RNA–Protein interactions for RNA: ENST00000477649.1

VMA21-203, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 3

Gene VMA21, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-203ENST00000477649 PGM1P36871 562 aa7.84□□□□□ -1.15
VMA21-203ENST00000477649 GMPRP36959 345 aa7.84□□□□□ -1.15
VMA21-203ENST00000477649 MRPL19P49406 292 aaKnown RBP7.84□□□□□ -1.15
VMA21-203ENST00000477649 ACADVLP49748 655 aa7.84□□□□□ -1.15
VMA21-203ENST00000477649 CDKN1CP49918 316 aaPredicted RBP7.84□□□□□ -1.15
VMA21-203ENST00000477649 MXRA7P84157 204 aa7.84□□□□□ -1.15
VMA21-203ENST00000477649 CLCQ05315 142 aa7.84□□□□□ -1.15
VMA21-203ENST00000477649 KLF10Q13118 480 aa7.84□□□□□ -1.15
VMA21-203ENST00000477649 SQLEQ14534 574 aa7.84□□□□□ -1.15
VMA21-203ENST00000477649 CBX2Q14781 532 aaPredicted RBP7.84□□□□□ -1.15
VMA21-203ENST00000477649 NAA25Q14CX7 972 aa7.84□□□□□ -1.15
VMA21-203ENST00000477649 TSNQ15631 228 aaKnown RBP7.84□□□□□ -1.15
VMA21-203ENST00000477649 PFKFB4Q16877 469 aa7.84□□□□□ -1.15
VMA21-203ENST00000477649 TRMT5Q32P41 509 aaKnown RBP7.84□□□□□ -1.15
VMA21-203ENST00000477649 HNRNPA1L2Q32P51 320 aaKnown RBP7.84□□□□□ -1.15
VMA21-203ENST00000477649 LSM12Q3MHD2 195 aaKnown RBP7.84□□□□□ -1.15
VMA21-203ENST00000477649 SLC9B1Q4ZJI4 515 aa7.84□□□□□ -1.15
VMA21-203ENST00000477649 PLEKHS1Q5SXH7 462 aa7.84□□□□□ -1.15
VMA21-203ENST00000477649 RARS2Q5T160 578 aaKnown RBP7.84□□□□□ -1.15
VMA21-203ENST00000477649 FAM46CQ5VWP2 391 aa7.84□□□□□ -1.15
VMA21-203ENST00000477649 FBXW10Q5XX13 1052 aa7.84□□□□□ -1.15
VMA21-203ENST00000477649 TMEM215Q68D42 235 aa7.84□□□□□ -1.15
VMA21-203ENST00000477649 SULT1C3Q6IMI6 304 aa7.84□□□□□ -1.15
VMA21-203ENST00000477649 CES5AQ6NT32 575 aa7.84□□□□□ -1.15
VMA21-203ENST00000477649 ANKRD54Q6NXT1 300 aa7.84□□□□□ -1.15
VMA21-203ENST00000477649 C16orf89Q6UX73 402 aa7.84□□□□□ -1.15
VMA21-203ENST00000477649 CHSY3Q70JA7 882 aa7.84□□□□□ -1.15
VMA21-203ENST00000477649 TTC7BQ86TV6 843 aa7.84□□□□□ -1.15
VMA21-203ENST00000477649 LAPTM4BQ86VI4 370 aa7.84□□□□□ -1.15
VMA21-203ENST00000477649 ZSWIM9Q86XI8 627 aa7.84□□□□□ -1.15
VMA21-203ENST00000477649 TREML1Q86YW5 311 aa7.84□□□□□ -1.15
VMA21-203ENST00000477649 YAF2Q8IY57 180 aa7.84□□□□□ -1.15
VMA21-203ENST00000477649 KIF2BQ8N4N8 673 aa7.84□□□□□ -1.15
VMA21-203ENST00000477649 SIDT2Q8NBJ9 832 aaKnown RBP7.84□□□□□ -1.15
VMA21-203ENST00000477649 PDPRQ8NCN5 879 aa7.84□□□□□ -1.15
VMA21-203ENST00000477649 GPR26Q8NDV2 337 aa7.84□□□□□ -1.15
VMA21-203ENST00000477649 ZNF483Q8TF39 744 aaPredicted RBP7.84□□□□□ -1.15
VMA21-203ENST00000477649 TSPEARQ8WU66 669 aa7.84□□□□□ -1.15
VMA21-203ENST00000477649 ING5Q8WYH8 240 aa7.84□□□□□ -1.15
VMA21-203ENST00000477649 OR8D1Q8WZ84 308 aa7.84□□□□□ -1.15
VMA21-203ENST00000477649 VOPP1Q96AW1 172 aa7.84□□□□□ -1.15
VMA21-203ENST00000477649 RIPOR3Q96MK2 946 aa7.84□□□□□ -1.15
VMA21-203ENST00000477649 ANKRD27Q96NW4 1050 aa7.84□□□□□ -1.15
VMA21-203ENST00000477649 ZNF382Q96SR6 550 aa7.84□□□□□ -1.15
VMA21-203ENST00000477649 SERPINI1Q99574 410 aa7.84□□□□□ -1.15
VMA21-203ENST00000477649 PBX4Q9BYU1 374 aa7.84□□□□□ -1.15
VMA21-203ENST00000477649 NUF2Q9BZD4 464 aa7.84□□□□□ -1.15
VMA21-203ENST00000477649 ZCCHC2Q9C0B9 1178 aaKnown RBP7.84□□□□□ -1.15
VMA21-203ENST00000477649 ZNF385DQ9H6B1 395 aa7.84□□□□□ -1.15
VMA21-203ENST00000477649 EPHX3Q9H6B9 360 aa7.84□□□□□ -1.15
VMA21-203ENST00000477649 CYP4F12Q9HCS2 524 aa7.84□□□□□ -1.15
VMA21-203ENST00000477649 CD274Q9NZQ7 290 aa7.84□□□□□ -1.15
VMA21-203ENST00000477649 ARMCX1Q9P291 453 aa7.84□□□□□ -1.15
VMA21-203ENST00000477649 PRPF19Q9UMS4 504 aaKnown RBP7.84□□□□□ -1.15
VMA21-203ENST00000477649 YBX2Q9Y2T7 364 aaKnown RBP7.84□□□□□ -1.15
VMA21-203ENST00000477649 OARD1Q9Y530 152 aa7.84□□□□□ -1.15
VMA21-203ENST00000477649 NUP210Q8TEM1 1887 aaPredicted RBP7.83□□□□□ -1.16
VMA21-203ENST00000477649 NEMP2A6NFY4 417 aa7.83□□□□□ -1.16
VMA21-203ENST00000477649 GRXCR1A8MXD5 290 aa7.83□□□□□ -1.16
VMA21-203ENST00000477649 TTC34A8MYJ7 566 aa7.83□□□□□ -1.16
VMA21-203ENST00000477649 UBXN8O00124 270 aa7.83□□□□□ -1.16
VMA21-203ENST00000477649 SDHDO14521 159 aa7.83□□□□□ -1.16
VMA21-203ENST00000477649 UBDO15205 165 aa7.83□□□□□ -1.16
VMA21-203ENST00000477649 DCXO43602 365 aa7.83□□□□□ -1.16
VMA21-203ENST00000477649 BNIP3LO60238 219 aa7.83□□□□□ -1.16
VMA21-203ENST00000477649 NUAK1O60285 661 aa7.83□□□□□ -1.16
VMA21-203ENST00000477649 CRCPO75575 148 aa7.83□□□□□ -1.16
VMA21-203ENST00000477649 CSPG5O95196 566 aa7.83□□□□□ -1.16
VMA21-203ENST00000477649 OTCP00480 354 aa7.83□□□□□ -1.16
VMA21-203ENST00000477649 C1SP09871 688 aa7.83□□□□□ -1.16
VMA21-203ENST00000477649 UROSP10746 265 aa7.83□□□□□ -1.16
VMA21-203ENST00000477649 COX4I1P13073 169 aa7.83□□□□□ -1.16
VMA21-203ENST00000477649 ATP1B2P14415 290 aaPredicted RBP7.83□□□□□ -1.16
VMA21-203ENST00000477649 TIMP2P16035 220 aa7.83□□□□□ -1.16
VMA21-203ENST00000477649 MSH3P20585 1137 aa7.83□□□□□ -1.16
VMA21-203ENST00000477649 LHCGRP22888 699 aa7.83□□□□□ -1.16
VMA21-203ENST00000477649 EEF1DP29692 281 aaKnown RBP7.83□□□□□ -1.16
VMA21-203ENST00000477649 GKP32189 559 aa7.83□□□□□ -1.16
VMA21-203ENST00000477649 MMP12P39900 470 aa7.83□□□□□ -1.16
VMA21-203ENST00000477649 MTHFRP42898 656 aa7.83□□□□□ -1.16
VMA21-203ENST00000477649 KCNC1P48547 511 aa7.83□□□□□ -1.16
VMA21-203ENST00000477649 HNMTP50135 292 aa7.83□□□□□ -1.16
VMA21-203ENST00000477649 AP1S2P56377 157 aa7.83□□□□□ -1.16
VMA21-203ENST00000477649 STX1BP61266 288 aa7.83□□□□□ -1.16
VMA21-203ENST00000477649 PLOD1Q02809 727 aaPredicted RBP7.83□□□□□ -1.16
VMA21-203ENST00000477649 CREB5Q02930 508 aa7.83□□□□□ -1.16
VMA21-203ENST00000477649 KDSRQ06136 332 aa7.83□□□□□ -1.16
VMA21-203ENST00000477649 BTKQ06187 659 aa7.83□□□□□ -1.16
VMA21-203ENST00000477649 STX5Q13190 355 aa7.83□□□□□ -1.16
VMA21-203ENST00000477649 RUNX3Q13761 415 aa7.83□□□□□ -1.16
VMA21-203ENST00000477649 CYLC2Q14093 348 aaPredicted RBP7.83□□□□□ -1.16
VMA21-203ENST00000477649 TGFBIQ15582 683 aa7.83□□□□□ -1.16
VMA21-203ENST00000477649 GSTA3Q16772 222 aa7.83□□□□□ -1.16
VMA21-203ENST00000477649 SMU1Q2TAY7 513 aa7.83□□□□□ -1.16
VMA21-203ENST00000477649 FNDC3BQ53EP0 1204 aaKnown RBP7.83□□□□□ -1.16
VMA21-203ENST00000477649 KANK2Q63ZY3 851 aa7.83□□□□□ -1.16
VMA21-203ENST00000477649 NXNQ6DKJ4 435 aa7.83□□□□□ -1.16
VMA21-203ENST00000477649 ATG14Q6ZNE5 492 aa7.83□□□□□ -1.16
VMA21-203ENST00000477649 MTSS1LQ765P7 747 aa7.83□□□□□ -1.16
VMA21-203ENST00000477649 SPATA19Q7Z5L4 167 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms