RNA–Protein interactions for RNA: ENST00000480104.5

USP11-208, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 697 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-208ENST00000480104 KREMEN1Q96MU8 473 aa11.59□□□□□ -0.55
USP11-208ENST00000480104 TLR10Q9BXR5 811 aa11.59□□□□□ -0.55
USP11-208ENST00000480104 MAGEB5Q9BZ81 275 aa11.59□□□□□ -0.55
USP11-208ENST00000480104 ABCG8Q9H221 673 aa11.59□□□□□ -0.55
USP11-208ENST00000480104 RETREG1Q9H6L5 497 aa11.59□□□□□ -0.55
USP11-208ENST00000480104 PDFQ9HBH1 243 aa11.59□□□□□ -0.55
USP11-208ENST00000480104 SLC40A1Q9NP59 571 aa11.59□□□□□ -0.55
USP11-208ENST00000480104 POT1Q9NUX5 634 aa11.59□□□□□ -0.55
USP11-208ENST00000480104 CNTN6Q9UQ52 1028 aa11.59□□□□□ -0.55
USP11-208ENST00000480104 OR52A4PA6NMU1 304 aa11.58□□□□□ -0.56
USP11-208ENST00000480104 PSMD11O00231 422 aa11.58□□□□□ -0.56
USP11-208ENST00000480104 UMODP07911 640 aa11.58□□□□□ -0.56
USP11-208ENST00000480104 CYP2A7P20853 494 aa11.58□□□□□ -0.56
USP11-208ENST00000480104 UGT1A4P22310 534 aa11.58□□□□□ -0.56
USP11-208ENST00000480104 GNA15P30679 374 aa11.58□□□□□ -0.56
USP11-208ENST00000480104 CSNK1DP48730 415 aa11.58□□□□□ -0.56
USP11-208ENST00000480104 MFAP5Q13361 173 aa11.58□□□□□ -0.56
USP11-208ENST00000480104 STK38Q15208 465 aa11.58□□□□□ -0.56
USP11-208ENST00000480104 SEPT7Q16181 437 aaKnown RBP11.58□□□□□ -0.56
USP11-208ENST00000480104 ZNF789Q5FWF6 425 aa11.58□□□□□ -0.56
USP11-208ENST00000480104 ZNF385CQ66K41 422 aaPredicted RBP11.58□□□□□ -0.56
USP11-208ENST00000480104 ISLR2Q6UXK2 745 aa11.58□□□□□ -0.56
USP11-208ENST00000480104 C1orf131Q8NDD1 294 aaKnown RBP11.58□□□□□ -0.56
USP11-208ENST00000480104 ACRBPQ8NEB7 543 aa11.58□□□□□ -0.56
USP11-208ENST00000480104 OR2Y1Q8NGV0 311 aa11.58□□□□□ -0.56
USP11-208ENST00000480104 SLC35C1Q96A29 364 aa11.58□□□□□ -0.56
USP11-208ENST00000480104 DPH2Q9BQC3 489 aaPredicted RBP11.58□□□□□ -0.56
USP11-208ENST00000480104 POLDIP3Q9BY77 421 aaKnown RBP11.58□□□□□ -0.56
USP11-208ENST00000480104 GTPBP4Q9BZE4 634 aaKnown RBP11.58□□□□□ -0.56
USP11-208ENST00000480104 SYNCQ9H7C4 482 aa11.58□□□□□ -0.56
USP11-208ENST00000480104 C1GALT1Q9NS00 363 aa11.58□□□□□ -0.56
USP11-208ENST00000480104 KLC4Q9NSK0 619 aa11.58□□□□□ -0.56
USP11-208ENST00000480104 SOHLH2Q9NX45 425 aa11.58□□□□□ -0.56
USP11-208ENST00000480104 ZNF835Q9Y2P0 537 aa11.58□□□□□ -0.56
USP11-208ENST00000480104 GTF3C1Q12789 2109 aa11.57□□□□□ -0.56
USP11-208ENST00000480104 TRAV17A0A0B4J275 112 aa11.57□□□□□ -0.56
USP11-208ENST00000480104 UBA6A0AVT1 1052 aaPredicted RBP11.57□□□□□ -0.56
USP11-208ENST00000480104 PDZK1P1A8MUH7 402 aa11.57□□□□□ -0.56
USP11-208ENST00000480104 J3KR12 359 aa11.57□□□□□ -0.56
USP11-208ENST00000480104 HAX1O00165 279 aa11.57□□□□□ -0.56
USP11-208ENST00000480104 HTRA2O43464 458 aaPredicted RBP11.57□□□□□ -0.56
USP11-208ENST00000480104 PRAMEF2O60811 474 aa11.57□□□□□ -0.56
USP11-208ENST00000480104 CNOT3O75175 753 aaKnown RBP11.57□□□□□ -0.56
USP11-208ENST00000480104 CTAG2O75638 210 aa11.57□□□□□ -0.56
USP11-208ENST00000480104 ZNF202O95125 648 aa11.57□□□□□ -0.56
USP11-208ENST00000480104 F12P00748 615 aaPredicted RBP11.57□□□□□ -0.56
USP11-208ENST00000480104 CRYABP02511 175 aaKnown RBP11.57□□□□□ -0.56
USP11-208ENST00000480104 UNGP13051 313 aaPredicted RBP11.57□□□□□ -0.56
USP11-208ENST00000480104 HOXC12P31275 282 aa11.57□□□□□ -0.56
USP11-208ENST00000480104 FLT3P36888 993 aa11.57□□□□□ -0.56
USP11-208ENST00000480104 ARG2P78540 354 aa11.57□□□□□ -0.56
USP11-208ENST00000480104 GCNT1Q02742 428 aa11.57□□□□□ -0.56
USP11-208ENST00000480104 TFF3Q07654 80 aa11.57□□□□□ -0.56
USP11-208ENST00000480104 RAB6CQ53S08 254 aa11.57□□□□□ -0.56
USP11-208ENST00000480104 TMTC4Q5T4D3 741 aa11.57□□□□□ -0.56
USP11-208ENST00000480104 TRNP1Q6NT89 227 aa11.57□□□□□ -0.56
USP11-208ENST00000480104 Q6ZPB1 254 aaPredicted RBP11.57□□□□□ -0.56
USP11-208ENST00000480104 B4GALNT4Q76KP1 1039 aa11.57□□□□□ -0.56
USP11-208ENST00000480104 BNIPLQ7Z465 357 aa11.57□□□□□ -0.56
USP11-208ENST00000480104 KRTAP1-3Q8IUG1 177 aa11.57□□□□□ -0.56
USP11-208ENST00000480104 AOPEPQ8N6M6 819 aa11.57□□□□□ -0.56
USP11-208ENST00000480104 RTL3Q8N8U3 475 aaKnown RBP11.57□□□□□ -0.56
USP11-208ENST00000480104 LINC00301Q8NCQ3 95 aa11.57□□□□□ -0.56
USP11-208ENST00000480104 OR1L3Q8NH93 324 aa11.57□□□□□ -0.56
USP11-208ENST00000480104 COX4I2Q96KJ9 171 aa11.57□□□□□ -0.56
USP11-208ENST00000480104 CD180Q99467 661 aa11.57□□□□□ -0.56
USP11-208ENST00000480104 LHPPQ9H008 270 aa11.57□□□□□ -0.56
USP11-208ENST00000480104 RAB6CQ9H0N0 254 aa11.57□□□□□ -0.56
USP11-208ENST00000480104 FANCEQ9HB96 536 aa11.57□□□□□ -0.56
USP11-208ENST00000480104 LRFN1Q9P244 771 aa11.57□□□□□ -0.56
USP11-208ENST00000480104 CCDC66A2RUB6 948 aa11.56□□□□□ -0.56
USP11-208ENST00000480104 NKX2-6A6NCS4 301 aa11.56□□□□□ -0.56
USP11-208ENST00000480104 TMEM150CB9EJG8 249 aa11.56□□□□□ -0.56
USP11-208ENST00000480104 CETN3O15182 167 aa11.56□□□□□ -0.56
USP11-208ENST00000480104 KLHL18O94889 574 aa11.56□□□□□ -0.56
USP11-208ENST00000480104 ZBTB11O95625 1053 aaPredicted RBP11.56□□□□□ -0.56
USP11-208ENST00000480104 CPP00450 1065 aa11.56□□□□□ -0.56
USP11-208ENST00000480104 BRAFP15056 766 aa11.56□□□□□ -0.56
USP11-208ENST00000480104 AGXTP21549 392 aa11.56□□□□□ -0.56
USP11-208ENST00000480104 MSX1P28360 303 aa11.56□□□□□ -0.56
USP11-208ENST00000480104 TNFSF10P50591 281 aa11.56□□□□□ -0.56
USP11-208ENST00000480104 CLCNKAP51800 687 aa11.56□□□□□ -0.56
USP11-208ENST00000480104 PARP15Q460N3 678 aa11.56□□□□□ -0.56
USP11-208ENST00000480104 FBXO38Q6PIJ6 1188 aa11.56□□□□□ -0.56
USP11-208ENST00000480104 C3P1Q6ZMU1 363 aa11.56□□□□□ -0.56
USP11-208ENST00000480104 TRIM72Q6ZMU5 477 aa11.56□□□□□ -0.56
USP11-208ENST00000480104 CAMKMTQ7Z624 323 aa11.56□□□□□ -0.56
USP11-208ENST00000480104 SPPL2CQ8IUH8 684 aa11.56□□□□□ -0.56
USP11-208ENST00000480104 RBM12BQ8IXT5 1001 aaKnown RBP11.56□□□□□ -0.56
USP11-208ENST00000480104 CEP57L1Q8IYX8 460 aa11.56□□□□□ -0.56
USP11-208ENST00000480104 ANKRD20A12PQ8NF67 263 aa11.56□□□□□ -0.56
USP11-208ENST00000480104 EXD1Q8NHP7 514 aa11.56□□□□□ -0.56
USP11-208ENST00000480104 LMO3Q8TAP4 145 aa11.56□□□□□ -0.56
USP11-208ENST00000480104 PHF10Q8WUB8 498 aaKnown RBP11.56□□□□□ -0.56
USP11-208ENST00000480104 CPLX3Q8WVH0 158 aa11.56□□□□□ -0.56
USP11-208ENST00000480104 SPOCK2Q92563 424 aa11.56□□□□□ -0.56
USP11-208ENST00000480104 CXorf40BQ96DE9 158 aa11.56□□□□□ -0.56
USP11-208ENST00000480104 PAGE5Q96GU1 130 aa11.56□□□□□ -0.56
USP11-208ENST00000480104 CFAP57Q96MR6 1250 aa11.56□□□□□ -0.56
USP11-208ENST00000480104 SLC7A5P2Q9GIP4 190 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms