RNA–Protein interactions for RNA: ENST00000480638.1

CALD1-219, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 560 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-219ENST00000480638 TPRG1Q6ZUI0 275 aa4.92□□□□□ -1.62
CALD1-219ENST00000480638 SLC26A9Q7LBE3 791 aa4.92□□□□□ -1.62
CALD1-219ENST00000480638 ADGRF2Q8IZF7 708 aa4.92□□□□□ -1.62
CALD1-219ENST00000480638 RBM15BQ8NDT2 890 aaKnown RBP4.92□□□□□ -1.62
CALD1-219ENST00000480638 SPATA3Q8NHX4 192 aa4.92□□□□□ -1.62
CALD1-219ENST00000480638 OXNAD1Q96HP4 312 aaPredicted RBP4.92□□□□□ -1.62
CALD1-219ENST00000480638 C1QTNF1Q9BXJ1 281 aa4.92□□□□□ -1.62
CALD1-219ENST00000480638 PAG1Q9NWQ8 432 aa4.92□□□□□ -1.62
CALD1-219ENST00000480638 TRMT1Q9NXH9 659 aaKnown RBP4.92□□□□□ -1.62
CALD1-219ENST00000480638 A0A1W2PR77 199 aa4.91□□□□□ -1.62
CALD1-219ENST00000480638 PDE9AO76083 593 aa4.91□□□□□ -1.62
CALD1-219ENST00000480638 SELLP14151 372 aa4.91□□□□□ -1.62
CALD1-219ENST00000480638 CSF2RAP15509 400 aa4.91□□□□□ -1.62
CALD1-219ENST00000480638 NR1D1P20393 614 aa4.91□□□□□ -1.62
CALD1-219ENST00000480638 ANOS1P23352 680 aa4.91□□□□□ -1.62
CALD1-219ENST00000480638 MLLT10P55197 1068 aa4.91□□□□□ -1.62
CALD1-219ENST00000480638 ACVR2BQ13705 512 aa4.91□□□□□ -1.62
CALD1-219ENST00000480638 EPHX4Q8IUS5 362 aa4.91□□□□□ -1.62
CALD1-219ENST00000480638 CEP97Q8IW35 865 aa4.91□□□□□ -1.62
CALD1-219ENST00000480638 C1orf52Q8N6N3 182 aaKnown RBP4.91□□□□□ -1.62
CALD1-219ENST00000480638 NR4A3Q92570 626 aa4.91□□□□□ -1.62
CALD1-219ENST00000480638 MOAP1Q96BY2 351 aa4.91□□□□□ -1.62
CALD1-219ENST00000480638 TREX2Q9BQ50 279 aaPredicted RBP4.91□□□□□ -1.62
CALD1-219ENST00000480638 RAD21L1Q9H4I0 556 aa4.91□□□□□ -1.62
CALD1-219ENST00000480638 BLOC1S4Q9NUP1 217 aa4.91□□□□□ -1.62
CALD1-219ENST00000480638 RCC2Q9P258 522 aaKnown RBP4.91□□□□□ -1.62
CALD1-219ENST00000480638 NENFQ9UMX5 172 aa4.91□□□□□ -1.62
CALD1-219ENST00000480638 LAS1LQ9Y4W2 734 aaKnown RBP4.91□□□□□ -1.62
CALD1-219ENST00000480638 IGLV5-45A0A087WSX0 123 aa4.9□□□□□ -1.63
CALD1-219ENST00000480638 PTGES3LE9PB15 166 aa4.9□□□□□ -1.63
CALD1-219ENST00000480638 J3QR06 171 aa4.9□□□□□ -1.63
CALD1-219ENST00000480638 VILLO15195 856 aa4.9□□□□□ -1.63
CALD1-219ENST00000480638 ZBTB43O43298 467 aa4.9□□□□□ -1.63
CALD1-219ENST00000480638 DOK2O60496 412 aa4.9□□□□□ -1.63
CALD1-219ENST00000480638 MCCP23508 829 aa4.9□□□□□ -1.63
CALD1-219ENST00000480638 PSMB10P40306 273 aa4.9□□□□□ -1.63
CALD1-219ENST00000480638 CD81P60033 236 aa4.9□□□□□ -1.63
CALD1-219ENST00000480638 IRF3Q14653 427 aa4.9□□□□□ -1.63
CALD1-219ENST00000480638 MEP1AQ16819 746 aa4.9□□□□□ -1.63
CALD1-219ENST00000480638 CCNYL2Q5T2Q4 361 aa4.9□□□□□ -1.63
CALD1-219ENST00000480638 GFI1BQ5VTD9 330 aa4.9□□□□□ -1.63
CALD1-219ENST00000480638 PLXDC2Q6UX71 529 aa4.9□□□□□ -1.63
CALD1-219ENST00000480638 PIWIL4Q7Z3Z4 852 aaKnown RBP4.9□□□□□ -1.63
CALD1-219ENST00000480638 GALNT13Q8IUC8 556 aa4.9□□□□□ -1.63
CALD1-219ENST00000480638 ARID3BQ8IVW6 561 aaPredicted RBP4.9□□□□□ -1.63
CALD1-219ENST00000480638 SCYL3Q8IZE3 742 aa4.9□□□□□ -1.63
CALD1-219ENST00000480638 TMTC2Q8N394 836 aa4.9□□□□□ -1.63
CALD1-219ENST00000480638 GBGT1Q8N5D6 347 aa4.9□□□□□ -1.63
CALD1-219ENST00000480638 SCRN2Q96FV2 425 aa4.9□□□□□ -1.63
CALD1-219ENST00000480638 ABHD8Q96I13 439 aa4.9□□□□□ -1.63
CALD1-219ENST00000480638 ST6GAL2Q96JF0 529 aa4.9□□□□□ -1.63
CALD1-219ENST00000480638 TIGD1Q96MW7 591 aa4.9□□□□□ -1.63
CALD1-219ENST00000480638 PGLYRP2Q96PD5 576 aa4.9□□□□□ -1.63
CALD1-219ENST00000480638 TRPC7Q9HCX4 862 aa4.9□□□□□ -1.63
CALD1-219ENST00000480638 MAP3K20Q9NYL2 800 aaKnown RBP4.9□□□□□ -1.63
CALD1-219ENST00000480638 TSPYL4Q9UJ04 414 aa4.9□□□□□ -1.63
CALD1-219ENST00000480638 A0A0G2JNG1 304 aa4.89□□□□□ -1.63
CALD1-219ENST00000480638 OR2M5A3KFT3 312 aa4.89□□□□□ -1.63
CALD1-219ENST00000480638 PRR23AA6NEV1 266 aa4.89□□□□□ -1.63
CALD1-219ENST00000480638 TMEM189-UBE2V1I3L0A0 370 aa4.89□□□□□ -1.63
CALD1-219ENST00000480638 CTSVO60911 334 aa4.89□□□□□ -1.63
CALD1-219ENST00000480638 BAG4O95429 457 aaKnown RBP4.89□□□□□ -1.63
CALD1-219ENST00000480638 TIMP3P35625 211 aa4.89□□□□□ -1.63
CALD1-219ENST00000480638 AIMP2Q13155 320 aaKnown RBP4.89□□□□□ -1.63
CALD1-219ENST00000480638 DMP1Q13316 513 aaPredicted RBP4.89□□□□□ -1.63
CALD1-219ENST00000480638 UBE2V1Q13404 147 aa4.89□□□□□ -1.63
CALD1-219ENST00000480638 KIR2DS5Q14953 304 aa4.89□□□□□ -1.63
CALD1-219ENST00000480638 ZDHHC20Q5W0Z9 365 aa4.89□□□□□ -1.63
CALD1-219ENST00000480638 ZNF534Q76KX8 674 aa4.89□□□□□ -1.63
CALD1-219ENST00000480638 NEUROD6Q96NK8 337 aa4.89□□□□□ -1.63
CALD1-219ENST00000480638 DDOQ99489 341 aa4.89□□□□□ -1.63
CALD1-219ENST00000480638 BARD1Q99728 777 aaKnown RBP4.89□□□□□ -1.63
CALD1-219ENST00000480638 SMARCAD1Q9H4L7 1026 aa4.89□□□□□ -1.63
CALD1-219ENST00000480638 TFB2MQ9H5Q4 396 aaKnown RBP4.89□□□□□ -1.63
CALD1-219ENST00000480638 SYNCQ9H7C4 482 aa4.89□□□□□ -1.63
CALD1-219ENST00000480638 DNAJC18Q9H819 358 aa4.89□□□□□ -1.63
CALD1-219ENST00000480638 UPF2Q9HAU5 1272 aaKnown RBP4.89□□□□□ -1.63
CALD1-219ENST00000480638 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.89□□□□□ -1.63
CALD1-219ENST00000480638 FSD2A1L4K1 749 aa4.88□□□□□ -1.63
CALD1-219ENST00000480638 AGAP14A8MT82 685 aa4.88□□□□□ -1.63
CALD1-219ENST00000480638 ERVV-2B6SEH9 535 aa4.88□□□□□ -1.63
CALD1-219ENST00000480638 FAM72CH0Y354 149 aa4.88□□□□□ -1.63
CALD1-219ENST00000480638 PLK4O00444 970 aa4.88□□□□□ -1.63
CALD1-219ENST00000480638 PRKNO60260 465 aaPredicted RBP4.88□□□□□ -1.63
CALD1-219ENST00000480638 GH2P01242 217 aa4.88□□□□□ -1.63
CALD1-219ENST00000480638 PAX1P15863 534 aa4.88□□□□□ -1.63
CALD1-219ENST00000480638 TCEA1P23193 301 aaKnown RBP4.88□□□□□ -1.63
CALD1-219ENST00000480638 DCTP40126 519 aa4.88□□□□□ -1.63
CALD1-219ENST00000480638 DRG2P55039 364 aaKnown RBP4.88□□□□□ -1.63
CALD1-219ENST00000480638 LINC01547P58512 204 aaPredicted RBP4.88□□□□□ -1.63
CALD1-219ENST00000480638 FAM72AQ5TYM5 149 aa4.88□□□□□ -1.63
CALD1-219ENST00000480638 FAM72DQ6L9T8 149 aa4.88□□□□□ -1.63
CALD1-219ENST00000480638 PACS1Q6VY07 963 aa4.88□□□□□ -1.63
CALD1-219ENST00000480638 LONP2Q86WA8 852 aa4.88□□□□□ -1.63
CALD1-219ENST00000480638 FAM72BQ86X60 149 aa4.88□□□□□ -1.63
CALD1-219ENST00000480638 KLHDC9Q8NEP7 349 aa4.88□□□□□ -1.63
CALD1-219ENST00000480638 RDM1Q8NG50 284 aa4.88□□□□□ -1.63
CALD1-219ENST00000480638 ZNF354BQ96LW1 612 aa4.88□□□□□ -1.63
CALD1-219ENST00000480638 DACH2Q96NX9 599 aa4.88□□□□□ -1.63
CALD1-219ENST00000480638 HGH1Q9BTY7 390 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms