RNA–Protein interactions for RNA: ENST00000478063.2

LMNA-214, Transcript of lamin A/C, humanhuman

TSL 5

Gene LMNA, Length 285 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-214ENST00000478063 TRIM39Q9HCM9 518 aa13.15□□□□□ -0.3
LMNA-214ENST00000478063 MKS1Q9NXB0 559 aa13.15□□□□□ -0.3
LMNA-214ENST00000478063 ATXN10Q9UBB4 475 aa13.15□□□□□ -0.3
LMNA-214ENST00000478063 MBD1Q9UIS9 605 aaPredicted RBP13.15□□□□□ -0.3
LMNA-214ENST00000478063 SMG5Q9UPR3 1016 aaKnown RBP13.15□□□□□ -0.3
LMNA-214ENST00000478063 DMTF1Q9Y222 760 aa13.15□□□□□ -0.3
LMNA-214ENST00000478063 CA5BQ9Y2D0 317 aa13.15□□□□□ -0.3
LMNA-214ENST00000478063 MED16Q9Y2X0 877 aa13.15□□□□□ -0.3
LMNA-214ENST00000478063 TMEM98Q9Y2Y6 226 aa13.15□□□□□ -0.3
LMNA-214ENST00000478063 ZDBF2Q9HCK1 2354 aa13.15□□□□□ -0.3
LMNA-214ENST00000478063 MEI4A8MW99 385 aa13.14□□□□□ -0.31
LMNA-214ENST00000478063 C10orf142B7Z368 130 aa13.14□□□□□ -0.31
LMNA-214ENST00000478063 CACNB4O00305 520 aaPredicted RBP13.14□□□□□ -0.31
LMNA-214ENST00000478063 POLR3GO15318 223 aaPredicted RBP13.14□□□□□ -0.31
LMNA-214ENST00000478063 PRPF4O43172 522 aaKnown RBP eCLIP13.14□□□□□ -0.31
LMNA-214ENST00000478063 MAP3K13O43283 966 aa13.14□□□□□ -0.31
LMNA-214ENST00000478063 TYROBPO43914 113 aa13.14□□□□□ -0.31
LMNA-214ENST00000478063 VEGFDO43915 354 aa13.14□□□□□ -0.31
LMNA-214ENST00000478063 DNAJC6O75061 913 aa13.14□□□□□ -0.31
LMNA-214ENST00000478063 GLRA3O75311 464 aa13.14□□□□□ -0.31
LMNA-214ENST00000478063 TOP3BO95985 862 aaKnown RBP13.14□□□□□ -0.31
LMNA-214ENST00000478063 FTH1P02794 183 aa13.14□□□□□ -0.31
LMNA-214ENST00000478063 MYCLP1P12525 358 aaPredicted RBP13.14□□□□□ -0.31
LMNA-214ENST00000478063 CD9P21926 228 aa13.14□□□□□ -0.31
LMNA-214ENST00000478063 HOXA6P31267 233 aa13.14□□□□□ -0.31
LMNA-214ENST00000478063 TRIM23P36406 574 aa13.14□□□□□ -0.31
LMNA-214ENST00000478063 NUDT1P36639 197 aa13.14□□□□□ -0.31
LMNA-214ENST00000478063 FNTBP49356 437 aa13.14□□□□□ -0.31
LMNA-214ENST00000478063 CSRP3P50461 194 aa13.14□□□□□ -0.31
LMNA-214ENST00000478063 ATP1A2P50993 1020 aa13.14□□□□□ -0.31
LMNA-214ENST00000478063 CTSCP53634 463 aa13.14□□□□□ -0.31
LMNA-214ENST00000478063 TIAL1Q01085 375 aaKnown RBP eCLIP13.14□□□□□ -0.31
LMNA-214ENST00000478063 RPL6Q02878 288 aaKnown RBP13.14□□□□□ -0.31
LMNA-214ENST00000478063 SEPT7Q16181 437 aaKnown RBP13.14□□□□□ -0.31
LMNA-214ENST00000478063 SLC36A4Q6YBV0 504 aa13.14□□□□□ -0.31
LMNA-214ENST00000478063 CCDC91Q7Z6B0 441 aa13.14□□□□□ -0.31
LMNA-214ENST00000478063 TRAPPC5Q8IUR0 188 aa13.14□□□□□ -0.31
LMNA-214ENST00000478063 CD200R1Q8TD46 325 aa13.14□□□□□ -0.31
LMNA-214ENST00000478063 KCTD4Q8WVF5 259 aa13.14□□□□□ -0.31
LMNA-214ENST00000478063 FOXJ1Q92949 421 aa13.14□□□□□ -0.31
LMNA-214ENST00000478063 FUBP1Q96AE4 644 aaKnown RBP13.14□□□□□ -0.31
LMNA-214ENST00000478063 PCED1AQ9H1Q7 454 aa13.14□□□□□ -0.31
LMNA-214ENST00000478063 EBF2Q9HAK2 575 aa13.14□□□□□ -0.31
LMNA-214ENST00000478063 SYTL2Q9HCH5 934 aa13.14□□□□□ -0.31
LMNA-214ENST00000478063 NKIRAS1Q9NYS0 192 aa13.14□□□□□ -0.31
LMNA-214ENST00000478063 OGFRQ9NZT2 677 aa13.14□□□□□ -0.31
LMNA-214ENST00000478063 GALPQ9UBC7 116 aa13.14□□□□□ -0.31
LMNA-214ENST00000478063 DCDC2Q9UHG0 476 aa13.14□□□□□ -0.31
LMNA-214ENST00000478063 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.14□□□□□ -0.31
LMNA-214ENST00000478063 GON4LQ3T8J9 2241 aa13.13□□□□□ -0.31
LMNA-214ENST00000478063 TMEM131Q92545 1883 aa13.13□□□□□ -0.31
LMNA-214ENST00000478063 CCDC163A0A0D9SF12 145 aa13.13□□□□□ -0.31
LMNA-214ENST00000478063 POM121BA6NF01 834 aa13.13□□□□□ -0.31
LMNA-214ENST00000478063 PRAMEF26H0Y7S4 382 aa13.13□□□□□ -0.31
LMNA-214ENST00000478063 H0Y8X5 98 aa13.13□□□□□ -0.31
LMNA-214ENST00000478063 SGTAO43765 313 aa13.13□□□□□ -0.31
LMNA-214ENST00000478063 MAGEC1O60732 1142 aa13.13□□□□□ -0.31
LMNA-214ENST00000478063 GSTA1P08263 222 aa13.13□□□□□ -0.31
LMNA-214ENST00000478063 CCDC166P0CW27 439 aa13.13□□□□□ -0.31
LMNA-214ENST00000478063 ZNF37AP17032 561 aaPredicted RBP13.13□□□□□ -0.31
LMNA-214ENST00000478063 ZNF8P17098 575 aaPredicted RBP13.13□□□□□ -0.31
LMNA-214ENST00000478063 BCKDHBP21953 392 aa13.13□□□□□ -0.31
LMNA-214ENST00000478063 PBLDP30039 288 aaPredicted RBP13.13□□□□□ -0.31
LMNA-214ENST00000478063 RPA3P35244 121 aaPredicted RBP13.13□□□□□ -0.31
LMNA-214ENST00000478063 SKIV2L2P42285 1042 aaKnown RBP13.13□□□□□ -0.31
LMNA-214ENST00000478063 CCT5P48643 541 aa13.13□□□□□ -0.31
LMNA-214ENST00000478063 PRLHRP49683 370 aa13.13□□□□□ -0.31
LMNA-214ENST00000478063 CLCN7P51798 805 aa13.13□□□□□ -0.31
LMNA-214ENST00000478063 CSTF1Q05048 431 aaKnown RBP13.13□□□□□ -0.31
LMNA-214ENST00000478063 CSHL1Q14406 222 aa13.13□□□□□ -0.31
LMNA-214ENST00000478063 TMEM220Q6QAJ8 160 aa13.13□□□□□ -0.31
LMNA-214ENST00000478063 PAQR3Q6TCH7 311 aa13.13□□□□□ -0.31
LMNA-214ENST00000478063 CRTC3Q6UUV7 619 aa13.13□□□□□ -0.31
LMNA-214ENST00000478063 TMEM207Q6UWW9 146 aa13.13□□□□□ -0.31
LMNA-214ENST00000478063 GCNT7Q6ZNI0 430 aa13.13□□□□□ -0.31
LMNA-214ENST00000478063 CDHR3Q6ZTQ4 885 aa13.13□□□□□ -0.31
LMNA-214ENST00000478063 OTOAQ7RTW8 1153 aa13.13□□□□□ -0.31
LMNA-214ENST00000478063 C1orf210Q8IVY1 113 aa13.13□□□□□ -0.31
LMNA-214ENST00000478063 CPNE9Q8IYJ1 553 aa13.13□□□□□ -0.31
LMNA-214ENST00000478063 CENPLQ8N0S6 344 aaPredicted RBP13.13□□□□□ -0.31
LMNA-214ENST00000478063 PLD6Q8N2A8 252 aaKnown RBP13.13□□□□□ -0.31
LMNA-214ENST00000478063 ZBTB2Q8N680 514 aa13.13□□□□□ -0.31
LMNA-214ENST00000478063 BEND7Q8N7W2 519 aaPredicted RBP13.13□□□□□ -0.31
LMNA-214ENST00000478063 DTWD2Q8NBA8 298 aa13.13□□□□□ -0.31
LMNA-214ENST00000478063 GIMAP7Q8NHV1 300 aa13.13□□□□□ -0.31
LMNA-214ENST00000478063 MGARPQ8TDB4 240 aa13.13□□□□□ -0.31
LMNA-214ENST00000478063 TCP10LQ8TDR4 215 aa13.13□□□□□ -0.31
LMNA-214ENST00000478063 INPP5DQ92835 1189 aa13.13□□□□□ -0.31
LMNA-214ENST00000478063 SLC30A3Q99726 388 aa13.13□□□□□ -0.31
LMNA-214ENST00000478063 UNKQ9C0B0 810 aaKnown RBP13.13□□□□□ -0.31
LMNA-214ENST00000478063 CNOT10Q9H9A5 744 aaKnown RBP13.13□□□□□ -0.31
LMNA-214ENST00000478063 SPATS2LQ9NUQ6 558 aaKnown RBP13.13□□□□□ -0.31
LMNA-214ENST00000478063 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.13□□□□□ -0.31
LMNA-214ENST00000478063 SLC17A7Q9P2U7 560 aa13.13□□□□□ -0.31
LMNA-214ENST00000478063 GRID1Q9ULK0 1009 aa13.13□□□□□ -0.31
LMNA-214ENST00000478063 DHRS7Q9Y394 339 aa13.13□□□□□ -0.31
LMNA-214ENST00000478063 A0A1W2PPC4 97 aa13.12□□□□□ -0.31
LMNA-214ENST00000478063 A6NNZ2 444 aa13.12□□□□□ -0.31
LMNA-214ENST00000478063 METTL12A8MUP2 240 aa13.12□□□□□ -0.31
LMNA-214ENST00000478063 KLHL2O95198 593 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms