RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 CST9Q5W186 159 aa10.91□□□□□ -0.66
COL27A1-204ENST00000477421 GTF2H2CQ6P1K8 395 aa10.91□□□□□ -0.66
COL27A1-204ENST00000477421 CRTC3Q6UUV7 619 aa10.91□□□□□ -0.66
COL27A1-204ENST00000477421 CYS1Q717R9 158 aa10.91□□□□□ -0.66
COL27A1-204ENST00000477421 GALNT5Q7Z7M9 940 aa10.91□□□□□ -0.66
COL27A1-204ENST00000477421 NRG4Q8WWG1 115 aa10.91□□□□□ -0.66
COL27A1-204ENST00000477421 OSBPL11Q9BXB4 747 aa10.91□□□□□ -0.66
COL27A1-204ENST00000477421 EBPLQ9BY08 206 aa10.91□□□□□ -0.66
COL27A1-204ENST00000477421 YIPF1Q9Y548 306 aa10.91□□□□□ -0.66
COL27A1-204ENST00000477421 MCM3APO60318 1980 aa10.91□□□□□ -0.66
COL27A1-204ENST00000477421 GALTP07902 379 aa10.91□□□□□ -0.66
COL27A1-204ENST00000477421 FAM163BP0C2L3 166 aa10.91□□□□□ -0.66
COL27A1-204ENST00000477421 CRATP43155 626 aa10.91□□□□□ -0.66
COL27A1-204ENST00000477421 NEK2P51955 445 aa10.91□□□□□ -0.66
COL27A1-204ENST00000477421 TAF1AQ15573 450 aaPredicted RBP10.91□□□□□ -0.66
COL27A1-204ENST00000477421 ADRM1Q16186 407 aa10.91□□□□□ -0.66
COL27A1-204ENST00000477421 B3GNT6Q6ZMB0 384 aa10.91□□□□□ -0.66
COL27A1-204ENST00000477421 ARHGAP12Q8IWW6 846 aa10.91□□□□□ -0.66
COL27A1-204ENST00000477421 PGBD3Q8N328 593 aa10.91□□□□□ -0.66
COL27A1-204ENST00000477421 PHF12Q96QT6 1004 aa10.91□□□□□ -0.66
COL27A1-204ENST00000477421 AARSD1Q9BTE6 412 aaKnown RBP10.91□□□□□ -0.66
COL27A1-204ENST00000477421 TMEM248Q9NWD8 314 aa10.91□□□□□ -0.66
COL27A1-204ENST00000477421 CACNA2D2Q9NY47 1150 aa10.91□□□□□ -0.66
COL27A1-204ENST00000477421 DYRK1BQ9Y463 629 aa10.91□□□□□ -0.66
COL27A1-204ENST00000477421 A0A1W2PQ45 241 aaPredicted RBP10.91□□□□□ -0.66
COL27A1-204ENST00000477421 A0A1W2PQY0 241 aa10.91□□□□□ -0.66
COL27A1-204ENST00000477421 ARVCFO00192 962 aa10.91□□□□□ -0.66
COL27A1-204ENST00000477421 AGRPO00253 132 aa10.91□□□□□ -0.66
COL27A1-204ENST00000477421 HNRNPRO43390 633 aaKnown RBP10.91□□□□□ -0.66
COL27A1-204ENST00000477421 COCHO43405 550 aa10.91□□□□□ -0.66
COL27A1-204ENST00000477421 MAN1A2O60476 641 aa10.91□□□□□ -0.66
COL27A1-204ENST00000477421 RNASEH1O60930 286 aaKnown RBP10.91□□□□□ -0.66
COL27A1-204ENST00000477421 S1PR4O95977 384 aa10.91□□□□□ -0.66
COL27A1-204ENST00000477421 ZNF37AP17032 561 aaPredicted RBP10.91□□□□□ -0.66
COL27A1-204ENST00000477421 YAP1P46937 504 aaKnown RBP10.91□□□□□ -0.66
COL27A1-204ENST00000477421 C1QTNF8P60827 252 aa10.91□□□□□ -0.66
COL27A1-204ENST00000477421 ROR2Q01974 943 aaKnown RBP10.91□□□□□ -0.66
COL27A1-204ENST00000477421 CACNG1Q06432 222 aa10.91□□□□□ -0.66
COL27A1-204ENST00000477421 ATP1A4Q13733 1029 aa10.91□□□□□ -0.66
COL27A1-204ENST00000477421 COL9A2Q14055 689 aaPredicted RBP10.91□□□□□ -0.66
COL27A1-204ENST00000477421 CCNIQ14094 377 aa10.91□□□□□ -0.66
COL27A1-204ENST00000477421 PTPRRQ15256 657 aa10.91□□□□□ -0.66
COL27A1-204ENST00000477421 FNDC3BQ53EP0 1204 aaKnown RBP10.91□□□□□ -0.66
COL27A1-204ENST00000477421 TMEM26Q6ZUK4 368 aa10.91□□□□□ -0.66
COL27A1-204ENST00000477421 RNF168Q8IYW5 571 aaPredicted RBP10.91□□□□□ -0.66
COL27A1-204ENST00000477421 UMODL1-AS1Q8N2C9 162 aa10.91□□□□□ -0.66
COL27A1-204ENST00000477421 MTERF1Q99551 399 aaKnown RBP10.91□□□□□ -0.66
COL27A1-204ENST00000477421 WRAP53Q9BUR4 548 aaKnown RBP10.91□□□□□ -0.66
COL27A1-204ENST00000477421 BRD9Q9H8M2 597 aa10.91□□□□□ -0.66
COL27A1-204ENST00000477421 TRPC4Q9UBN4 977 aa10.91□□□□□ -0.66
COL27A1-204ENST00000477421 C2orf78A6NCI8 922 aa10.9□□□□□ -0.66
COL27A1-204ENST00000477421 SCAMP1O15126 338 aa10.9□□□□□ -0.66
COL27A1-204ENST00000477421 PRAMEF11O60813 436 aa10.9□□□□□ -0.66
COL27A1-204ENST00000477421 FKTNO75072 461 aa10.9□□□□□ -0.66
COL27A1-204ENST00000477421 UROSP10746 265 aa10.9□□□□□ -0.66
COL27A1-204ENST00000477421 ALOX15P16050 662 aaPredicted RBP10.9□□□□□ -0.66
COL27A1-204ENST00000477421 MAGEA6P43360 314 aa10.9□□□□□ -0.66
COL27A1-204ENST00000477421 NAE1Q13564 534 aa10.9□□□□□ -0.66
COL27A1-204ENST00000477421 SIM2Q14190 667 aaPredicted RBP10.9□□□□□ -0.66
COL27A1-204ENST00000477421 CBX2Q14781 532 aaPredicted RBP10.9□□□□□ -0.66
COL27A1-204ENST00000477421 TECRLQ5HYJ1 363 aa10.9□□□□□ -0.66
COL27A1-204ENST00000477421 CLLU1OSQ5K130 101 aa10.9□□□□□ -0.66
COL27A1-204ENST00000477421 LINC01465Q8N7H1 131 aa10.9□□□□□ -0.66
COL27A1-204ENST00000477421 ANKLE1Q8NAG6 615 aa10.9□□□□□ -0.66
COL27A1-204ENST00000477421 IGFLR1Q9H665 355 aa10.9□□□□□ -0.66
COL27A1-204ENST00000477421 LRTM1Q9HBL6 345 aa10.9□□□□□ -0.66
COL27A1-204ENST00000477421 MKS1Q9NXB0 559 aa10.9□□□□□ -0.66
COL27A1-204ENST00000477421 OAZ3Q9UMX2 235 aa10.9□□□□□ -0.66
COL27A1-204ENST00000477421 SNX6Q9UNH7 406 aa10.9□□□□□ -0.66
COL27A1-204ENST00000477421 MRPS23Q9Y3D9 190 aaKnown RBP10.9□□□□□ -0.66
COL27A1-204ENST00000477421 EI24O14681 340 aa10.9□□□□□ -0.66
COL27A1-204ENST00000477421 FFAR2O15552 330 aa10.9□□□□□ -0.66
COL27A1-204ENST00000477421 CDK14O94921 469 aa10.9□□□□□ -0.66
COL27A1-204ENST00000477421 OR6B1O95007 311 aa10.9□□□□□ -0.66
COL27A1-204ENST00000477421 ESR1P03372 595 aa10.9□□□□□ -0.66
COL27A1-204ENST00000477421 OGNP20774 298 aaKnown RBP10.9□□□□□ -0.66
COL27A1-204ENST00000477421 GABRB3P28472 473 aa10.9□□□□□ -0.66
COL27A1-204ENST00000477421 ADSLP30566 484 aaPredicted RBP10.9□□□□□ -0.66
COL27A1-204ENST00000477421 PTGER3P43115 390 aa10.9□□□□□ -0.66
COL27A1-204ENST00000477421 TNK2Q07912 1038 aa10.9□□□□□ -0.66
COL27A1-204ENST00000477421 BNIP2Q12982 314 aa10.9□□□□□ -0.66
COL27A1-204ENST00000477421 CCDC85BQ15834 202 aaPredicted RBP10.9□□□□□ -0.66
COL27A1-204ENST00000477421 PSAPL1Q6NUJ1 521 aa10.9□□□□□ -0.66
COL27A1-204ENST00000477421 SLC2A7Q6PXP3 512 aa10.9□□□□□ -0.66
COL27A1-204ENST00000477421 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.9□□□□□ -0.66
COL27A1-204ENST00000477421 DGCR14Q96DF8 476 aaKnown RBP10.9□□□□□ -0.66
COL27A1-204ENST00000477421 COL24A1Q17RW2 1714 aa10.9□□□□□ -0.67
COL27A1-204ENST00000477421 ANXA6P08133 673 aa10.9□□□□□ -0.67
COL27A1-204ENST00000477421 GNAZP19086 355 aa10.9□□□□□ -0.67
COL27A1-204ENST00000477421 CTNNB1P35222 781 aa10.9□□□□□ -0.67
COL27A1-204ENST00000477421 WASP42768 502 aa10.9□□□□□ -0.67
COL27A1-204ENST00000477421 MS4A2Q01362 244 aa10.9□□□□□ -0.67
COL27A1-204ENST00000477421 CHRNA6Q15825 494 aa10.9□□□□□ -0.67
COL27A1-204ENST00000477421 ZNF678Q5SXM1 525 aa10.9□□□□□ -0.67
COL27A1-204ENST00000477421 RAET1GQ6H3X3 334 aa10.9□□□□□ -0.67
COL27A1-204ENST00000477421 ERAP2Q6P179 960 aa10.9□□□□□ -0.67
COL27A1-204ENST00000477421 ZBTB2Q8N680 514 aa10.9□□□□□ -0.67
COL27A1-204ENST00000477421 KDM1BQ8NB78 822 aa10.9□□□□□ -0.67
COL27A1-204ENST00000477421 LZICQ8WZA0 190 aa10.9□□□□□ -0.67
COL27A1-204ENST00000477421 PNPLA3Q9NST1 481 aa10.9□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms