RNA–Protein interactions for RNA: ENST00000479199.1

GCA-208, Transcript of grancalcin, humanhuman

TSL 2

Gene GCA, Length 597 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCA-208ENST00000479199 NR1I3Q14994 352 aa11.78□□□□□ -0.52
GCA-208ENST00000479199 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.78□□□□□ -0.52
GCA-208ENST00000479199 ZFYVE27Q5T4F4 411 aa11.78□□□□□ -0.52
GCA-208ENST00000479199 PDPK2PQ6A1A2 396 aa11.78□□□□□ -0.52
GCA-208ENST00000479199 PWWP2BQ6NUJ5 590 aa11.78□□□□□ -0.52
GCA-208ENST00000479199 ALKBH5Q6P6C2 394 aaKnown RBP11.78□□□□□ -0.52
GCA-208ENST00000479199 ABRAXAS1Q6UWZ7 409 aa11.78□□□□□ -0.52
GCA-208ENST00000479199 CERS6Q6ZMG9 384 aa11.78□□□□□ -0.52
GCA-208ENST00000479199 TMC3Q7Z5M5 1100 aa11.78□□□□□ -0.52
GCA-208ENST00000479199 C11orf96Q7Z7L8 435 aa11.78□□□□□ -0.52
GCA-208ENST00000479199 TRAPPC5Q8IUR0 188 aa11.78□□□□□ -0.52
GCA-208ENST00000479199 KLHL6Q8WZ60 621 aa11.78□□□□□ -0.52
GCA-208ENST00000479199 RAPGEF5Q92565 580 aa11.78□□□□□ -0.52
GCA-208ENST00000479199 IMP4Q96G21 291 aaKnown RBP11.78□□□□□ -0.52
GCA-208ENST00000479199 AGAP3Q96P47 875 aa11.78□□□□□ -0.52
GCA-208ENST00000479199 GPR63Q9BZJ6 419 aa11.78□□□□□ -0.52
GCA-208ENST00000479199 LHX9Q9NQ69 397 aa11.78□□□□□ -0.52
GCA-208ENST00000479199 NENFQ9UMX5 172 aa11.78□□□□□ -0.52
GCA-208ENST00000479199 PCDHGA6Q9Y5G7 932 aa11.78□□□□□ -0.52
GCA-208ENST00000479199 HEY1Q9Y5J3 304 aa11.78□□□□□ -0.52
GCA-208ENST00000479199 SPO11Q9Y5K1 396 aa11.78□□□□□ -0.52
GCA-208ENST00000479199 BZW2Q9Y6E2 419 aaKnown RBP11.78□□□□□ -0.52
GCA-208ENST00000479199 PCSK5Q92824 1860 aa11.77□□□□□ -0.53
GCA-208ENST00000479199 MYO9AB2RTY4 2548 aa11.77□□□□□ -0.53
GCA-208ENST00000479199 IGHV5-51A0A0C4DH38 117 aa11.77□□□□□ -0.53
GCA-208ENST00000479199 A0A1W2PQJ5 194 aa11.77□□□□□ -0.53
GCA-208ENST00000479199 LRRD1A4D1F6 860 aa11.77□□□□□ -0.53
GCA-208ENST00000479199 GPR39O43194 453 aa11.77□□□□□ -0.53
GCA-208ENST00000479199 CDK14O94921 469 aa11.77□□□□□ -0.53
GCA-208ENST00000479199 MBD3O95983 291 aa11.77□□□□□ -0.53
GCA-208ENST00000479199 EBLN1P0CF75 366 aa11.77□□□□□ -0.53
GCA-208ENST00000479199 FOLR1P15328 257 aa11.77□□□□□ -0.53
GCA-208ENST00000479199 NELFEP18615 380 aaKnown RBP11.77□□□□□ -0.53
GCA-208ENST00000479199 IDSP22304 550 aa11.77□□□□□ -0.53
GCA-208ENST00000479199 GNLYP22749 145 aa11.77□□□□□ -0.53
GCA-208ENST00000479199 AP1B1Q10567 949 aa11.77□□□□□ -0.53
GCA-208ENST00000479199 SEMA5AQ13591 1074 aa11.77□□□□□ -0.53
GCA-208ENST00000479199 IL10RAQ13651 578 aa11.77□□□□□ -0.53
GCA-208ENST00000479199 AGAP9Q5VTM2 703 aa11.77□□□□□ -0.53
GCA-208ENST00000479199 NPNTQ6UXI9 565 aa11.77□□□□□ -0.53
GCA-208ENST00000479199 B4GALNT4Q76KP1 1039 aa11.77□□□□□ -0.53
GCA-208ENST00000479199 MAP7D3Q8IWC1 876 aa11.77□□□□□ -0.53
GCA-208ENST00000479199 SPATA22Q8NHS9 363 aa11.77□□□□□ -0.53
GCA-208ENST00000479199 CPLX3Q8WVH0 158 aa11.77□□□□□ -0.53
GCA-208ENST00000479199 SYN2Q92777 582 aaPredicted RBP11.77□□□□□ -0.53
GCA-208ENST00000479199 ZDHHC12Q96GR4 267 aa11.77□□□□□ -0.53
GCA-208ENST00000479199 RNF157Q96PX1 679 aa11.77□□□□□ -0.53
GCA-208ENST00000479199 PACSIN1Q9BY11 444 aa11.77□□□□□ -0.53
GCA-208ENST00000479199 AKIRIN1Q9H9L7 192 aaPredicted RBP11.77□□□□□ -0.53
GCA-208ENST00000479199 MAGEE1Q9HCI5 957 aa11.77□□□□□ -0.53
GCA-208ENST00000479199 LRRC4CQ9HCJ2 640 aa11.77□□□□□ -0.53
GCA-208ENST00000479199 BPIFA1Q9NP55 256 aa11.77□□□□□ -0.53
GCA-208ENST00000479199 RAD18Q9NS91 495 aa11.77□□□□□ -0.53
GCA-208ENST00000479199 CTTNBP2NLQ9P2B4 639 aa11.77□□□□□ -0.53
GCA-208ENST00000479199 RARRES3Q9UL19 164 aa11.77□□□□□ -0.53
GCA-208ENST00000479199 PADI1Q9ULC6 663 aa11.77□□□□□ -0.53
GCA-208ENST00000479199 NUP210LQ5VU65 1888 aa11.76□□□□□ -0.53
GCA-208ENST00000479199 PRRC2CQ9Y520 2896 aaKnown RBP11.76□□□□□ -0.53
GCA-208ENST00000479199 C21orf140B9A014 251 aa11.76□□□□□ -0.53
GCA-208ENST00000479199 GOLGA6L22H0YM25 854 aa11.76□□□□□ -0.53
GCA-208ENST00000479199 VEGFDO43915 354 aa11.76□□□□□ -0.53
GCA-208ENST00000479199 AGFG2O95081 481 aa11.76□□□□□ -0.53
GCA-208ENST00000479199 MT-CYBP00156 380 aaPredicted RBP11.76□□□□□ -0.53
GCA-208ENST00000479199 MT-ND3P03897 115 aa11.76□□□□□ -0.53
GCA-208ENST00000479199 RNF224P0DH78 156 aa11.76□□□□□ -0.53
GCA-208ENST00000479199 KDELR1P24390 212 aa11.76□□□□□ -0.53
GCA-208ENST00000479199 PBX1P40424 430 aa11.76□□□□□ -0.53
GCA-208ENST00000479199 CDK18Q07002 472 aa11.76□□□□□ -0.53
GCA-208ENST00000479199 GTF2H3Q13889 308 aa11.76□□□□□ -0.53
GCA-208ENST00000479199 NOMO1Q15155 1222 aa11.76□□□□□ -0.53
GCA-208ENST00000479199 NADK2Q4G0N4 442 aa11.76□□□□□ -0.53
GCA-208ENST00000479199 ATP13A5Q4VNC0 1218 aa11.76□□□□□ -0.53
GCA-208ENST00000479199 C4orf17Q53FE4 359 aa11.76□□□□□ -0.53
GCA-208ENST00000479199 CAPRIN2Q6IMN6 1127 aaKnown RBP11.76□□□□□ -0.53
GCA-208ENST00000479199 FAM199XQ6PEV8 388 aaPredicted RBP11.76□□□□□ -0.53
GCA-208ENST00000479199 WASH2PQ6VEQ5 465 aa11.76□□□□□ -0.53
GCA-208ENST00000479199 NT5DC3Q86UY8 548 aa11.76□□□□□ -0.53
GCA-208ENST00000479199 APLFQ8IW19 511 aaPredicted RBP11.76□□□□□ -0.53
GCA-208ENST00000479199 RBM12BQ8IXT5 1001 aaKnown RBP11.76□□□□□ -0.53
GCA-208ENST00000479199 SIDT2Q8NBJ9 832 aaKnown RBP11.76□□□□□ -0.53
GCA-208ENST00000479199 GDAP1Q8TB36 358 aa11.76□□□□□ -0.53
GCA-208ENST00000479199 TADA1Q96BN2 335 aa11.76□□□□□ -0.53
GCA-208ENST00000479199 SLC41A2Q96JW4 573 aa11.76□□□□□ -0.53
GCA-208ENST00000479199 VPS35Q96QK1 796 aa11.76□□□□□ -0.53
GCA-208ENST00000479199 MAP3K3Q99759 626 aa11.76□□□□□ -0.53
GCA-208ENST00000479199 PDE7BQ9NP56 450 aa11.76□□□□□ -0.53
GCA-208ENST00000479199 WASH6PQ9NQA3 447 aa11.76□□□□□ -0.53
GCA-208ENST00000479199 EPHA6Q9UF33 1036 aa11.76□□□□□ -0.53
GCA-208ENST00000479199 PSMD13Q9UNM6 376 aa11.76□□□□□ -0.53
GCA-208ENST00000479199 MDC1Q14676 2089 aaKnown RBP11.75□□□□□ -0.53
GCA-208ENST00000479199 ARGFXA6NJG6 315 aa11.75□□□□□ -0.53
GCA-208ENST00000479199 TTLL8A6PVC2 850 aa11.75□□□□□ -0.53
GCA-208ENST00000479199 VPS4BO75351 444 aa11.75□□□□□ -0.53
GCA-208ENST00000479199 PMPCBO75439 489 aa11.75□□□□□ -0.53
GCA-208ENST00000479199 NDST3O95803 873 aa11.75□□□□□ -0.53
GCA-208ENST00000479199 VCLP18206 1134 aa11.75□□□□□ -0.53
GCA-208ENST00000479199 FECHP22830 423 aa11.75□□□□□ -0.53
GCA-208ENST00000479199 PBLDP30039 288 aaPredicted RBP11.75□□□□□ -0.53
GCA-208ENST00000479199 CA5AP35218 305 aa11.75□□□□□ -0.53
GCA-208ENST00000479199 HALP42357 657 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms