RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 SNX7Q9UNH6 387 aa19.85■□□□□ 0.77
PDLIM1-202ENST00000477757 PDZD2O15018 2839 aa19.85■□□□□ 0.77
PDLIM1-202ENST00000477757 ZNF185O15231 689 aa19.84■□□□□ 0.77
PDLIM1-202ENST00000477757 HNRNPRO43390 633 aaKnown RBP19.84■□□□□ 0.77
PDLIM1-202ENST00000477757 RAB40ALP0C0E4 278 aa19.84■□□□□ 0.77
PDLIM1-202ENST00000477757 PRF1P14222 555 aa19.84■□□□□ 0.77
PDLIM1-202ENST00000477757 IL4RP24394 825 aa19.84■□□□□ 0.77
PDLIM1-202ENST00000477757 VAV2P52735 878 aa19.84■□□□□ 0.77
PDLIM1-202ENST00000477757 DCDC1P59894 354 aa19.84■□□□□ 0.77
PDLIM1-202ENST00000477757 TUBB4BP68371 445 aa19.84■□□□□ 0.77
PDLIM1-202ENST00000477757 TUBB2AQ13885 445 aa19.84■□□□□ 0.77
PDLIM1-202ENST00000477757 CERS6Q6ZMG9 384 aa19.84■□□□□ 0.77
PDLIM1-202ENST00000477757 MED25Q71SY5 747 aa19.84■□□□□ 0.77
PDLIM1-202ENST00000477757 TMEM126BQ8IUX1 230 aa19.84■□□□□ 0.77
PDLIM1-202ENST00000477757 ZNF547Q8IVP9 402 aa19.84■□□□□ 0.77
PDLIM1-202ENST00000477757 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP19.84■□□□□ 0.77
PDLIM1-202ENST00000477757 ENDOVQ8N8Q3 282 aaKnown RBP19.84■□□□□ 0.77
PDLIM1-202ENST00000477757 ARRDC2Q8TBH0 407 aa19.84■□□□□ 0.77
PDLIM1-202ENST00000477757 MARVELD3Q96A59 401 aa19.84■□□□□ 0.77
PDLIM1-202ENST00000477757 PCMTD1Q96MG8 357 aaPredicted RBP19.84■□□□□ 0.77
PDLIM1-202ENST00000477757 LRFN5Q96NI6 719 aa19.84■□□□□ 0.77
PDLIM1-202ENST00000477757 RANBP9Q96S59 729 aa19.84■□□□□ 0.77
PDLIM1-202ENST00000477757 CD180Q99467 661 aa19.84■□□□□ 0.77
PDLIM1-202ENST00000477757 ZSCAN5AQ9BUG6 496 aa19.84■□□□□ 0.77
PDLIM1-202ENST00000477757 TUBB2BQ9BVA1 445 aa19.84■□□□□ 0.77
PDLIM1-202ENST00000477757 SPATA16Q9BXB7 569 aa19.84■□□□□ 0.77
PDLIM1-202ENST00000477757 DTLQ9NZJ0 730 aa19.84■□□□□ 0.77
PDLIM1-202ENST00000477757 NFKBIL1Q9UBC1 381 aaPredicted RBP19.84■□□□□ 0.77
PDLIM1-202ENST00000477757 AMACRQ9UHK6 382 aa19.84■□□□□ 0.77
PDLIM1-202ENST00000477757 POLEQ07864 2286 aa19.84■□□□□ 0.77
PDLIM1-202ENST00000477757 TLCD2A6NGC4 264 aa19.83■□□□□ 0.77
PDLIM1-202ENST00000477757 A6NL46 340 aa19.83■□□□□ 0.77
PDLIM1-202ENST00000477757 TMCO5BA8MYB1 307 aa19.83■□□□□ 0.77
PDLIM1-202ENST00000477757 TCF4P15884 667 aa19.83■□□□□ 0.77
PDLIM1-202ENST00000477757 IDSP22304 550 aa19.83■□□□□ 0.77
PDLIM1-202ENST00000477757 FECHP22830 423 aa19.83■□□□□ 0.77
PDLIM1-202ENST00000477757 DRG2P55039 364 aaKnown RBP19.83■□□□□ 0.77
PDLIM1-202ENST00000477757 GSDMDP57764 484 aa19.83■□□□□ 0.77
PDLIM1-202ENST00000477757 QPCTQ16769 361 aa19.83■□□□□ 0.77
PDLIM1-202ENST00000477757 PLEKHN1Q494U1 663 aaPredicted RBP19.83■□□□□ 0.77
PDLIM1-202ENST00000477757 CT47A1Q5JQC4 288 aaPredicted RBP19.83■□□□□ 0.77
PDLIM1-202ENST00000477757 VWA5B1Q5TIE3 1220 aa19.83■□□□□ 0.77
PDLIM1-202ENST00000477757 PDPK2PQ6A1A2 396 aa19.83■□□□□ 0.77
PDLIM1-202ENST00000477757 KLHL35Q6PF15 583 aa19.83■□□□□ 0.77
PDLIM1-202ENST00000477757 D2HGDHQ8N465 521 aa19.83■□□□□ 0.77
PDLIM1-202ENST00000477757 SLC38A9Q8NBW4 561 aa19.83■□□□□ 0.77
PDLIM1-202ENST00000477757 OR8K5Q8NH50 307 aa19.83■□□□□ 0.77
PDLIM1-202ENST00000477757 HSPH1Q92598 858 aa19.83■□□□□ 0.77
PDLIM1-202ENST00000477757 GLYATL1Q969I3 302 aa19.83■□□□□ 0.77
PDLIM1-202ENST00000477757 MAP3K3Q99759 626 aa19.83■□□□□ 0.77
PDLIM1-202ENST00000477757 CLSTN2Q9H4D0 955 aa19.83■□□□□ 0.77
PDLIM1-202ENST00000477757 LATS2Q9NRM7 1088 aa19.83■□□□□ 0.77
PDLIM1-202ENST00000477757 HAUS2Q9NVX0 235 aa19.83■□□□□ 0.77
PDLIM1-202ENST00000477757 C5AR2Q9P296 337 aa19.83■□□□□ 0.77
PDLIM1-202ENST00000477757 TCFL5Q9UL49 500 aa19.83■□□□□ 0.77
PDLIM1-202ENST00000477757 ENTPD4Q9Y227 616 aa19.83■□□□□ 0.77
PDLIM1-202ENST00000477757 B3GNT3Q9Y2A9 372 aa19.83■□□□□ 0.77
PDLIM1-202ENST00000477757 TTLL3Q9Y4R7 772 aa19.83■□□□□ 0.77
PDLIM1-202ENST00000477757 CSMD2Q7Z408 3487 aa19.82■□□□□ 0.76
PDLIM1-202ENST00000477757 CROCCQ5TZA2 2017 aa19.82■□□□□ 0.76
PDLIM1-202ENST00000477757 SETD2Q9BYW2 2564 aaPredicted RBP19.82■□□□□ 0.76
PDLIM1-202ENST00000477757 FERP16591 822 aa19.82■□□□□ 0.76
PDLIM1-202ENST00000477757 ARL4DP49703 201 aa19.82■□□□□ 0.76
PDLIM1-202ENST00000477757 ZNF165P49910 485 aa19.82■□□□□ 0.76
PDLIM1-202ENST00000477757 RRADP55042 308 aa19.82■□□□□ 0.76
PDLIM1-202ENST00000477757 HSD11B2P80365 405 aa19.82■□□□□ 0.76
PDLIM1-202ENST00000477757 ELOAQ14241 798 aaKnown RBP19.82■□□□□ 0.76
PDLIM1-202ENST00000477757 BOLA3Q53S33 107 aa19.82■□□□□ 0.76
PDLIM1-202ENST00000477757 ALS2CLQ60I27 953 aa19.82■□□□□ 0.76
PDLIM1-202ENST00000477757 CISD2Q8N5K1 135 aaKnown RBP19.82■□□□□ 0.76
PDLIM1-202ENST00000477757 FATE1Q969F0 183 aa19.82■□□□□ 0.76
PDLIM1-202ENST00000477757 ZNF501Q96CX3 271 aaPredicted RBP19.82■□□□□ 0.76
PDLIM1-202ENST00000477757 EID2BQ96D98 161 aa19.82■□□□□ 0.76
PDLIM1-202ENST00000477757 MLPHQ9BV36 600 aaPredicted RBP19.82■□□□□ 0.76
PDLIM1-202ENST00000477757 NLNQ9BYT8 704 aa19.82■□□□□ 0.76
PDLIM1-202ENST00000477757 PCDH18Q9HCL0 1135 aa19.82■□□□□ 0.76
PDLIM1-202ENST00000477757 PCSK5Q92824 1860 aa19.82■□□□□ 0.76
PDLIM1-202ENST00000477757 VEGFDO43915 354 aa19.81■□□□□ 0.76
PDLIM1-202ENST00000477757 MFSD11O43934 449 aa19.81■□□□□ 0.76
PDLIM1-202ENST00000477757 KLK3P07288 261 aaPredicted RBP19.81■□□□□ 0.76
PDLIM1-202ENST00000477757 CCDC172P0C7W6 258 aa19.81■□□□□ 0.76
PDLIM1-202ENST00000477757 NIPAL4Q0D2K0 466 aa19.81■□□□□ 0.76
PDLIM1-202ENST00000477757 GALNT2Q10471 571 aa19.81■□□□□ 0.76
PDLIM1-202ENST00000477757 NAA30Q147X3 362 aaPredicted RBP19.81■□□□□ 0.76
PDLIM1-202ENST00000477757 DNTTIP2Q5QJE6 756 aaKnown RBP19.81■□□□□ 0.76
PDLIM1-202ENST00000477757 LCN10Q6JVE6 187 aa19.81■□□□□ 0.76
PDLIM1-202ENST00000477757 TIGD7Q6NT04 549 aaPredicted RBP19.81■□□□□ 0.76
PDLIM1-202ENST00000477757 C11orf96Q7Z7L8 435 aa19.81■□□□□ 0.76
PDLIM1-202ENST00000477757 TRAM1L1Q8N609 369 aa19.81■□□□□ 0.76
PDLIM1-202ENST00000477757 GPR26Q8NDV2 337 aa19.81■□□□□ 0.76
PDLIM1-202ENST00000477757 GPR150Q8NGU9 434 aa19.81■□□□□ 0.76
PDLIM1-202ENST00000477757 BARD1Q99728 777 aaKnown RBP19.81■□□□□ 0.76
PDLIM1-202ENST00000477757 NUP85Q9BW27 656 aa19.81■□□□□ 0.76
PDLIM1-202ENST00000477757 KCND1Q9NSA2 647 aa19.81■□□□□ 0.76
PDLIM1-202ENST00000477757 WDR37Q9Y2I8 494 aa19.81■□□□□ 0.76
PDLIM1-202ENST00000477757 SCINQ9Y6U3 715 aa19.81■□□□□ 0.76
PDLIM1-202ENST00000477757 AKAP9Q99996 3911 aa19.81■□□□□ 0.76
PDLIM1-202ENST00000477757 NF1P21359 2839 aa19.8■□□□□ 0.76
PDLIM1-202ENST00000477757 LGALS16A8MUM7 142 aa19.8■□□□□ 0.76
PDLIM1-202ENST00000477757 ANKRD66B4E2M5 251 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms