RNA–Protein interactions for RNA: ENST00000480495.1

TDP2-205, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

TSL 1 (best)

Gene TDP2, Length 714 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-205ENST00000480495 PRAMEF10O60809 474 aa14.78□□□□□ -0.04
TDP2-205ENST00000480495 VIPP01282 170 aa14.78□□□□□ -0.04
TDP2-205ENST00000480495 LIPCP11150 499 aa14.78□□□□□ -0.04
TDP2-205ENST00000480495 VAC14Q08AM6 782 aa14.78□□□□□ -0.04
TDP2-205ENST00000480495 GPRC6AQ5T6X5 926 aa14.78□□□□□ -0.04
TDP2-205ENST00000480495 ABRAXAS1Q6UWZ7 409 aa14.78□□□□□ -0.04
TDP2-205ENST00000480495 C11orf96Q7Z7L8 435 aa14.78□□□□□ -0.04
TDP2-205ENST00000480495 AMZ2Q86W34 360 aa14.78□□□□□ -0.04
TDP2-205ENST00000480495 TRIM48Q8IWZ4 208 aa14.78□□□□□ -0.04
TDP2-205ENST00000480495 RBM12BQ8IXT5 1001 aaKnown RBP14.78□□□□□ -0.04
TDP2-205ENST00000480495 FAM71DQ8N9W8 422 aa14.78□□□□□ -0.04
TDP2-205ENST00000480495 SLC35B2Q8TB61 432 aa14.78□□□□□ -0.04
TDP2-205ENST00000480495 SNRNP27Q8WVK2 155 aaKnown RBP14.78□□□□□ -0.04
TDP2-205ENST00000480495 NCSTNQ92542 709 aa14.78□□□□□ -0.04
TDP2-205ENST00000480495 ZNF514Q96K75 400 aaPredicted RBP14.78□□□□□ -0.04
TDP2-205ENST00000480495 TAAR9Q96RI9 348 aa14.78□□□□□ -0.04
TDP2-205ENST00000480495 APOL2Q9BQE5 337 aa14.78□□□□□ -0.04
TDP2-205ENST00000480495 FRMD8P1Q9BZ68 369 aaPredicted RBP14.78□□□□□ -0.04
TDP2-205ENST00000480495 CPNE5Q9HCH3 593 aa14.78□□□□□ -0.04
TDP2-205ENST00000480495 TMEM9Q9P0T7 183 aa14.78□□□□□ -0.04
TDP2-205ENST00000480495 SCHIP1Q9P0W5 487 aaPredicted RBP14.78□□□□□ -0.04
TDP2-205ENST00000480495 GUCA1BQ9UMX6 200 aa14.78□□□□□ -0.04
TDP2-205ENST00000480495 ZFC3H1O60293 1989 aaKnown RBP14.78□□□□□ -0.04
TDP2-205ENST00000480495 SCN8AQ9UQD0 1980 aa14.78□□□□□ -0.04
TDP2-205ENST00000480495 IGSF10Q6WRI0 2623 aa14.78□□□□□ -0.04
TDP2-205ENST00000480495 C9orf172C9J069 976 aa14.77□□□□□ -0.05
TDP2-205ENST00000480495 AGRPO00253 132 aa14.77□□□□□ -0.05
TDP2-205ENST00000480495 PSMD3O43242 534 aa14.77□□□□□ -0.05
TDP2-205ENST00000480495 PRAMEF1O95521 474 aa14.77□□□□□ -0.05
TDP2-205ENST00000480495 CCL4P13236 92 aa14.77□□□□□ -0.05
TDP2-205ENST00000480495 AKT1P31749 480 aa14.77□□□□□ -0.05
TDP2-205ENST00000480495 HADHAP40939 763 aa14.77□□□□□ -0.05
TDP2-205ENST00000480495 SLC19A1P41440 591 aa14.77□□□□□ -0.05
TDP2-205ENST00000480495 DMPKQ09013 629 aa14.77□□□□□ -0.05
TDP2-205ENST00000480495 MSLNQ13421 630 aaPredicted RBP14.77□□□□□ -0.05
TDP2-205ENST00000480495 OLIG2Q13516 323 aa14.77□□□□□ -0.05
TDP2-205ENST00000480495 PTPRCAPQ14761 206 aa14.77□□□□□ -0.05
TDP2-205ENST00000480495 LONRF2Q1L5Z9 754 aa14.77□□□□□ -0.05
TDP2-205ENST00000480495 P3H1Q32P28 736 aa14.77□□□□□ -0.05
TDP2-205ENST00000480495 SEL1L2Q5TEA6 688 aa14.77□□□□□ -0.05
TDP2-205ENST00000480495 KCTD11Q693B1 232 aa14.77□□□□□ -0.05
TDP2-205ENST00000480495 DENND5AQ6IQ26 1287 aa14.77□□□□□ -0.05
TDP2-205ENST00000480495 TMEM26Q6ZUK4 368 aa14.77□□□□□ -0.05
TDP2-205ENST00000480495 RASGEF1AQ8N9B8 481 aa14.77□□□□□ -0.05
TDP2-205ENST00000480495 LSM14AQ8ND56 463 aaKnown RBP14.77□□□□□ -0.05
TDP2-205ENST00000480495 CCNL2Q96S94 520 aaPredicted RBP14.77□□□□□ -0.05
TDP2-205ENST00000480495 LRRC40Q9H9A6 602 aa14.77□□□□□ -0.05
TDP2-205ENST00000480495 POT1Q9NUX5 634 aa14.77□□□□□ -0.05
TDP2-205ENST00000480495 ZNF624Q9P2J8 865 aaPredicted RBP14.77□□□□□ -0.05
TDP2-205ENST00000480495 R3HDM2Q9Y2K5 976 aaKnown RBP14.77□□□□□ -0.05
TDP2-205ENST00000480495 PCDHGA3Q9Y5H0 932 aa14.77□□□□□ -0.05
TDP2-205ENST00000480495 TCRBV7S2A1N4TA0A589 114 aa14.76□□□□□ -0.05
TDP2-205ENST00000480495 KLHL33A6NCF5 533 aa14.76□□□□□ -0.05
TDP2-205ENST00000480495 EIF4E1BA6NMX2 242 aaKnown RBP14.76□□□□□ -0.05
TDP2-205ENST00000480495 B4E171 279 aa14.76□□□□□ -0.05
TDP2-205ENST00000480495 IQCJ-SCHIP1C9J366 451 aaPredicted RBP14.76□□□□□ -0.05
TDP2-205ENST00000480495 K7ENP7 123 aa14.76□□□□□ -0.05
TDP2-205ENST00000480495 TK2O00142 265 aa14.76□□□□□ -0.05
TDP2-205ENST00000480495 ATXN7O15265 892 aaPredicted RBP14.76□□□□□ -0.05
TDP2-205ENST00000480495 GPR39O43194 453 aa14.76□□□□□ -0.05
TDP2-205ENST00000480495 POP7O75817 140 aaKnown RBP14.76□□□□□ -0.05
TDP2-205ENST00000480495 SRP72O76094 671 aaKnown RBP14.76□□□□□ -0.05
TDP2-205ENST00000480495 FGF3P11487 239 aaPredicted RBP14.76□□□□□ -0.05
TDP2-205ENST00000480495 BRAFP15056 766 aa14.76□□□□□ -0.05
TDP2-205ENST00000480495 MSH3P20585 1137 aa14.76□□□□□ -0.05
TDP2-205ENST00000480495 MPSTP25325 297 aa14.76□□□□□ -0.05
TDP2-205ENST00000480495 RPL10P27635 214 aaKnown RBP14.76□□□□□ -0.05
TDP2-205ENST00000480495 STIP1P31948 543 aaKnown RBP14.76□□□□□ -0.05
TDP2-205ENST00000480495 TSPAN7P41732 249 aa14.76□□□□□ -0.05
TDP2-205ENST00000480495 HALP42357 657 aa14.76□□□□□ -0.05
TDP2-205ENST00000480495 MAPK9P45984 424 aa14.76□□□□□ -0.05
TDP2-205ENST00000480495 CTSCP53634 463 aa14.76□□□□□ -0.05
TDP2-205ENST00000480495 RHDQ02161 417 aa14.76□□□□□ -0.05
TDP2-205ENST00000480495 SEPT7Q16181 437 aaKnown RBP14.76□□□□□ -0.05
TDP2-205ENST00000480495 ARHGAP40Q5TG30 622 aa14.76□□□□□ -0.05
TDP2-205ENST00000480495 INO80CQ6PI98 192 aaPredicted RBP14.76□□□□□ -0.05
TDP2-205ENST00000480495 TMEM220Q6QAJ8 160 aa14.76□□□□□ -0.05
TDP2-205ENST00000480495 CCDC81Q6ZN84 652 aa14.76□□□□□ -0.05
TDP2-205ENST00000480495 ARHGAP22Q7Z5H3 698 aa14.76□□□□□ -0.05
TDP2-205ENST00000480495 PLXDC1Q8IUK5 500 aa14.76□□□□□ -0.05
TDP2-205ENST00000480495 CXorf40BQ96DE9 158 aa14.76□□□□□ -0.05
TDP2-205ENST00000480495 RTP4Q96DX8 246 aa14.76□□□□□ -0.05
TDP2-205ENST00000480495 BBC3Q96PG8 261 aaPredicted RBP14.76□□□□□ -0.05
TDP2-205ENST00000480495 TMEM121Q9BTD3 319 aa14.76□□□□□ -0.05
TDP2-205ENST00000480495 DDA1Q9BW61 102 aa14.76□□□□□ -0.05
TDP2-205ENST00000480495 TBC1D10AQ9BXI6 508 aa14.76□□□□□ -0.05
TDP2-205ENST00000480495 ASB8Q9H765 288 aa14.76□□□□□ -0.05
TDP2-205ENST00000480495 FOXJ2Q9P0K8 574 aa14.76□□□□□ -0.05
TDP2-205ENST00000480495 FKBPLQ9UIM3 349 aa14.76□□□□□ -0.05
TDP2-205ENST00000480495 KCTD3Q9Y597 815 aa14.76□□□□□ -0.05
TDP2-205ENST00000480495 PCDHB11Q9Y5F2 797 aa14.76□□□□□ -0.05
TDP2-205ENST00000480495 BPTFQ12830 3046 aa14.75□□□□□ -0.05
TDP2-205ENST00000480495 AGAP14A8MT82 685 aa14.75□□□□□ -0.05
TDP2-205ENST00000480495 METTL18O95568 372 aa14.75□□□□□ -0.05
TDP2-205ENST00000480495 RALBP11234 206 aa14.75□□□□□ -0.05
TDP2-205ENST00000480495 CA5AP35218 305 aa14.75□□□□□ -0.05
TDP2-205ENST00000480495 ZNF140P52738 457 aaPredicted RBP14.75□□□□□ -0.05
TDP2-205ENST00000480495 GDF10P55107 478 aa14.75□□□□□ -0.05
TDP2-205ENST00000480495 RAB15P59190 212 aa14.75□□□□□ -0.05
TDP2-205ENST00000480495 XIAPP98170 497 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms