RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 PHBP35232 272 aa15.13■□□□□ 0.01
SEC13-215ENST00000477547 GNPDA1P46926 289 aa15.13■□□□□ 0.01
SEC13-215ENST00000477547 PMS2P54278 862 aa15.13■□□□□ 0.01
SEC13-215ENST00000477547 IRX4P78413 519 aa15.13■□□□□ 0.01
SEC13-215ENST00000477547 MPP1Q00013 466 aa15.13■□□□□ 0.01
SEC13-215ENST00000477547 B4GALNT1Q00973 533 aa15.13■□□□□ 0.01
SEC13-215ENST00000477547 PLA2G4EQ3MJ16 856 aa15.13■□□□□ 0.01
SEC13-215ENST00000477547 ZNF542PQ5EBM4 170 aa15.13■□□□□ 0.01
SEC13-215ENST00000477547 IL27RAQ6UWB1 636 aa15.13■□□□□ 0.01
SEC13-215ENST00000477547 PACS1Q6VY07 963 aa15.13■□□□□ 0.01
SEC13-215ENST00000477547 C3orf62Q6ZUJ4 267 aa15.13■□□□□ 0.01
SEC13-215ENST00000477547 GALNT13Q8IUC8 556 aa15.13■□□□□ 0.01
SEC13-215ENST00000477547 CNTN4Q8IWV2 1026 aa15.13■□□□□ 0.01
SEC13-215ENST00000477547 RASGEF1AQ8N9B8 481 aa15.13■□□□□ 0.01
SEC13-215ENST00000477547 NAT14Q8WUY8 206 aa15.13■□□□□ 0.01
SEC13-215ENST00000477547 HEXDCQ8WVB3 486 aa15.13■□□□□ 0.01
SEC13-215ENST00000477547 TSACCQ96A04 125 aaPredicted RBP15.13■□□□□ 0.01
SEC13-215ENST00000477547 OR2M4Q96R27 311 aa15.13■□□□□ 0.01
SEC13-215ENST00000477547 GTPBP2Q9BX10 602 aaKnown RBP15.13■□□□□ 0.01
SEC13-215ENST00000477547 ZDHHC5Q9C0B5 715 aa15.13■□□□□ 0.01
SEC13-215ENST00000477547 APOBEC3BQ9UH17 382 aaKnown RBP15.13■□□□□ 0.01
SEC13-215ENST00000477547 RAB21Q9UL25 225 aa15.13■□□□□ 0.01
SEC13-215ENST00000477547 PNMA8BQ9ULN7 279 aaPredicted RBP15.13■□□□□ 0.01
SEC13-215ENST00000477547 SUFUQ9UMX1 484 aa15.13■□□□□ 0.01
SEC13-215ENST00000477547 CABIN1Q9Y6J0 2220 aa15.13■□□□□ 0.01
SEC13-215ENST00000477547 ARHGAP33O14559 1287 aa15.12■□□□□ 0.01
SEC13-215ENST00000477547 NUAK1O60285 661 aa15.12■□□□□ 0.01
SEC13-215ENST00000477547 OR1I1O60431 355 aa15.12■□□□□ 0.01
SEC13-215ENST00000477547 DNAJC6O75061 913 aa15.12■□□□□ 0.01
SEC13-215ENST00000477547 TUBBP07437 444 aa15.12■□□□□ 0.01
SEC13-215ENST00000477547 ZNF806P0C7X5 589 aa15.12■□□□□ 0.01
SEC13-215ENST00000477547 ZNF7P17097 686 aaPredicted RBP15.12■□□□□ 0.01
SEC13-215ENST00000477547 JUNDP17535 347 aa15.12■□□□□ 0.01
SEC13-215ENST00000477547 NSG1P42857 185 aa15.12■□□□□ 0.01
SEC13-215ENST00000477547 ARRB1P49407 418 aaPredicted RBP15.12■□□□□ 0.01
SEC13-215ENST00000477547 BLKP51451 505 aa15.12■□□□□ 0.01
SEC13-215ENST00000477547 CTSCP53634 463 aa15.12■□□□□ 0.01
SEC13-215ENST00000477547 TMEM115Q12893 351 aaPredicted RBP15.12■□□□□ 0.01
SEC13-215ENST00000477547 CTBP1Q13363 440 aa15.12■□□□□ 0.01
SEC13-215ENST00000477547 EFTUD2Q15029 972 aaKnown RBP eCLIP15.12■□□□□ 0.019e-9■■■■□ 23.5
SEC13-215ENST00000477547 ZNF423Q2M1K9 1284 aa15.12■□□□□ 0.01
SEC13-215ENST00000477547 ZNF449Q6P9G9 518 aa15.12■□□□□ 0.01
SEC13-215ENST00000477547 EMBQ6PCB8 327 aa15.12■□□□□ 0.01
SEC13-215ENST00000477547 TRMT10CQ7L0Y3 403 aaKnown RBP15.12■□□□□ 0.01
SEC13-215ENST00000477547 LRRTM4Q86VH4 590 aa15.12■□□□□ 0.01
SEC13-215ENST00000477547 OR2I1PQ8NGU4 316 aa15.12■□□□□ 0.01
SEC13-215ENST00000477547 FBF1Q8TES7 1133 aa15.12■□□□□ 0.01
SEC13-215ENST00000477547 AENQ8WTP8 325 aaKnown RBP15.12■□□□□ 0.01
SEC13-215ENST00000477547 LPGAT1Q92604 370 aa15.12■□□□□ 0.01
SEC13-215ENST00000477547 CDKL2Q92772 493 aa15.12■□□□□ 0.01
SEC13-215ENST00000477547 ELF4Q99607 663 aaPredicted RBP15.12■□□□□ 0.01
SEC13-215ENST00000477547 TXLNGYQ9BZA5 131 aa15.12■□□□□ 0.01
SEC13-215ENST00000477547 SLC13A1Q9BZW2 595 aa15.12■□□□□ 0.01
SEC13-215ENST00000477547 CLPBQ9H078 707 aa15.12■□□□□ 0.01
SEC13-215ENST00000477547 TCEAL2Q9H3H9 227 aaPredicted RBP15.12■□□□□ 0.01
SEC13-215ENST00000477547 RMI1Q9H9A7 625 aa15.12■□□□□ 0.01
SEC13-215ENST00000477547 ERVMER34-1Q9H9K5 563 aa15.12■□□□□ 0.01
SEC13-215ENST00000477547 FBXO6Q9NRD1 293 aaPredicted RBP15.12■□□□□ 0.01
SEC13-215ENST00000477547 INTS10Q9NVR2 710 aaKnown RBP15.12■□□□□ 0.01
SEC13-215ENST00000477547 MOCS1Q9NZB8 636 aa15.12■□□□□ 0.01
SEC13-215ENST00000477547 FBXO5Q9UKT4 447 aa15.12■□□□□ 0.01
SEC13-215ENST00000477547 ZMIZ1Q9ULJ6 1067 aa15.12■□□□□ 0.01
SEC13-215ENST00000477547 VPS9D1Q9Y2B5 631 aa15.12■□□□□ 0.01
SEC13-215ENST00000477547 PRKAB1Q9Y478 270 aa15.12■□□□□ 0.01
SEC13-215ENST00000477547 PCYT1BQ9Y5K3 369 aaPredicted RBP15.12■□□□□ 0.01
SEC13-215ENST00000477547 DGKBQ9Y6T7 804 aa15.12■□□□□ 0.01
SEC13-215ENST00000477547 CEP295Q9C0D2 2601 aa15.12■□□□□ 0.01
SEC13-215ENST00000477547 FAM159BA6NKW6 160 aa15.11■□□□□ 0.01
SEC13-215ENST00000477547 PRMT5O14744 637 aaPredicted RBP15.11■□□□□ 0.01
SEC13-215ENST00000477547 GRID2O43424 1007 aa15.11■□□□□ 0.01
SEC13-215ENST00000477547 CSF2P04141 144 aa15.11■□□□□ 0.01
SEC13-215ENST00000477547 ATP1B2P14415 290 aaPredicted RBP15.11■□□□□ 0.01
SEC13-215ENST00000477547 PBLDP30039 288 aaPredicted RBP15.11■□□□□ 0.01
SEC13-215ENST00000477547 CCT8P50990 548 aa15.11■□□□□ 0.01
SEC13-215ENST00000477547 HK3P52790 923 aa15.11■□□□□ 0.01
SEC13-215ENST00000477547 ATXN3P54252 364 aaPredicted RBP15.11■□□□□ 0.01
SEC13-215ENST00000477547 EIF3BP55884 814 aaKnown RBP15.11■□□□□ 0.01
SEC13-215ENST00000477547 IL9RQ01113 521 aa15.11■□□□□ 0.01
SEC13-215ENST00000477547 TCEA2Q15560 299 aa15.11■□□□□ 0.01
SEC13-215ENST00000477547 HLA-BQ31612 363 aa15.11■□□□□ 0.01
SEC13-215ENST00000477547 PRAMEF14Q5SWL7 426 aa15.11■□□□□ 0.01
SEC13-215ENST00000477547 KIAA0408Q6ZU52 694 aa15.11■□□□□ 0.01
SEC13-215ENST00000477547 MINDY1Q8N5J2 469 aa15.11■□□□□ 0.01
SEC13-215ENST00000477547 C2CD4AQ8NCU7 369 aaPredicted RBP15.11■□□□□ 0.01
SEC13-215ENST00000477547 SCG3Q8WXD2 468 aaKnown RBP15.11■□□□□ 0.01
SEC13-215ENST00000477547 SCARF2Q96GP6 870 aaPredicted RBP15.11■□□□□ 0.01
SEC13-215ENST00000477547 TCF12Q99081 682 aa15.11■□□□□ 0.01
SEC13-215ENST00000477547 EDEM2Q9BV94 578 aa15.11■□□□□ 0.01
SEC13-215ENST00000477547 LRRC61Q9BV99 259 aa15.11■□□□□ 0.01
SEC13-215ENST00000477547 GAREM1Q9H706 876 aa15.11■□□□□ 0.01
SEC13-215ENST00000477547 CAAP1Q9H8G2 361 aa15.11■□□□□ 0.01
SEC13-215ENST00000477547 SMYD2Q9NRG4 433 aa15.11■□□□□ 0.01
SEC13-215ENST00000477547 KLF15Q9UIH9 416 aa15.11■□□□□ 0.01
SEC13-215ENST00000477547 GNPTGQ9UJJ9 305 aa15.11■□□□□ 0.01
SEC13-215ENST00000477547 ZFYVE26Q68DK2 2539 aa15.1■□□□□ 0.01
SEC13-215ENST00000477547 CHUKO15111 745 aa15.1■□□□□ 0.01
SEC13-215ENST00000477547 YKT6O15498 198 aa15.1■□□□□ 0.01
SEC13-215ENST00000477547 RIPK2O43353 540 aa15.1■□□□□ 0.01
SEC13-215ENST00000477547 SDC3O75056 442 aa15.1■□□□□ 0.01
SEC13-215ENST00000477547 PIAS1O75925 651 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms