RNA–Protein interactions for RNA: ENST00000477063.5

SEC22A-205, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 5

Gene SEC22A, Length 759 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-205ENST00000477063 SOX9P48436 509 aa13.11□□□□□ -0.31
SEC22A-205ENST00000477063 RPS14P62263 151 aaKnown RBP13.11□□□□□ -0.31
SEC22A-205ENST00000477063 HERVK_113P63132 956 aa13.11□□□□□ -0.31
SEC22A-205ENST00000477063 CNTN1Q12860 1018 aa13.11□□□□□ -0.31
SEC22A-205ENST00000477063 SP140Q13342 867 aa13.11□□□□□ -0.31
SEC22A-205ENST00000477063 TDGQ13569 410 aa13.11□□□□□ -0.31
SEC22A-205ENST00000477063 GBX1Q14549 363 aa13.11□□□□□ -0.31
SEC22A-205ENST00000477063 AGBL4Q5VU57 503 aa13.11□□□□□ -0.31
SEC22A-205ENST00000477063 FAM91A1Q658Y4 838 aa13.11□□□□□ -0.31
SEC22A-205ENST00000477063 NAIF1Q69YI7 327 aaPredicted RBP13.11□□□□□ -0.31
SEC22A-205ENST00000477063 ADAMTSL4Q6UY14 1074 aa13.11□□□□□ -0.31
SEC22A-205ENST00000477063 TRIM67Q6ZTA4 783 aa13.11□□□□□ -0.31
SEC22A-205ENST00000477063 CCDC121Q6ZUS5 278 aa13.11□□□□□ -0.31
SEC22A-205ENST00000477063 SFTPA1Q8IWL2 248 aa13.11□□□□□ -0.31
SEC22A-205ENST00000477063 IL17RCQ8NAC3 791 aa13.11□□□□□ -0.31
SEC22A-205ENST00000477063 SIDT2Q8NBJ9 832 aaKnown RBP13.11□□□□□ -0.31
SEC22A-205ENST00000477063 TXNDC5Q8NBS9 432 aaKnown RBP13.11□□□□□ -0.31
SEC22A-205ENST00000477063 GIMAP7Q8NHV1 300 aa13.11□□□□□ -0.31
SEC22A-205ENST00000477063 EZH1Q92800 747 aaPredicted RBP13.11□□□□□ -0.31
SEC22A-205ENST00000477063 PTERQ96BW5 349 aa13.11□□□□□ -0.31
SEC22A-205ENST00000477063 LINGO1Q96FE5 620 aa13.11□□□□□ -0.31
SEC22A-205ENST00000477063 SORT1Q99523 831 aa13.11□□□□□ -0.31
SEC22A-205ENST00000477063 TUBB6Q9BUF5 446 aa13.11□□□□□ -0.31
SEC22A-205ENST00000477063 BOCQ9BWV1 1114 aa13.11□□□□□ -0.31
SEC22A-205ENST00000477063 C1QTNF7Q9BXJ2 289 aa13.11□□□□□ -0.31
SEC22A-205ENST00000477063 ERVK-6Q9BXR3 956 aa13.11□□□□□ -0.31
SEC22A-205ENST00000477063 NPHS2Q9NP85 383 aa13.11□□□□□ -0.31
SEC22A-205ENST00000477063 DNAJC28Q9NX36 388 aa13.11□□□□□ -0.31
SEC22A-205ENST00000477063 LRRK1Q38SD2 2015 aa13.11□□□□□ -0.31
SEC22A-205ENST00000477063 A0A0C4DFX4 3053 aa13.11□□□□□ -0.31
SEC22A-205ENST00000477063 RANBP2P49792 3224 aaKnown RBP13.11□□□□□ -0.31
SEC22A-205ENST00000477063 BRWD1Q9NSI6 2320 aa13.1□□□□□ -0.31
SEC22A-205ENST00000477063 RAD51BO15315 384 aa13.1□□□□□ -0.31
SEC22A-205ENST00000477063 MID1O15344 667 aa13.1□□□□□ -0.31
SEC22A-205ENST00000477063 NUAK1O60285 661 aa13.1□□□□□ -0.31
SEC22A-205ENST00000477063 HNRNPCL1O60812 293 aaKnown RBP13.1□□□□□ -0.31
SEC22A-205ENST00000477063 ATP5HO75947 161 aa13.1□□□□□ -0.31
SEC22A-205ENST00000477063 TM7SF2O76062 418 aa13.1□□□□□ -0.31
SEC22A-205ENST00000477063 C8GP07360 202 aa13.1□□□□□ -0.31
SEC22A-205ENST00000477063 HOXB2P14652 356 aa13.1□□□□□ -0.31
SEC22A-205ENST00000477063 AOAHP28039 575 aa13.1□□□□□ -0.31
SEC22A-205ENST00000477063 PRLHRP49683 370 aa13.1□□□□□ -0.31
SEC22A-205ENST00000477063 RPL14P50914 215 aaKnown RBP13.1□□□□□ -0.31
SEC22A-205ENST00000477063 COPAP53621 1224 aa13.1□□□□□ -0.31
SEC22A-205ENST00000477063 NAGLUP54802 743 aa13.1□□□□□ -0.31
SEC22A-205ENST00000477063 ALDH18A1P54886 795 aaKnown RBP13.1□□□□□ -0.31
SEC22A-205ENST00000477063 CDKL1Q00532 357 aa13.1□□□□□ -0.31
SEC22A-205ENST00000477063 B4GALNT1Q00973 533 aa13.1□□□□□ -0.31
SEC22A-205ENST00000477063 PRKCQQ04759 706 aa13.1□□□□□ -0.31
SEC22A-205ENST00000477063 PON2Q15165 354 aa13.1□□□□□ -0.31
SEC22A-205ENST00000477063 TBCCQ15814 346 aa13.1□□□□□ -0.31
SEC22A-205ENST00000477063 BCL7AQ4VC05 210 aa13.1□□□□□ -0.31
SEC22A-205ENST00000477063 LACTB2Q53H82 288 aaPredicted RBP13.1□□□□□ -0.31
SEC22A-205ENST00000477063 LRRC73Q5JTD7 316 aa13.1□□□□□ -0.31
SEC22A-205ENST00000477063 ZCCHC23Q6ZST2 131 aa13.1□□□□□ -0.31
SEC22A-205ENST00000477063 FRMD7Q6ZUT3 714 aa13.1□□□□□ -0.31
SEC22A-205ENST00000477063 CPNE9Q8IYJ1 553 aa13.1□□□□□ -0.31
SEC22A-205ENST00000477063 TCAIMQ8N3R3 496 aa13.1□□□□□ -0.31
SEC22A-205ENST00000477063 FBXO39Q8N4B4 442 aa13.1□□□□□ -0.31
SEC22A-205ENST00000477063 ASZ1Q8WWH4 475 aa13.1□□□□□ -0.31
SEC22A-205ENST00000477063 CCT6BQ92526 530 aa13.1□□□□□ -0.31
SEC22A-205ENST00000477063 SCAMP4Q969E2 229 aa13.1□□□□□ -0.31
SEC22A-205ENST00000477063 FUBP1Q96AE4 644 aaKnown RBP13.1□□□□□ -0.31
SEC22A-205ENST00000477063 LINC00615Q96LM1 132 aaPredicted RBP13.1□□□□□ -0.31
SEC22A-205ENST00000477063 LRRC37BQ96QE4 947 aa13.1□□□□□ -0.31
SEC22A-205ENST00000477063 PREBQ9HCU5 417 aa13.1□□□□□ -0.31
SEC22A-205ENST00000477063 ZDHHC4Q9NPG8 344 aa13.1□□□□□ -0.31
SEC22A-205ENST00000477063 HEBP1Q9NRV9 189 aa13.1□□□□□ -0.31
SEC22A-205ENST00000477063 LIMD1Q9UGP4 676 aa13.1□□□□□ -0.31
SEC22A-205ENST00000477063 GPR34Q9UPC5 381 aa13.1□□□□□ -0.31
SEC22A-205ENST00000477063 C17orf113A0A1B0GUU1 675 aa13.09□□□□□ -0.31
SEC22A-205ENST00000477063 FADS2P1A8MWK0 482 aa13.09□□□□□ -0.31
SEC22A-205ENST00000477063 BTN3A1O00481 513 aa13.09□□□□□ -0.31
SEC22A-205ENST00000477063 GPR39O43194 453 aa13.09□□□□□ -0.31
SEC22A-205ENST00000477063 PLRG1O43660 514 aaKnown RBP13.09□□□□□ -0.31
SEC22A-205ENST00000477063 SNX2O60749 519 aa13.09□□□□□ -0.31
SEC22A-205ENST00000477063 CCDC22O60826 627 aa13.09□□□□□ -0.31
SEC22A-205ENST00000477063 ATG13O75143 517 aa13.09□□□□□ -0.31
SEC22A-205ENST00000477063 TRIM16O95361 564 aa13.09□□□□□ -0.31
SEC22A-205ENST00000477063 EGFP01133 1207 aa13.09□□□□□ -0.31
SEC22A-205ENST00000477063 S100BP04271 92 aaPredicted RBP13.09□□□□□ -0.31
SEC22A-205ENST00000477063 BMP1P13497 986 aa13.09□□□□□ -0.31
SEC22A-205ENST00000477063 MTHFD2P13995 350 aa13.09□□□□□ -0.31
SEC22A-205ENST00000477063 GFAPP14136 432 aa13.09□□□□□ -0.31
SEC22A-205ENST00000477063 GPR1P46091 355 aa13.09□□□□□ -0.31
SEC22A-205ENST00000477063 RPS21P63220 83 aaKnown RBP13.09□□□□□ -0.31
SEC22A-205ENST00000477063 IRX1P78414 480 aaPredicted RBP13.09□□□□□ -0.31
SEC22A-205ENST00000477063 CDC16Q13042 620 aa13.09□□□□□ -0.31
SEC22A-205ENST00000477063 IFT88Q13099 833 aa13.09□□□□□ -0.31
SEC22A-205ENST00000477063 GTF2H3Q13889 308 aa13.09□□□□□ -0.31
SEC22A-205ENST00000477063 CCINQ13939 588 aa13.09□□□□□ -0.31
SEC22A-205ENST00000477063 ZNF678Q5SXM1 525 aa13.09□□□□□ -0.31
SEC22A-205ENST00000477063 METTL21CQ5VZV1 264 aa13.09□□□□□ -0.31
SEC22A-205ENST00000477063 NAPRTQ6XQN6 538 aa13.09□□□□□ -0.31
SEC22A-205ENST00000477063 GPSM1Q86YR5 675 aa13.09□□□□□ -0.31
SEC22A-205ENST00000477063 SPATA6LQ8N4H0 392 aa13.09□□□□□ -0.31
SEC22A-205ENST00000477063 HDDC3Q8N4P3 179 aa13.09□□□□□ -0.31
SEC22A-205ENST00000477063 AADATQ8N5Z0 425 aa13.09□□□□□ -0.31
SEC22A-205ENST00000477063 PNPLA1Q8N8W4 532 aa13.09□□□□□ -0.31
SEC22A-205ENST00000477063 PDPRQ8NCN5 879 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms