-216ENST00000481048 TCEAL2Q9H3H9 227 aaPredicted RBP6.47□□□□□ -1.37
LRCH3-216ENST00000481048 LRRC19Q9H756 370 aa6.47□□□□□ -1.37
LRCH3-216ENST00000481048 ATP13A3Q9H7F0 1226 aa6.47□□□□□ -1.37
LRCH3-216ENST00000481048 PCDH12Q9NPG4 1184 aa6.47□□□□□ -1.37
LRCH3-216ENST00000481048 MBNL1Q9NR56 388 aaKnown RBP6.47□□□□□ -1.37
LRCH3-216ENST00000481048 TAB2Q9NYJ8 693 aa6.47□□□□□ -1.37
LRCH3-216ENST00000481048 PPP4R1LQ9P1A2 415 aa6.47□□□□□ -1.37
LRCH3-216ENST00000481048 LHX3Q9UBR4 397 aa6.47□□□□□ -1.37
LRCH3-216ENST00000481048 KLQ9UEF7 1012 aa6.47□□□□□ -1.37
LRCH3-216ENST00000481048 LIMA1Q9UHB6 759 aaKnown RBP6.47□□□□□ -1.37
LRCH3-216ENST00000481048 PNMA8BQ9ULN7 279 aaPredicted RBP6.47□□□□□ -1.37
LRCH3-216ENST00000481048 MYO6Q9UM54 1294 aa6.47□□□□□ -1.37
LRCH3-216ENST00000481048 GPR34Q9UPC5 381 aa6.47□□□□□ -1.37
LRCH3-216ENST00000481048 ATP8A1Q9Y2Q0 1164 aa6.47□□□□□ -1.37
LRCH3-216ENST00000481048 KALRNO60229 2985 aa6.47□□□□□ -1.37
LRCH3-216ENST00000481048 DOPEY2Q9Y3R5 2298 aa6.46□□□□□ -1.37
LRCH3-216ENST00000481048 MYO18BQ8IUG5 2567 aa6.46□□□□□ -1.38
LRCH3-216ENST00000481048 A0A1W2PNU3 283 aaPredicted RBP6.46□□□□□ -1.38
LRCH3-216ENST00000481048 C9orf118A6NHY6 69 aa6.46□□□□□ -1.38
LRCH3-216ENST00000481048 LGALS16A8MUM7 142 aa6.46□□□□□ -1.38
LRCH3-216ENST00000481048 J3QKU1 62 aa6.46□□□□□ -1.38
LRCH3-216ENST00000481048 CACNB4O00305 520 aaPredicted RBP6.46□□□□□ -1.38
LRCH3-216ENST00000481048 EPHB6O15197 1021 aa6.46□□□□□ -1.38
LRCH3-216ENST00000481048 CCP110O43303 1012 aa6.46□□□□□ -1.38
LRCH3-216ENST00000481048 NUDT21O43809 227 aaKnown RBP6.46□□□□□ -1.38
LRCH3-216ENST00000481048 PALMO75781 387 aa6.46□□□□□ -1.38
LRCH3-216ENST00000481048 RNF8O76064 485 aa6.46□□□□□ -1.38
LRCH3-216ENST00000481048 TNFSF15O95150 251 aa6.46□□□□□ -1.38
LRCH3-216ENST00000481048 SFTPCP11686 197 aa6.46□□□□□ -1.38
LRCH3-216ENST00000481048 GZMAP12544 262 aa6.46□□□□□ -1.38
LRCH3-216ENST00000481048 ATP1A3P13637 1013 aa6.46□□□□□ -1.38
LRCH3-216ENST00000481048 PLA2G2AP14555 144 aa6.46□□□□□ -1.38
LRCH3-216ENST00000481048 FERP16591 822 aa6.46□□□□□ -1.38
LRCH3-216ENST00000481048 CDK11BP21127 795 aaKnown RBP6.46□□□□□ -1.38
LRCH3-216ENST00000481048 CD82P27701 267 aa6.46□□□□□ -1.38
LRCH3-216ENST00000481048 MMP12P39900 470 aa6.46□□□□□ -1.38
LRCH3-216ENST00000481048 GDF5P43026 501 aa6.46□□□□□ -1.38
LRCH3-216ENST00000481048 KLK7P49862 253 aa6.46□□□□□ -1.38
LRCH3-216ENST00000481048 COPB1P53618 953 aaKnown RBP6.46□□□□□ -1.38
LRCH3-216ENST00000481048 INHBCP55103 352 aa6.46□□□□□ -1.38
LRCH3-216ENST00000481048 KIAA1024LP59773 190 aa6.46□□□□□ -1.38
LRCH3-216ENST00000481048 TPI1P60174 286 aa6.46□□□□□ -1.38
LRCH3-216ENST00000481048 RPL7AP62424 266 aaKnown RBP6.46□□□□□ -1.38
LRCH3-216ENST00000481048 RPL11P62913 178 aaKnown RBP6.46□□□□□ -1.38
LRCH3-216ENST00000481048 UBXN1Q04323 297 aa6.46□□□□□ -1.38
LRCH3-216ENST00000481048 BCL2L1Q07817 233 aa6.46□□□□□ -1.38
LRCH3-216ENST00000481048 IL10RBQ08334 325 aa6.46□□□□□ -1.38
LRCH3-216ENST00000481048 ATMQ13315 3056 aa6.46□□□□□ -1.38
LRCH3-216ENST00000481048 PEX6Q13608 980 aa6.46□□□□□ -1.38
LRCH3-216ENST00000481048 IRF4Q15306 451 aa6.46□□□□□ -1.38
LRCH3-216ENST00000481048 ALG11Q2TAA5 492 aa6.46□□□□□ -1.38
LRCH3-216ENST00000481048 CR1LQ2VPA4 569 aa6.46□□□□□ -1.38
LRCH3-216ENST00000481048 AFMIDQ63HM1 303 aa6.46□□□□□ -1.38
LRCH3-216ENST00000481048 LEKR1Q6ZMV7 388 aa6.46□□□□□ -1.38
LRCH3-216ENST00000481048 RAB11FIP2Q7L804 512 aa6.46□□□□□ -1.38
LRCH3-216ENST00000481048 PHLDB2Q86SQ0 1253 aa6.46□□□□□ -1.38
LRCH3-216ENST00000481048 SRLQ86TD4 932 aa6.46□□□□□ -1.38
LRCH3-216ENST00000481048 FBXO39Q8N4B4 442 aa6.46□□□□□ -1.38
LRCH3-216ENST00000481048 OR56A4Q8NGH8 313 aa6.46□□□□□ -1.38
LRCH3-216ENST00000481048 KIAA1524Q8TCG1 905 aa6.46□□□□□ -1.38
LRCH3-216ENST00000481048 TSACCQ96A04 125 aaPredicted RBP6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms