RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 DTNAQ9Y4J8 743 aa4.93□□□□□ -1.62
SF3B6-202ENST00000478050 ASB3Q9Y575 518 aa4.93□□□□□ -1.62
SF3B6-202ENST00000478050 KMT2BQ9UMN6 2715 aaPredicted RBP4.93□□□□□ -1.62
SF3B6-202ENST00000478050 ANAPC1Q9H1A4 1944 aa4.92□□□□□ -1.62
SF3B6-202ENST00000478050 IGLV3-10A0A075B6K4 115 aa4.92□□□□□ -1.62
SF3B6-202ENST00000478050 FAM92AA1XBS5 289 aa4.92□□□□□ -1.62
SF3B6-202ENST00000478050 MROH6A6NGR9 719 aa4.92□□□□□ -1.62
SF3B6-202ENST00000478050 OR6C75A6NL08 312 aa4.92□□□□□ -1.62
SF3B6-202ENST00000478050 EIF4E1BA6NMX2 242 aaKnown RBP4.92□□□□□ -1.62
SF3B6-202ENST00000478050 DRGXA6NNA5 263 aa4.92□□□□□ -1.62
SF3B6-202ENST00000478050 A8MT66 165 aa4.92□□□□□ -1.62
SF3B6-202ENST00000478050 H3BNX3 289 aa4.92□□□□□ -1.62
SF3B6-202ENST00000478050 TRIM38O00635 465 aa4.92□□□□□ -1.62
SF3B6-202ENST00000478050 SYN3O14994 580 aa4.92□□□□□ -1.62
SF3B6-202ENST00000478050 SMIM24O75264 130 aa4.92□□□□□ -1.62
SF3B6-202ENST00000478050 SKAP2O75563 359 aaPredicted RBP4.92□□□□□ -1.62
SF3B6-202ENST00000478050 IPO13O94829 963 aaKnown RBP4.92□□□□□ -1.62
SF3B6-202ENST00000478050 OAZ2O95190 189 aa4.92□□□□□ -1.62
SF3B6-202ENST00000478050 WISP3O95389 354 aaPredicted RBP4.92□□□□□ -1.62
SF3B6-202ENST00000478050 PEX11BO96011 259 aa4.92□□□□□ -1.62
SF3B6-202ENST00000478050 FGF1P05230 155 aa4.92□□□□□ -1.62
SF3B6-202ENST00000478050 ASGR1P07306 291 aa4.92□□□□□ -1.62
SF3B6-202ENST00000478050 FESP07332 822 aa4.92□□□□□ -1.62
SF3B6-202ENST00000478050 UBTFL6P0CB48 400 aaPredicted RBP4.92□□□□□ -1.62
SF3B6-202ENST00000478050 ENO3P13929 434 aaPredicted RBP4.92□□□□□ -1.62
SF3B6-202ENST00000478050 HLA-DPA1P20036 260 aa4.92□□□□□ -1.62
SF3B6-202ENST00000478050 OGNP20774 298 aaKnown RBP4.92□□□□□ -1.62
SF3B6-202ENST00000478050 PEX2P28328 305 aa4.92□□□□□ -1.62
SF3B6-202ENST00000478050 CD86P42081 329 aa4.92□□□□□ -1.62
SF3B6-202ENST00000478050 CCR10P46092 362 aa4.92□□□□□ -1.62
SF3B6-202ENST00000478050 ALDH1A3P47895 512 aa4.92□□□□□ -1.62
SF3B6-202ENST00000478050 PSMD8P48556 350 aa4.92□□□□□ -1.62
SF3B6-202ENST00000478050 HSPA13P48723 471 aa4.92□□□□□ -1.62
SF3B6-202ENST00000478050 MAPKAPK2P49137 400 aa4.92□□□□□ -1.62
SF3B6-202ENST00000478050 FLT3LGP49771 235 aa4.92□□□□□ -1.62
SF3B6-202ENST00000478050 KPNA1P52294 538 aaPredicted RBP4.92□□□□□ -1.62
SF3B6-202ENST00000478050 YBEYP58557 167 aaPredicted RBP4.92□□□□□ -1.62
SF3B6-202ENST00000478050 ERVFC1P60507 584 aa4.92□□□□□ -1.62
SF3B6-202ENST00000478050 PRAMEP78395 509 aa4.92□□□□□ -1.62
SF3B6-202ENST00000478050 NFKB2Q00653 900 aa4.92□□□□□ -1.62
SF3B6-202ENST00000478050 ACVR1Q04771 509 aa4.92□□□□□ -1.62
SF3B6-202ENST00000478050 SULT2A1Q06520 285 aa4.92□□□□□ -1.62
SF3B6-202ENST00000478050 RING1Q06587 406 aa4.92□□□□□ -1.62
SF3B6-202ENST00000478050 DSC1Q08554 894 aa4.92□□□□□ -1.62
SF3B6-202ENST00000478050 ITKQ08881 620 aa4.92□□□□□ -1.62
SF3B6-202ENST00000478050 STX5Q13190 355 aa4.92□□□□□ -1.62
SF3B6-202ENST00000478050 MED21Q13503 144 aa4.92□□□□□ -1.62
SF3B6-202ENST00000478050 BTG3Q14201 252 aaPredicted RBP4.92□□□□□ -1.62
SF3B6-202ENST00000478050 FLOT2Q14254 428 aa4.92□□□□□ -1.62
SF3B6-202ENST00000478050 CSHL1Q14406 222 aa4.92□□□□□ -1.62
SF3B6-202ENST00000478050 ZNF460Q14592 562 aa4.92□□□□□ -1.62
SF3B6-202ENST00000478050 ACAP2Q15057 778 aa4.92□□□□□ -1.62
SF3B6-202ENST00000478050 TRIP10Q15642 601 aa4.92□□□□□ -1.62
SF3B6-202ENST00000478050 PDCD2Q16342 344 aaPredicted RBP4.92□□□□□ -1.62
SF3B6-202ENST00000478050 LRRC26Q2I0M4 334 aa4.92□□□□□ -1.62
SF3B6-202ENST00000478050 TRIM71Q2Q1W2 868 aaKnown RBP4.92□□□□□ -1.62
SF3B6-202ENST00000478050 PARP15Q460N3 678 aa4.92□□□□□ -1.62
SF3B6-202ENST00000478050 SLC39A12Q504Y0 691 aa4.92□□□□□ -1.62
SF3B6-202ENST00000478050 SFT2D3Q587I9 215 aa4.92□□□□□ -1.62
SF3B6-202ENST00000478050 MS4A13Q5J8X5 152 aa4.92□□□□□ -1.62
SF3B6-202ENST00000478050 RARS2Q5T160 578 aaKnown RBP4.92□□□□□ -1.62
SF3B6-202ENST00000478050 RBM20Q5T481 1227 aaKnown RBP4.92□□□□□ -1.62
SF3B6-202ENST00000478050 OGFRL1Q5TC84 451 aaPredicted RBP4.92□□□□□ -1.62
SF3B6-202ENST00000478050 HECTD2Q5U5R9 776 aa4.92□□□□□ -1.62
SF3B6-202ENST00000478050 CNSTQ6PJW8 725 aa4.92□□□□□ -1.62
SF3B6-202ENST00000478050 HACD2Q6Y1H2 254 aa4.92□□□□□ -1.62
SF3B6-202ENST00000478050 RNF111Q6ZNA4 994 aa4.92□□□□□ -1.62
SF3B6-202ENST00000478050 UBE3DQ7Z6J8 389 aa4.92□□□□□ -1.62
SF3B6-202ENST00000478050 THAP5Q7Z6K1 395 aa4.92□□□□□ -1.62
SF3B6-202ENST00000478050 MFSD6LQ8IWD5 586 aa4.92□□□□□ -1.62
SF3B6-202ENST00000478050 PELI3Q8N2H9 469 aa4.92□□□□□ -1.62
SF3B6-202ENST00000478050 BBS5Q8N3I7 341 aa4.92□□□□□ -1.62
SF3B6-202ENST00000478050 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.92□□□□□ -1.62
SF3B6-202ENST00000478050 PCSK9Q8NBP7 692 aaKnown RBP4.92□□□□□ -1.62
SF3B6-202ENST00000478050 ICA1LQ8NDH6 482 aa4.92□□□□□ -1.62
SF3B6-202ENST00000478050 KLHDC9Q8NEP7 349 aa4.92□□□□□ -1.62
SF3B6-202ENST00000478050 ADCY4Q8NFM4 1077 aa4.92□□□□□ -1.62
SF3B6-202ENST00000478050 GPR150Q8NGU9 434 aa4.92□□□□□ -1.62
SF3B6-202ENST00000478050 RIN3Q8TB24 985 aa4.92□□□□□ -1.62
SF3B6-202ENST00000478050 BAHD1Q8TBE0 780 aaPredicted RBP4.92□□□□□ -1.62
SF3B6-202ENST00000478050 TRIB2Q92519 343 aa4.92□□□□□ -1.62
SF3B6-202ENST00000478050 TOP1MTQ969P6 601 aa4.92□□□□□ -1.62
SF3B6-202ENST00000478050 TADA1Q96BN2 335 aa4.92□□□□□ -1.62
SF3B6-202ENST00000478050 RCN3Q96D15 328 aa4.92□□□□□ -1.62
SF3B6-202ENST00000478050 L3HYPDHQ96EM0 354 aa4.92□□□□□ -1.62
SF3B6-202ENST00000478050 HMCESQ96FZ2 354 aa4.92□□□□□ -1.62
SF3B6-202ENST00000478050 ZNF419Q96HQ0 510 aaPredicted RBP4.92□□□□□ -1.62
SF3B6-202ENST00000478050 FEM1CQ96JP0 617 aa4.92□□□□□ -1.62
SF3B6-202ENST00000478050 BTN2A3PQ96KV6 586 aa4.92□□□□□ -1.62
SF3B6-202ENST00000478050 LRGUKQ96M69 825 aa4.92□□□□□ -1.62
SF3B6-202ENST00000478050 CDRT15Q96T59 188 aa4.92□□□□□ -1.62
SF3B6-202ENST00000478050 TSC22D3Q99576 134 aa4.92□□□□□ -1.62
SF3B6-202ENST00000478050 CENPKQ9BS16 269 aa4.92□□□□□ -1.62
SF3B6-202ENST00000478050 MRPL1Q9BYD6 325 aaKnown RBP4.92□□□□□ -1.62
SF3B6-202ENST00000478050 YIPF3Q9GZM5 350 aa4.92□□□□□ -1.62
SF3B6-202ENST00000478050 EBF3Q9H4W6 596 aa4.92□□□□□ -1.62
SF3B6-202ENST00000478050 RETREG1Q9H6L5 497 aa4.92□□□□□ -1.62
SF3B6-202ENST00000478050 NOL6Q9H6R4 1146 aaKnown RBP4.92□□□□□ -1.62
SF3B6-202ENST00000478050 WDR41Q9HAD4 459 aa4.92□□□□□ -1.62
SF3B6-202ENST00000478050 MEAF6Q9HAF1 191 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms