RNA–Protein interactions for RNA: ENST00000478658.1

USF3-202, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 8,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-202ENST00000478658 SLC2A11Q9BYW1 496 aa5.39□□□□□ -1.55
USF3-202ENST00000478658 TCEAL2Q9H3H9 227 aaPredicted RBP5.39□□□□□ -1.55
USF3-202ENST00000478658 ANKHQ9HCJ1 492 aa5.39□□□□□ -1.55
USF3-202ENST00000478658 BIN3Q9NQY0 253 aa5.39□□□□□ -1.55
USF3-202ENST00000478658 STAU2Q9NUL3 570 aaKnown RBP eCLIP5.39□□□□□ -1.55
USF3-202ENST00000478658 PIM2Q9P1W9 311 aa5.39□□□□□ -1.55
USF3-202ENST00000478658 MLH3Q9UHC1 1453 aa5.39□□□□□ -1.55
USF3-202ENST00000478658 CD109Q6YHK3 1445 aa5.39□□□□□ -1.55
USF3-202ENST00000478658 A0A1W2PQ45 241 aaPredicted RBP5.39□□□□□ -1.55
USF3-202ENST00000478658 A0A1W2PQY0 241 aa5.39□□□□□ -1.55
USF3-202ENST00000478658 H7C2Y5 167 aa5.39□□□□□ -1.55
USF3-202ENST00000478658 ACOT7O00154 380 aa5.39□□□□□ -1.55
USF3-202ENST00000478658 CAPN15O75808 1086 aa5.39□□□□□ -1.55
USF3-202ENST00000478658 GHRHP01286 108 aa5.39□□□□□ -1.55
USF3-202ENST00000478658 PABPC4LP0CB38 370 aaKnown RBP5.39□□□□□ -1.55
USF3-202ENST00000478658 GKN3PP0CG01 181 aa5.39□□□□□ -1.55
USF3-202ENST00000478658 TSPAN8P19075 237 aa5.39□□□□□ -1.55
USF3-202ENST00000478658 THBS2P35442 1172 aa5.39□□□□□ -1.55
USF3-202ENST00000478658 PPT1P50897 306 aa5.39□□□□□ -1.55
USF3-202ENST00000478658 RHOAP61586 193 aa5.39□□□□□ -1.55
USF3-202ENST00000478658 ROR2Q01974 943 aaKnown RBP5.39□□□□□ -1.55
USF3-202ENST00000478658 CBWD6Q4V339 395 aa5.39□□□□□ -1.55
USF3-202ENST00000478658 MTX3Q5HYI7 312 aa5.39□□□□□ -1.55
USF3-202ENST00000478658 GPR139Q6DWJ6 353 aa5.39□□□□□ -1.55
USF3-202ENST00000478658 TATDN1Q6P1N9 297 aa5.39□□□□□ -1.55
USF3-202ENST00000478658 GALNTL5Q7Z4T8 443 aa5.39□□□□□ -1.55
USF3-202ENST00000478658 RAB43Q86YS6 212 aa5.39□□□□□ -1.55
USF3-202ENST00000478658 TEX29Q8N6K0 151 aa5.39□□□□□ -1.55
USF3-202ENST00000478658 MITD1Q8WV92 249 aa5.39□□□□□ -1.55
USF3-202ENST00000478658 SLC5A5Q92911 643 aa5.39□□□□□ -1.55
USF3-202ENST00000478658 AP2M1Q96CW1 435 aa5.39□□□□□ -1.55
USF3-202ENST00000478658 ERP27Q96DN0 273 aa5.39□□□□□ -1.55
USF3-202ENST00000478658 SEC16BQ96JE7 1060 aa5.39□□□□□ -1.55
USF3-202ENST00000478658 RASD1Q9Y272 281 aa5.39□□□□□ -1.55
USF3-202ENST00000478658 AK5Q9Y6K8 562 aa5.39□□□□□ -1.55
USF3-202ENST00000478658 URB2Q14146 1524 aaKnown RBP5.39□□□□□ -1.55
USF3-202ENST00000478658 ATP6AP2A0A1C7CYW4 349 aa5.39□□□□□ -1.55
USF3-202ENST00000478658 PMM2O15305 246 aa5.39□□□□□ -1.55
USF3-202ENST00000478658 MSH4O15457 936 aa5.39□□□□□ -1.55
USF3-202ENST00000478658 ABCB7O75027 752 aa5.39□□□□□ -1.55
USF3-202ENST00000478658 ATP6AP2O75787 350 aa5.39□□□□□ -1.55
USF3-202ENST00000478658 UPP2O95045 317 aa5.39□□□□□ -1.55
USF3-202ENST00000478658 AHSGP02765 367 aa5.39□□□□□ -1.55
USF3-202ENST00000478658 RNH1P13489 461 aaKnown RBP5.39□□□□□ -1.55
USF3-202ENST00000478658 GSTM3P21266 225 aa5.39□□□□□ -1.55
USF3-202ENST00000478658 NDUFS1P28331 727 aa5.39□□□□□ -1.55
USF3-202ENST00000478658 GTF2A2P52657 109 aa5.39□□□□□ -1.55
USF3-202ENST00000478658 PLGLB1Q02325 96 aa5.39□□□□□ -1.55
USF3-202ENST00000478658 PMPCAQ10713 525 aa5.39□□□□□ -1.55
USF3-202ENST00000478658 CBWD3Q5JTY5 395 aa5.39□□□□□ -1.55
USF3-202ENST00000478658 SCUBE1Q8IWY4 988 aa5.39□□□□□ -1.55
USF3-202ENST00000478658 NKAPQ8N5F7 415 aaKnown RBP5.39□□□□□ -1.55
USF3-202ENST00000478658 TTLL6Q8N841 843 aa5.39□□□□□ -1.55
USF3-202ENST00000478658 GLYATL1Q969I3 302 aa5.39□□□□□ -1.55
USF3-202ENST00000478658 TREX2Q9BQ50 279 aaPredicted RBP5.39□□□□□ -1.55
USF3-202ENST00000478658 CORO1BQ9BR76 489 aa5.39□□□□□ -1.55
USF3-202ENST00000478658 FTHL17Q9BXU8 183 aa5.39□□□□□ -1.55
USF3-202ENST00000478658 ZFP14Q9HCL3 533 aa5.39□□□□□ -1.55
USF3-202ENST00000478658 NSG1A0A0A6YYJ2 146 aa5.39□□□□□ -1.55
USF3-202ENST00000478658 ABHD14A-ACY1A0A1B0GW23 586 aa5.39□□□□□ -1.55
USF3-202ENST00000478658 ONECUT3O60422 494 aaPredicted RBP5.39□□□□□ -1.55
USF3-202ENST00000478658 DFNA5O60443 496 aa5.39□□□□□ -1.55
USF3-202ENST00000478658 CYP11A1P05108 521 aa5.39□□□□□ -1.55
USF3-202ENST00000478658 TYMPP19971 482 aa5.39□□□□□ -1.55
USF3-202ENST00000478658 NSG1P42857 185 aa5.39□□□□□ -1.55
USF3-202ENST00000478658 PPP2CAP67775 309 aa5.39□□□□□ -1.55
USF3-202ENST00000478658 ECT2LQ008S8 904 aa5.39□□□□□ -1.55
USF3-202ENST00000478658 CSHL1Q14406 222 aa5.39□□□□□ -1.55
USF3-202ENST00000478658 PDIA5Q14554 519 aa5.39□□□□□ -1.55
USF3-202ENST00000478658 MOGQ16653 247 aa5.39□□□□□ -1.55
USF3-202ENST00000478658 QPCTQ16769 361 aa5.39□□□□□ -1.55
USF3-202ENST00000478658 C11orf91Q3C1V1 193 aa5.39□□□□□ -1.55
USF3-202ENST00000478658 SYT6Q5T7P8 510 aaPredicted RBP5.39□□□□□ -1.55
USF3-202ENST00000478658 PRAMEF18Q5VWM3 479 aa5.39□□□□□ -1.55
USF3-202ENST00000478658 TMEM214Q6NUQ4 689 aaKnown RBP5.39□□□□□ -1.55
USF3-202ENST00000478658 FUT10Q6P4F1 479 aa5.39□□□□□ -1.55
USF3-202ENST00000478658 ZNF790Q6PG37 636 aa5.39□□□□□ -1.55
USF3-202ENST00000478658 ZC3H14Q6PJT7 736 aaKnown RBP5.39□□□□□ -1.55
USF3-202ENST00000478658 FBXO33Q7Z6M2 555 aa5.39□□□□□ -1.55
USF3-202ENST00000478658 ZNF619Q8N2I2 560 aa5.39□□□□□ -1.55
USF3-202ENST00000478658 CDYL2Q8N8U2 506 aa5.39□□□□□ -1.55
USF3-202ENST00000478658 OR5D16Q8NGK9 328 aa5.39□□□□□ -1.55
USF3-202ENST00000478658 GRIN3AQ8TCU5 1115 aa5.39□□□□□ -1.55
USF3-202ENST00000478658 SMAD5Q99717 465 aaKnown RBP5.39□□□□□ -1.55
USF3-202ENST00000478658 CPNE1Q99829 537 aa5.39□□□□□ -1.55
USF3-202ENST00000478658 SPIN2AQ99865 258 aa5.39□□□□□ -1.55
USF3-202ENST00000478658 SPIN2BQ9BPZ2 258 aa5.39□□□□□ -1.55
USF3-202ENST00000478658 GBA3Q9H227 469 aa5.39□□□□□ -1.55
USF3-202ENST00000478658 ATP13A3Q9H7F0 1226 aa5.39□□□□□ -1.55
USF3-202ENST00000478658 SLC39A2Q9NP94 309 aa5.39□□□□□ -1.55
USF3-202ENST00000478658 MEPEQ9NQ76 525 aaPredicted RBP5.39□□□□□ -1.55
USF3-202ENST00000478658 NCDNQ9UBB6 729 aa5.39□□□□□ -1.55
USF3-202ENST00000478658 ERVW-1Q9UQF0 538 aa5.39□□□□□ -1.55
USF3-202ENST00000478658 MAP4K5Q9Y4K4 846 aa5.39□□□□□ -1.55
USF3-202ENST00000478658 ZNF804BA4D1E1 1349 aa5.39□□□□□ -1.55
USF3-202ENST00000478658 PRORSD1PA6NEY8 169 aa5.38□□□□□ -1.55
USF3-202ENST00000478658 LRRC72A6NJI9 287 aa5.38□□□□□ -1.55
USF3-202ENST00000478658 PLSCR1O15162 318 aa5.38□□□□□ -1.55
USF3-202ENST00000478658 INPPL1O15357 1258 aa5.38□□□□□ -1.55
USF3-202ENST00000478658 CYP26A1O43174 497 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms