RNA–Protein interactions for RNA: ENST00000476590.1

CD55-208, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 1 (best)

Gene CD55, Length 2,163 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-208ENST00000476590 FBP1P09467 338 aa4.12□□□□□ -1.75
CD55-208ENST00000476590 CLUP10909 449 aa4.12□□□□□ -1.75
CD55-208ENST00000476590 HSD3B1P14060 373 aa4.12□□□□□ -1.75
CD55-208ENST00000476590 SLC2A4P14672 509 aa4.12□□□□□ -1.75
CD55-208ENST00000476590 SPNP16150 400 aa4.12□□□□□ -1.75
CD55-208ENST00000476590 NELFEP18615 380 aaKnown RBP4.12□□□□□ -1.75
CD55-208ENST00000476590 AOC1P19801 751 aa4.12□□□□□ -1.75
CD55-208ENST00000476590 MATN1P21941 496 aa4.12□□□□□ -1.75
CD55-208ENST00000476590 GPX4P36969 197 aaPredicted RBP4.12□□□□□ -1.75
CD55-208ENST00000476590 ACTR1BP42025 376 aa4.12□□□□□ -1.75
CD55-208ENST00000476590 LIG4P49917 911 aa4.12□□□□□ -1.75
CD55-208ENST00000476590 NKX3-2P78367 333 aa4.12□□□□□ -1.75
CD55-208ENST00000476590 RBP5P82980 135 aa4.12□□□□□ -1.75
CD55-208ENST00000476590 SLC3A1Q07837 685 aa4.12□□□□□ -1.75
CD55-208ENST00000476590 CLN3Q13286 438 aa4.12□□□□□ -1.75
CD55-208ENST00000476590 GRB10Q13322 594 aa4.12□□□□□ -1.75
CD55-208ENST00000476590 BFSP2Q13515 415 aa4.12□□□□□ -1.75
CD55-208ENST00000476590 CAMK1Q14012 370 aa4.12□□□□□ -1.75
CD55-208ENST00000476590 IKBKEQ14164 716 aa4.12□□□□□ -1.75
CD55-208ENST00000476590 PPP2R5DQ14738 602 aa4.12□□□□□ -1.75
CD55-208ENST00000476590 TRAM2Q15035 370 aa4.12□□□□□ -1.75
CD55-208ENST00000476590 PON3Q15166 354 aa4.12□□□□□ -1.75
CD55-208ENST00000476590 TAB1Q15750 504 aa4.12□□□□□ -1.75
CD55-208ENST00000476590 SLC1A5Q15758 541 aa4.12□□□□□ -1.75
CD55-208ENST00000476590 SMAD1Q15797 465 aaKnown RBP4.12□□□□□ -1.75
CD55-208ENST00000476590 ZYXQ15942 572 aaKnown RBP4.12□□□□□ -1.75
CD55-208ENST00000476590 SLC18A3Q16572 532 aa4.12□□□□□ -1.75
CD55-208ENST00000476590 UBE2SQ16763 222 aa4.12□□□□□ -1.75
CD55-208ENST00000476590 PARP15Q460N3 678 aa4.12□□□□□ -1.75
CD55-208ENST00000476590 KLHL12Q53G59 568 aa4.12□□□□□ -1.75
CD55-208ENST00000476590 PRR16Q569H4 304 aa4.12□□□□□ -1.75
CD55-208ENST00000476590 ARMCX4Q5H9R4 360 aa4.12□□□□□ -1.75
CD55-208ENST00000476590 PAGE2BQ5JRK9 111 aa4.12□□□□□ -1.75
CD55-208ENST00000476590 KRT40Q6A162 431 aa4.12□□□□□ -1.75
CD55-208ENST00000476590 SULT1C3Q6IMI6 304 aa4.12□□□□□ -1.75
CD55-208ENST00000476590 C11orf88Q6PI97 169 aa4.12□□□□□ -1.75
CD55-208ENST00000476590 FRMD7Q6ZUT3 714 aa4.12□□□□□ -1.75
CD55-208ENST00000476590 RRAGAQ7L523 313 aa4.12□□□□□ -1.75
CD55-208ENST00000476590 COMMD7Q86VX2 200 aa4.12□□□□□ -1.75
CD55-208ENST00000476590 CDKL3Q8IVW4 592 aaPredicted RBP4.12□□□□□ -1.75
CD55-208ENST00000476590 FAM47BQ8NA70 645 aa4.12□□□□□ -1.75
CD55-208ENST00000476590 IL17RCQ8NAC3 791 aa4.12□□□□□ -1.75
CD55-208ENST00000476590 OR10T2Q8NGX3 314 aa4.12□□□□□ -1.75
CD55-208ENST00000476590 PSMA8Q8TAA3 256 aa4.12□□□□□ -1.75
CD55-208ENST00000476590 PPP1R13LQ8WUF5 828 aa4.12□□□□□ -1.75
CD55-208ENST00000476590 PROX1Q92786 737 aa4.12□□□□□ -1.75
CD55-208ENST00000476590 RIT1Q92963 219 aa4.12□□□□□ -1.75
CD55-208ENST00000476590 TBRG4Q969Z0 631 aaKnown RBP eCLIP4.12□□□□□ -1.75
CD55-208ENST00000476590 KIAA1191Q96A73 305 aa4.12□□□□□ -1.75
CD55-208ENST00000476590 CCDC74AQ96AQ1 378 aa4.12□□□□□ -1.75
CD55-208ENST00000476590 NXPE2Q96DL1 559 aa4.12□□□□□ -1.75
CD55-208ENST00000476590 MTFMTQ96DP5 389 aaKnown RBP4.12□□□□□ -1.75
CD55-208ENST00000476590 FUBP3Q96I24 572 aaKnown RBP eCLIP4.12□□□□□ -1.75
CD55-208ENST00000476590 BTN2A3PQ96KV6 586 aa4.12□□□□□ -1.75
CD55-208ENST00000476590 RHOVQ96L33 236 aa4.12□□□□□ -1.75
CD55-208ENST00000476590 LURAP1Q96LR2 239 aa4.12□□□□□ -1.75
CD55-208ENST00000476590 QRFPRQ96P65 431 aa4.12□□□□□ -1.75
CD55-208ENST00000476590 KCTD14Q9BQ13 255 aaPredicted RBP4.12□□□□□ -1.75
CD55-208ENST00000476590 PYM1Q9BRP8 204 aaKnown RBP4.12□□□□□ -1.75
CD55-208ENST00000476590 MTG1Q9BT17 334 aaPredicted RBP4.12□□□□□ -1.75
CD55-208ENST00000476590 FRMD8P1Q9BZ68 369 aaPredicted RBP4.12□□□□□ -1.75
CD55-208ENST00000476590 GPR63Q9BZJ6 419 aa4.12□□□□□ -1.75
CD55-208ENST00000476590 SHARPINQ9H0F6 387 aa4.12□□□□□ -1.75
CD55-208ENST00000476590 PUS7LQ9H0K6 701 aaKnown RBP4.12□□□□□ -1.75
CD55-208ENST00000476590 ADAMTS10Q9H324 1103 aa4.12□□□□□ -1.75
CD55-208ENST00000476590 C11orf49Q9H6J7 331 aa4.12□□□□□ -1.75
CD55-208ENST00000476590 NIPAL2Q9H841 368 aa4.12□□□□□ -1.75
CD55-208ENST00000476590 ZFAND3Q9H8U3 227 aa4.12□□□□□ -1.75
CD55-208ENST00000476590 COPS7BQ9H9Q2 264 aaPredicted RBP4.12□□□□□ -1.75
CD55-208ENST00000476590 CHMP1AQ9HD42 196 aaPredicted RBP4.12□□□□□ -1.75
CD55-208ENST00000476590 CABP5Q9NP86 173 aa4.12□□□□□ -1.75
CD55-208ENST00000476590 ABCB10Q9NRK6 738 aa4.12□□□□□ -1.75
CD55-208ENST00000476590 CCM2LQ9NUG4 571 aaPredicted RBP4.12□□□□□ -1.75
CD55-208ENST00000476590 EVA1BQ9NVM1 165 aa4.12□□□□□ -1.75
CD55-208ENST00000476590 DNAJC28Q9NX36 388 aa4.12□□□□□ -1.75
CD55-208ENST00000476590 CPA4Q9UI42 421 aa4.12□□□□□ -1.75
CD55-208ENST00000476590 FOXD3Q9UJU5 478 aaPredicted RBP4.12□□□□□ -1.75
CD55-208ENST00000476590 ITGA11Q9UKX5 1188 aa4.12□□□□□ -1.75
CD55-208ENST00000476590 TRPC5Q9UL62 973 aaPredicted RBP4.12□□□□□ -1.75
CD55-208ENST00000476590 SCML1Q9UN30 329 aa4.12□□□□□ -1.75
CD55-208ENST00000476590 MAGED2Q9UNF1 606 aaPredicted RBP4.12□□□□□ -1.75
CD55-208ENST00000476590 COG5Q9UP83 839 aa4.12□□□□□ -1.75
CD55-208ENST00000476590 BAIAP2Q9UQB8 552 aa4.12□□□□□ -1.75
CD55-208ENST00000476590 TCAF1Q9Y4C2 921 aa4.12□□□□□ -1.75
CD55-208ENST00000476590 COPG1Q9Y678 874 aaKnown RBP4.12□□□□□ -1.75
CD55-208ENST00000476590 ARHGAP23Q9P227 1491 aa4.11□□□□□ -1.75
CD55-208ENST00000476590 ECM29Q5VYK3 1845 aa4.11□□□□□ -1.75
CD55-208ENST00000476590 CROCCQ5TZA2 2017 aa4.11□□□□□ -1.75
CD55-208ENST00000476590 CNTNAP1P78357 1384 aa4.11□□□□□ -1.75
CD55-208ENST00000476590 TNRQ92752 1358 aa4.11□□□□□ -1.75
CD55-208ENST00000476590 TRBV23OR9-2A0A075B6M9 112 aa4.11□□□□□ -1.75
CD55-208ENST00000476590 A0A1B0GV90 55 aa4.11□□□□□ -1.75
CD55-208ENST00000476590 PRSS51A0A1B0GVH4 220 aa4.11□□□□□ -1.75
CD55-208ENST00000476590 C7orf72A4D263 438 aa4.11□□□□□ -1.75
CD55-208ENST00000476590 CLDN4O14493 209 aa4.11□□□□□ -1.75
CD55-208ENST00000476590 AP3D1O14617 1153 aa4.11□□□□□ -1.75
CD55-208ENST00000476590 FRS3O43559 492 aa4.11□□□□□ -1.75
CD55-208ENST00000476590 TYROBPO43914 113 aa4.11□□□□□ -1.75
CD55-208ENST00000476590 CIDEAO60543 219 aa4.11□□□□□ -1.75
CD55-208ENST00000476590 CST8O60676 142 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms