RNA–Protein interactions for RNA: ENST00000477182.5

LSM2-212, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-212ENST00000477182 LYSMD1Q96S90 227 aa11.46□□□□□ -0.57
LSM2-212ENST00000477182 WDR83Q9BRX9 315 aaKnown RBP11.46□□□□□ -0.57
LSM2-212ENST00000477182 TRIM56Q9BRZ2 755 aaKnown RBP11.46□□□□□ -0.57
LSM2-212ENST00000477182 WRAP53Q9BUR4 548 aaKnown RBP11.46□□□□□ -0.57
LSM2-212ENST00000477182 GPR63Q9BZJ6 419 aa11.46□□□□□ -0.57
LSM2-212ENST00000477182 STRADBQ9C0K7 418 aa11.46□□□□□ -0.57
LSM2-212ENST00000477182 IL22Q9GZX6 179 aa11.46□□□□□ -0.57
LSM2-212ENST00000477182 PREBQ9HCU5 417 aa11.46□□□□□ -0.57
LSM2-212ENST00000477182 DNAJC28Q9NX36 388 aa11.46□□□□□ -0.57
LSM2-212ENST00000477182 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.46□□□□□ -0.57
LSM2-212ENST00000477182 HACD3Q9P035 362 aa11.46□□□□□ -0.57
LSM2-212ENST00000477182 SAMD15Q9P1V8 674 aa11.46□□□□□ -0.57
LSM2-212ENST00000477182 RAB21Q9UL25 225 aa11.46□□□□□ -0.57
LSM2-212ENST00000477182 CHMP2BQ9UQN3 213 aa11.46□□□□□ -0.57
LSM2-212ENST00000477182 CA5BQ9Y2D0 317 aa11.46□□□□□ -0.57
LSM2-212ENST00000477182 TCAF1Q9Y4C2 921 aa11.46□□□□□ -0.57
LSM2-212ENST00000477182 KCTD3Q9Y597 815 aa11.46□□□□□ -0.57
LSM2-212ENST00000477182 ARL5AQ9Y689 179 aa11.46□□□□□ -0.57
LSM2-212ENST00000477182 HEATR9A2RTY3 570 aa11.45□□□□□ -0.58
LSM2-212ENST00000477182 SLC31A1O15431 190 aa11.45□□□□□ -0.58
LSM2-212ENST00000477182 LDB2O43679 373 aa11.45□□□□□ -0.58
LSM2-212ENST00000477182 AP1G1O43747 822 aa11.45□□□□□ -0.58
LSM2-212ENST00000477182 PCDH8O95206 1070 aa11.45□□□□□ -0.58
LSM2-212ENST00000477182 CRTAMO95727 393 aa11.45□□□□□ -0.58
LSM2-212ENST00000477182 TUBBP07437 444 aa11.45□□□□□ -0.58
LSM2-212ENST00000477182 ADRA1DP25100 572 aa11.45□□□□□ -0.58
LSM2-212ENST00000477182 UGT1A5P35504 534 aa11.45□□□□□ -0.58
LSM2-212ENST00000477182 MAGEA4P43358 317 aa11.45□□□□□ -0.58
LSM2-212ENST00000477182 CBLBQ13191 982 aa11.45□□□□□ -0.58
LSM2-212ENST00000477182 SRSF6Q13247 344 aaKnown RBP11.45□□□□□ -0.58
LSM2-212ENST00000477182 PTPRCAPQ14761 206 aa11.45□□□□□ -0.58
LSM2-212ENST00000477182 TAF1AQ15573 450 aaPredicted RBP11.45□□□□□ -0.58
LSM2-212ENST00000477182 CNGA3Q16281 694 aa11.45□□□□□ -0.58
LSM2-212ENST00000477182 TMEM52BQ4KMG9 183 aa11.45□□□□□ -0.58
LSM2-212ENST00000477182 PCID2Q5JVF3 399 aa11.45□□□□□ -0.58
LSM2-212ENST00000477182 NEK5Q6P3R8 708 aa11.45□□□□□ -0.58
LSM2-212ENST00000477182 BORAQ6PGQ7 559 aa11.45□□□□□ -0.58
LSM2-212ENST00000477182 CES3Q6UWW8 571 aa11.45□□□□□ -0.58
LSM2-212ENST00000477182 ZBED8Q8IZ13 594 aa11.45□□□□□ -0.58
LSM2-212ENST00000477182 ZNF548Q8NEK5 533 aaPredicted RBP11.45□□□□□ -0.58
LSM2-212ENST00000477182 OR13H1Q8NG92 308 aa11.45□□□□□ -0.58
LSM2-212ENST00000477182 STAMBPL1Q96FJ0 436 aa11.45□□□□□ -0.58
LSM2-212ENST00000477182 CFAP36Q96G28 342 aa11.45□□□□□ -0.58
LSM2-212ENST00000477182 RANBP9Q96S59 729 aa11.45□□□□□ -0.58
LSM2-212ENST00000477182 SRPK1Q96SB4 655 aaKnown RBP11.45□□□□□ -0.58
LSM2-212ENST00000477182 EBNA1BP2Q99848 306 aaKnown RBP11.45□□□□□ -0.58
LSM2-212ENST00000477182 PHACTR1Q9C0D0 580 aa11.45□□□□□ -0.58
LSM2-212ENST00000477182 TRABDQ9H4I3 376 aa11.45□□□□□ -0.58
LSM2-212ENST00000477182 ZFYVE1Q9HBF4 777 aa11.45□□□□□ -0.58
LSM2-212ENST00000477182 CHRAC1Q9NRG0 131 aa11.45□□□□□ -0.58
LSM2-212ENST00000477182 SOX13Q9UN79 622 aa11.45□□□□□ -0.58
LSM2-212ENST00000477182 TEX264Q9Y6I9 313 aa11.45□□□□□ -0.58
LSM2-212ENST00000477182 MROH6A6NGR9 719 aa11.44□□□□□ -0.58
LSM2-212ENST00000477182 C2orf81A6NN90 581 aa11.44□□□□□ -0.58
LSM2-212ENST00000477182 TPP1O14773 563 aa11.44□□□□□ -0.58
LSM2-212ENST00000477182 TSPAN6O43657 245 aa11.44□□□□□ -0.58
LSM2-212ENST00000477182 MMP20O60882 483 aa11.44□□□□□ -0.58
LSM2-212ENST00000477182 ELFN1P0C7U0 828 aa11.44□□□□□ -0.58
LSM2-212ENST00000477182 ZNF30P17039 623 aa11.44□□□□□ -0.58
LSM2-212ENST00000477182 LPOP22079 712 aaPredicted RBP11.44□□□□□ -0.58
LSM2-212ENST00000477182 HNRNPA2B1P22626 353 aaKnown RBP11.44□□□□□ -0.58
LSM2-212ENST00000477182 NMBRP28336 390 aa11.44□□□□□ -0.58
LSM2-212ENST00000477182 LIG3P49916 1009 aa11.44□□□□□ -0.58
LSM2-212ENST00000477182 ZNF140P52738 457 aaPredicted RBP11.44□□□□□ -0.58
LSM2-212ENST00000477182 STC1P52823 247 aa11.44□□□□□ -0.58
LSM2-212ENST00000477182 PDX1P52945 283 aa11.44□□□□□ -0.58
LSM2-212ENST00000477182 TMPRSS15P98073 1019 aa11.44□□□□□ -0.58
LSM2-212ENST00000477182 TSTD2Q5T7W7 516 aa11.44□□□□□ -0.58
LSM2-212ENST00000477182 LIPIQ6XZB0 460 aa11.44□□□□□ -0.58
LSM2-212ENST00000477182 RFLNAQ6ZTI6 216 aa11.44□□□□□ -0.58
LSM2-212ENST00000477182 CEP128Q6ZU80 1094 aa11.44□□□□□ -0.58
LSM2-212ENST00000477182 FBXO36Q8NEA4 188 aa11.44□□□□□ -0.58
LSM2-212ENST00000477182 OR4K2Q8NGD2 314 aa11.44□□□□□ -0.58
LSM2-212ENST00000477182 CXorf40AQ8TE69 158 aa11.44□□□□□ -0.58
LSM2-212ENST00000477182 AENQ8WTP8 325 aaKnown RBP11.44□□□□□ -0.58
LSM2-212ENST00000477182 PYROXD1Q8WU10 500 aa11.44□□□□□ -0.58
LSM2-212ENST00000477182 PTCD2Q8WV60 388 aaKnown RBP11.44□□□□□ -0.58
LSM2-212ENST00000477182 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.44□□□□□ -0.58
LSM2-212ENST00000477182 EID2BQ96D98 161 aa11.44□□□□□ -0.58
LSM2-212ENST00000477182 LRRC39Q96DD0 335 aa11.44□□□□□ -0.58
LSM2-212ENST00000477182 DNAJC1Q96KC8 554 aaKnown RBP11.44□□□□□ -0.58
LSM2-212ENST00000477182 C9orf72Q96LT7 481 aa11.44□□□□□ -0.58
LSM2-212ENST00000477182 ZNF778Q96MU6 729 aa11.44□□□□□ -0.58
LSM2-212ENST00000477182 MYOCQ99972 504 aa11.44□□□□□ -0.58
LSM2-212ENST00000477182 KIFC1Q9BW19 673 aa11.44□□□□□ -0.58
LSM2-212ENST00000477182 TSPYL1Q9H0U9 437 aa11.44□□□□□ -0.58
LSM2-212ENST00000477182 MRM3Q9HC36 420 aaKnown RBP11.44□□□□□ -0.58
LSM2-212ENST00000477182 BPIFA1Q9NP55 256 aa11.44□□□□□ -0.58
LSM2-212ENST00000477182 SLC2A6Q9UGQ3 507 aa11.44□□□□□ -0.58
LSM2-212ENST00000477182 ZC3H7BQ9UGR2 993 aaKnown RBP11.44□□□□□ -0.58
LSM2-212ENST00000477182 COQ6Q9Y2Z9 468 aa11.44□□□□□ -0.58
LSM2-212ENST00000477182 ZFC3H1O60293 1989 aaKnown RBP11.44□□□□□ -0.58
LSM2-212ENST00000477182 FBN2P35556 2912 aa11.43□□□□□ -0.58
LSM2-212ENST00000477182 UQCRHLA0A096LP55 91 aa11.43□□□□□ -0.58
LSM2-212ENST00000477182 FAM237BA0A1B0GVD1 139 aa11.43□□□□□ -0.58
LSM2-212ENST00000477182 A6NNZ2 444 aa11.43□□□□□ -0.58
LSM2-212ENST00000477182 CCL22O00626 93 aa11.43□□□□□ -0.58
LSM2-212ENST00000477182 STX7O15400 261 aaKnown RBP11.43□□□□□ -0.58
LSM2-212ENST00000477182 AQP9O43315 295 aa11.43□□□□□ -0.58
LSM2-212ENST00000477182 CSF2P04141 144 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms