RNA–Protein interactions for RNA: ENST00000476183.2

LIME1-204, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5

Gene LIME1, Length 809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-204ENST00000476183 GLIS1Q8NBF1 620 aa20.82■□□□□ 0.92
LIME1-204ENST00000476183 RCBTB1Q8NDN9 531 aa20.82■□□□□ 0.92
LIME1-204ENST00000476183 ZNF248Q8NDW4 579 aa20.82■□□□□ 0.92
LIME1-204ENST00000476183 TRIM58Q8NG06 486 aa20.82■□□□□ 0.92
LIME1-204ENST00000476183 DNAJC1Q96KC8 554 aaKnown RBP20.82■□□□□ 0.92
LIME1-204ENST00000476183 CCDC74BQ96LY2 380 aa20.82■□□□□ 0.92
LIME1-204ENST00000476183 TTC25Q96NG3 672 aa20.82■□□□□ 0.92
LIME1-204ENST00000476183 ZCCHC2Q9C0B9 1178 aaKnown RBP20.82■□□□□ 0.92
LIME1-204ENST00000476183 ETNK1Q9HBU6 452 aa20.82■□□□□ 0.92
LIME1-204ENST00000476183 ZNF624Q9P2J8 865 aaPredicted RBP20.82■□□□□ 0.92
LIME1-204ENST00000476183 PISDQ9UG56 409 aa20.82■□□□□ 0.92
LIME1-204ENST00000476183 ZNF148Q9UQR1 794 aa20.82■□□□□ 0.92
LIME1-204ENST00000476183 IGSF10Q6WRI0 2623 aa20.82■□□□□ 0.92
LIME1-204ENST00000476183 OR2AG2A6NM03 316 aa20.81■□□□□ 0.92
LIME1-204ENST00000476183 AGAP14A8MT82 685 aa20.81■□□□□ 0.92
LIME1-204ENST00000476183 PDZK1P1A8MUH7 402 aa20.81■□□□□ 0.92
LIME1-204ENST00000476183 POP7O75817 140 aaKnown RBP20.81■□□□□ 0.92
LIME1-204ENST00000476183 RPL10P27635 214 aaKnown RBP20.81■□□□□ 0.92
LIME1-204ENST00000476183 ETV5P41161 510 aa20.81■□□□□ 0.92
LIME1-204ENST00000476183 SLC19A1P41440 591 aa20.81■□□□□ 0.92
LIME1-204ENST00000476183 MLLT3P42568 568 aaPredicted RBP20.81■□□□□ 0.92
LIME1-204ENST00000476183 LIMK2P53671 638 aa20.81■□□□□ 0.92
LIME1-204ENST00000476183 DRG2P55039 364 aaKnown RBP20.81■□□□□ 0.92
LIME1-204ENST00000476183 PDE1BQ01064 536 aa20.81■□□□□ 0.92
LIME1-204ENST00000476183 OR4D9Q8NGE8 314 aa20.81■□□□□ 0.92
LIME1-204ENST00000476183 LRRC45Q96CN5 670 aa20.81■□□□□ 0.92
LIME1-204ENST00000476183 FAM96AQ9H5X1 160 aa20.81■□□□□ 0.92
LIME1-204ENST00000476183 WDR37Q9Y2I8 494 aa20.81■□□□□ 0.92
LIME1-204ENST00000476183 PRAMEF33A0A0G2JMD5 474 aa20.8■□□□□ 0.92
LIME1-204ENST00000476183 PSMD3O43242 534 aa20.8■□□□□ 0.92
LIME1-204ENST00000476183 NRDCO43847 1150 aa20.8■□□□□ 0.92
LIME1-204ENST00000476183 THRAP10827 490 aa20.8■□□□□ 0.92
LIME1-204ENST00000476183 XRCC1P18887 633 aaPredicted RBP20.8■□□□□ 0.92
LIME1-204ENST00000476183 MSH3P20585 1137 aa20.8■□□□□ 0.92
LIME1-204ENST00000476183 AKT1P31749 480 aa20.8■□□□□ 0.92
LIME1-204ENST00000476183 TLE3Q04726 772 aa20.8■□□□□ 0.92
LIME1-204ENST00000476183 POU6F1Q14863 301 aa20.8■□□□□ 0.92
LIME1-204ENST00000476183 ABRAXAS1Q6UWZ7 409 aa20.8■□□□□ 0.92
LIME1-204ENST00000476183 WASH2PQ6VEQ5 465 aa20.8■□□□□ 0.92
LIME1-204ENST00000476183 FAM83HQ6ZRV2 1179 aaPredicted RBP20.8■□□□□ 0.92
LIME1-204ENST00000476183 DET1Q7L5Y6 550 aa20.8■□□□□ 0.92
LIME1-204ENST00000476183 BEND7Q8N7W2 519 aaPredicted RBP20.8■□□□□ 0.92
LIME1-204ENST00000476183 OR10G6Q8NH81 332 aa20.8■□□□□ 0.92
LIME1-204ENST00000476183 SH3KBP1Q96B97 665 aa20.8■□□□□ 0.92
LIME1-204ENST00000476183 SGF29Q96ES7 293 aa20.8■□□□□ 0.92
LIME1-204ENST00000476183 C19orf43Q9BQ61 176 aa20.8■□□□□ 0.92
LIME1-204ENST00000476183 TBC1D10AQ9BXI6 508 aa20.8■□□□□ 0.92
LIME1-204ENST00000476183 STN1Q9H668 368 aaKnown RBP20.8■□□□□ 0.92
LIME1-204ENST00000476183 WASH6PQ9NQA3 447 aa20.8■□□□□ 0.92
LIME1-204ENST00000476183 GOLGA6L3A6NEY3 463 aa20.79■□□□□ 0.92
LIME1-204ENST00000476183 OR52A4PA6NMU1 304 aa20.79■□□□□ 0.92
LIME1-204ENST00000476183 SGTAO43765 313 aa20.79■□□□□ 0.92
LIME1-204ENST00000476183 FGGP02679 453 aa20.79■□□□□ 0.92
LIME1-204ENST00000476183 JMJD7P0C870 316 aa20.79■□□□□ 0.92
LIME1-204ENST00000476183 ZSCAN5DPP0CG00 497 aa20.79■□□□□ 0.92
LIME1-204ENST00000476183 IDSP22304 550 aa20.79■□□□□ 0.92
LIME1-204ENST00000476183 SLC5A2P31639 672 aa20.79■□□□□ 0.92
LIME1-204ENST00000476183 CXCR5P32302 372 aa20.79■□□□□ 0.92
LIME1-204ENST00000476183 FDFT1P37268 417 aa20.79■□□□□ 0.92
LIME1-204ENST00000476183 HADHAP40939 763 aa20.79■□□□□ 0.92
LIME1-204ENST00000476183 CDKN1CP49918 316 aaPredicted RBP20.79■□□□□ 0.92
LIME1-204ENST00000476183 DMPKQ09013 629 aa20.79■□□□□ 0.92
LIME1-204ENST00000476183 SEPT6Q14141 434 aa20.79■□□□□ 0.92
LIME1-204ENST00000476183 CLCA4Q14CN2 919 aa20.79■□□□□ 0.92
LIME1-204ENST00000476183 CCNG2Q16589 344 aa20.79■□□□□ 0.92
LIME1-204ENST00000476183 FNBP1LQ5T0N5 605 aa20.79■□□□□ 0.92
LIME1-204ENST00000476183 AGAP9Q5VTM2 703 aa20.79■□□□□ 0.92
LIME1-204ENST00000476183 TMEM71Q6P5X7 295 aa20.79■□□□□ 0.92
LIME1-204ENST00000476183 PDZD3Q86UT5 571 aa20.79■□□□□ 0.92
LIME1-204ENST00000476183 AMZ2Q86W34 360 aa20.79■□□□□ 0.92
LIME1-204ENST00000476183 OR52K1Q8NGK4 314 aa20.79■□□□□ 0.92
LIME1-204ENST00000476183 TMEM159Q96B96 161 aa20.79■□□□□ 0.92
LIME1-204ENST00000476183 AHCYL2Q96HN2 611 aaKnown RBP20.79■□□□□ 0.92
LIME1-204ENST00000476183 CMKLR1Q99788 373 aa20.79■□□□□ 0.92
LIME1-204ENST00000476183 CRLS1Q9UJA2 301 aa20.79■□□□□ 0.92
LIME1-204ENST00000476183 PCDHGA7Q9Y5G6 932 aa20.79■□□□□ 0.92
LIME1-204ENST00000476183 MGAQ8IWI9 3026 aa20.78■□□□□ 0.92
LIME1-204ENST00000476183 DUX1O43812 170 aa20.78■□□□□ 0.92
LIME1-204ENST00000476183 CEP104O60308 925 aa20.78■□□□□ 0.92
LIME1-204ENST00000476183 SUN1O94901 812 aa20.78■□□□□ 0.92
LIME1-204ENST00000476183 PRSS56P0CW18 603 aa20.78■□□□□ 0.92
LIME1-204ENST00000476183 CCL4P13236 92 aa20.78■□□□□ 0.92
LIME1-204ENST00000476183 VCLP18206 1134 aa20.78■□□□□ 0.92
LIME1-204ENST00000476183 MC4RP32245 332 aa20.78■□□□□ 0.92
LIME1-204ENST00000476183 GRIA1P42261 906 aa20.78■□□□□ 0.92
LIME1-204ENST00000476183 MAPK9P45984 424 aa20.78■□□□□ 0.92
LIME1-204ENST00000476183 EPHA4P54764 986 aa20.78■□□□□ 0.92
LIME1-204ENST00000476183 NFE2L1Q14494 772 aa20.78■□□□□ 0.92
LIME1-204ENST00000476183 LONRF2Q1L5Z9 754 aa20.78■□□□□ 0.92
LIME1-204ENST00000476183 DRICH1Q6PGQ1 229 aaPredicted RBP20.78■□□□□ 0.92
LIME1-204ENST00000476183 XKR5Q6UX68 686 aa20.78■□□□□ 0.92
LIME1-204ENST00000476183 SNX20Q7Z614 316 aa20.78■□□□□ 0.92
LIME1-204ENST00000476183 NXPE1Q8N323 547 aa20.78■□□□□ 0.92
LIME1-204ENST00000476183 AVL9Q8NBF6 648 aa20.78■□□□□ 0.92
LIME1-204ENST00000476183 KCNE4Q8WWG9 221 aa20.78■□□□□ 0.92
LIME1-204ENST00000476183 DPYSL5Q9BPU6 564 aa20.78■□□□□ 0.92
LIME1-204ENST00000476183 LDHAL6BQ9BYZ2 381 aaPredicted RBP20.78■□□□□ 0.92
LIME1-204ENST00000476183 NLE1Q9NVX2 485 aaPredicted RBP20.78■□□□□ 0.92
LIME1-204ENST00000476183 PDP2Q9P2J9 529 aa20.78■□□□□ 0.92
LIME1-204ENST00000476183 DNMT3AQ9Y6K1 912 aaPredicted RBP20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms