RNA–Protein interactions for RNA: ENST00000477561.5

HDAC6-221, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-221ENST00000477561 TRAPPC5Q8IUR0 188 aa8.16□□□□□ -1.1
HDAC6-221ENST00000477561 ZNF547Q8IVP9 402 aa8.16□□□□□ -1.1
HDAC6-221ENST00000477561 IFT20Q8IY31 132 aa8.16□□□□□ -1.1
HDAC6-221ENST00000477561 LSMEM2Q8N112 164 aa8.16□□□□□ -1.1
HDAC6-221ENST00000477561 FBXO39Q8N4B4 442 aa8.16□□□□□ -1.1
HDAC6-221ENST00000477561 PRELID2Q8N945 189 aa8.16□□□□□ -1.1
HDAC6-221ENST00000477561 OR13C4Q8NGS5 318 aa8.16□□□□□ -1.1
HDAC6-221ENST00000477561 WDR36Q8NI36 951 aaKnown RBP8.16□□□□□ -1.1
HDAC6-221ENST00000477561 ZNF398Q8TD17 642 aa8.16□□□□□ -1.1
HDAC6-221ENST00000477561 GRAMD1AQ96CP6 724 aa8.16□□□□□ -1.1
HDAC6-221ENST00000477561 PRR11Q96HE9 360 aaPredicted RBP8.16□□□□□ -1.1
HDAC6-221ENST00000477561 TTC25Q96NG3 672 aa8.16□□□□□ -1.1
HDAC6-221ENST00000477561 TMEM74Q96NL1 305 aa8.16□□□□□ -1.1
HDAC6-221ENST00000477561 SLC46A1Q96NT5 459 aa8.16□□□□□ -1.1
HDAC6-221ENST00000477561 VPS35Q96QK1 796 aa8.16□□□□□ -1.1
HDAC6-221ENST00000477561 SLC38A3Q99624 504 aa8.16□□□□□ -1.1
HDAC6-221ENST00000477561 NUDT22Q9BRQ3 303 aa8.16□□□□□ -1.1
HDAC6-221ENST00000477561 LRRC1Q9BTT6 524 aa8.16□□□□□ -1.1
HDAC6-221ENST00000477561 PARD6BQ9BYG5 372 aa8.16□□□□□ -1.1
HDAC6-221ENST00000477561 STRADBQ9C0K7 418 aa8.16□□□□□ -1.1
HDAC6-221ENST00000477561 DDX47Q9H0S4 455 aaKnown RBP8.16□□□□□ -1.1
HDAC6-221ENST00000477561 RAB17Q9H0T7 212 aa8.16□□□□□ -1.1
HDAC6-221ENST00000477561 FAM96AQ9H5X1 160 aa8.16□□□□□ -1.1
HDAC6-221ENST00000477561 ANKZF1Q9H8Y5 726 aa8.16□□□□□ -1.1
HDAC6-221ENST00000477561 ASCL3Q9NQ33 180 aa8.16□□□□□ -1.1
HDAC6-221ENST00000477561 WDR70Q9NW82 654 aa8.16□□□□□ -1.1
HDAC6-221ENST00000477561 KCNK4Q9NYG8 393 aa8.16□□□□□ -1.1
HDAC6-221ENST00000477561 SCHIP1Q9P0W5 487 aaPredicted RBP8.16□□□□□ -1.1
HDAC6-221ENST00000477561 PCYOX1Q9UHG3 505 aa8.16□□□□□ -1.1
HDAC6-221ENST00000477561 FKBPLQ9UIM3 349 aa8.16□□□□□ -1.1
HDAC6-221ENST00000477561 RAB21Q9UL25 225 aa8.16□□□□□ -1.1
HDAC6-221ENST00000477561 UTP11Q9Y3A2 253 aaKnown RBP8.16□□□□□ -1.1
HDAC6-221ENST00000477561 ANKRD11Q6UB99 2663 aaPredicted RBP8.16□□□□□ -1.1
HDAC6-221ENST00000477561 A0A087WV48 116 aa8.15□□□□□ -1.1
HDAC6-221ENST00000477561 IGHV1OR21-1A0A087WYE8 117 aa8.15□□□□□ -1.1
HDAC6-221ENST00000477561 PRAMEF33A0A0G2JMD5 474 aa8.15□□□□□ -1.1
HDAC6-221ENST00000477561 A6NCN8 305 aa8.15□□□□□ -1.1
HDAC6-221ENST00000477561 OR2AG2A6NM03 316 aa8.15□□□□□ -1.1
HDAC6-221ENST00000477561 PDZK1P1A8MUH7 402 aa8.15□□□□□ -1.1
HDAC6-221ENST00000477561 PLD2O14939 933 aa8.15□□□□□ -1.1
HDAC6-221ENST00000477561 CHUKO15111 745 aa8.15□□□□□ -1.1
HDAC6-221ENST00000477561 KMOO15229 486 aa8.15□□□□□ -1.1
HDAC6-221ENST00000477561 RRP8O43159 456 aaKnown RBP8.15□□□□□ -1.1
HDAC6-221ENST00000477561 RAD51CO43502 376 aa8.15□□□□□ -1.1
HDAC6-221ENST00000477561 LIASO43766 372 aa8.15□□□□□ -1.1
HDAC6-221ENST00000477561 VEGFDO43915 354 aa8.15□□□□□ -1.1
HDAC6-221ENST00000477561 CPNE6O95741 557 aa8.15□□□□□ -1.1
HDAC6-221ENST00000477561 GAS8O95995 478 aa8.15□□□□□ -1.1
HDAC6-221ENST00000477561 IFNB1P01574 187 aa8.15□□□□□ -1.1
HDAC6-221ENST00000477561 F3P13726 295 aa8.15□□□□□ -1.1
HDAC6-221ENST00000477561 HOXB3P14651 431 aaPredicted RBP8.15□□□□□ -1.1
HDAC6-221ENST00000477561 ZNF7P17097 686 aaPredicted RBP8.15□□□□□ -1.1
HDAC6-221ENST00000477561 ITIH1P19827 911 aa8.15□□□□□ -1.1
HDAC6-221ENST00000477561 RPL10P27635 214 aaKnown RBP8.15□□□□□ -1.1
HDAC6-221ENST00000477561 PBLDP30039 288 aaPredicted RBP8.15□□□□□ -1.1
HDAC6-221ENST00000477561 MAPK9P45984 424 aa8.15□□□□□ -1.1
HDAC6-221ENST00000477561 GPR3P46089 330 aa8.15□□□□□ -1.1
HDAC6-221ENST00000477561 CTSCP53634 463 aa8.15□□□□□ -1.1
HDAC6-221ENST00000477561 DRG2P55039 364 aaKnown RBP8.15□□□□□ -1.1
HDAC6-221ENST00000477561 HHEXQ03014 270 aa8.15□□□□□ -1.1
HDAC6-221ENST00000477561 CFHR1Q03591 330 aa8.15□□□□□ -1.1
HDAC6-221ENST00000477561 ZFP36L1Q07352 338 aaKnown RBP8.15□□□□□ -1.1
HDAC6-221ENST00000477561 MSLNQ13421 630 aaPredicted RBP8.15□□□□□ -1.1
HDAC6-221ENST00000477561 GTF2H3Q13889 308 aa8.15□□□□□ -1.1
HDAC6-221ENST00000477561 SEPT6Q14141 434 aa8.15□□□□□ -1.1
HDAC6-221ENST00000477561 NAA30Q147X3 362 aaPredicted RBP8.15□□□□□ -1.1
HDAC6-221ENST00000477561 NR1D2Q14995 579 aa8.15□□□□□ -1.1
HDAC6-221ENST00000477561 TAF1AQ15573 450 aaPredicted RBP8.15□□□□□ -1.1
HDAC6-221ENST00000477561 ZDHHC20Q5W0Z9 365 aa8.15□□□□□ -1.1
HDAC6-221ENST00000477561 DRICH1Q6PGQ1 229 aaPredicted RBP8.15□□□□□ -1.1
HDAC6-221ENST00000477561 CCDC137Q6PK04 289 aaKnown RBP8.15□□□□□ -1.1
HDAC6-221ENST00000477561 TMEM220Q6QAJ8 160 aa8.15□□□□□ -1.1
HDAC6-221ENST00000477561 DET1Q7L5Y6 550 aa8.15□□□□□ -1.1
HDAC6-221ENST00000477561 JAMLQ86YT9 394 aa8.15□□□□□ -1.1
HDAC6-221ENST00000477561 SLITRK4Q8IW52 837 aa8.15□□□□□ -1.1
HDAC6-221ENST00000477561 SFRP1Q8N474 314 aa8.15□□□□□ -1.1
HDAC6-221ENST00000477561 EFCAB3Q8N7B9 438 aa8.15□□□□□ -1.1
HDAC6-221ENST00000477561 BEND7Q8N7W2 519 aaPredicted RBP8.15□□□□□ -1.1
HDAC6-221ENST00000477561 RASGEF1AQ8N9B8 481 aa8.15□□□□□ -1.1
HDAC6-221ENST00000477561 RCBTB1Q8NDN9 531 aa8.15□□□□□ -1.1
HDAC6-221ENST00000477561 SNIP1Q8TAD8 396 aaKnown RBP8.15□□□□□ -1.1
HDAC6-221ENST00000477561 BRSK1Q8TDC3 778 aa8.15□□□□□ -1.1
HDAC6-221ENST00000477561 SLCO2A1Q92959 643 aa8.15□□□□□ -1.1
HDAC6-221ENST00000477561 LIN37Q96GY3 246 aaPredicted RBP8.15□□□□□ -1.1
HDAC6-221ENST00000477561 ZNF578Q96N58 590 aaPredicted RBP8.15□□□□□ -1.1
HDAC6-221ENST00000477561 TBC1D10AQ9BXI6 508 aa8.15□□□□□ -1.1
HDAC6-221ENST00000477561 ZMYND15Q9H091 742 aa8.15□□□□□ -1.1
HDAC6-221ENST00000477561 ASB8Q9H765 288 aa8.15□□□□□ -1.1
HDAC6-221ENST00000477561 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.15□□□□□ -1.1
HDAC6-221ENST00000477561 TMEM9Q9P0T7 183 aa8.15□□□□□ -1.1
HDAC6-221ENST00000477561 FAM8A1Q9UBU6 413 aa8.15□□□□□ -1.1
HDAC6-221ENST00000477561 PISDQ9UG56 409 aa8.15□□□□□ -1.1
HDAC6-221ENST00000477561 ZNF148Q9UQR1 794 aa8.15□□□□□ -1.1
HDAC6-221ENST00000477561 LOXL2Q9Y4K0 774 aa8.15□□□□□ -1.1
HDAC6-221ENST00000477561 PCDHGA8Q9Y5G5 932 aa8.15□□□□□ -1.1
HDAC6-221ENST00000477561 PKD1L2Q7Z442 2459 aa8.15□□□□□ -1.1
HDAC6-221ENST00000477561 APC2O95996 2303 aa8.15□□□□□ -1.1
HDAC6-221ENST00000477561 BPTFQ12830 3046 aa8.15□□□□□ -1.11
HDAC6-221ENST00000477561 ITPR1Q14643 2758 aa8.14□□□□□ -1.11
HDAC6-221ENST00000477561 ARHGEF17Q96PE2 2063 aaPredicted RBP8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms