RNA–Protein interactions for RNA: ENST00000475693.1

ATG4B-217, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 2,237 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-217ENST00000475693 SNX3O60493 162 aa17.86■□□□□ 0.45
ATG4B-217ENST00000475693 ATP6V1G2O95670 118 aa17.86■□□□□ 0.45
ATG4B-217ENST00000475693 CRHR1P34998 444 aa17.86■□□□□ 0.45
ATG4B-217ENST00000475693 CTSCP53634 463 aa17.86■□□□□ 0.45
ATG4B-217ENST00000475693 INPP5AQ14642 412 aa17.86■□□□□ 0.45
ATG4B-217ENST00000475693 HSF5Q4G112 596 aaPredicted RBP17.86■□□□□ 0.45
ATG4B-217ENST00000475693 CLEC14AQ86T13 490 aa17.86■□□□□ 0.45
ATG4B-217ENST00000475693 NRSN1Q8IZ57 195 aa17.86■□□□□ 0.45
ATG4B-217ENST00000475693 SLC17A9Q9BYT1 436 aa17.86■□□□□ 0.45
ATG4B-217ENST00000475693 EBF2Q9HAK2 575 aa17.86■□□□□ 0.45
ATG4B-217ENST00000475693 NKIRAS1Q9NYS0 192 aa17.86■□□□□ 0.45
ATG4B-217ENST00000475693 NCKAP1Q9Y2A7 1128 aa17.86■□□□□ 0.45
ATG4B-217ENST00000475693 SIT1Q9Y3P8 196 aa17.86■□□□□ 0.45
ATG4B-217ENST00000475693 SGTAO43765 313 aa17.86■□□□□ 0.45
ATG4B-217ENST00000475693 ETV4P43268 484 aa17.86■□□□□ 0.45
ATG4B-217ENST00000475693 KCNC1P48547 511 aa17.86■□□□□ 0.45
ATG4B-217ENST00000475693 POLD2P49005 469 aa17.86■□□□□ 0.45
ATG4B-217ENST00000475693 CLDN2P57739 230 aa17.86■□□□□ 0.45
ATG4B-217ENST00000475693 ZXDAP98168 799 aa17.86■□□□□ 0.45
ATG4B-217ENST00000475693 CREB5Q02930 508 aa17.86■□□□□ 0.45
ATG4B-217ENST00000475693 SF3A3Q12874 501 aaKnown RBP eCLIP17.86■□□□□ 0.458e-7■■■□□ 19
ATG4B-217ENST00000475693 IRF4Q15306 451 aa17.86■□□□□ 0.45
ATG4B-217ENST00000475693 ZDHHC20Q5W0Z9 365 aa17.86■□□□□ 0.45
ATG4B-217ENST00000475693 DOK6Q6PKX4 331 aa17.86■□□□□ 0.45
ATG4B-217ENST00000475693 CYP2U1Q7Z449 544 aa17.86■□□□□ 0.45
ATG4B-217ENST00000475693 RASGEF1AQ8N9B8 481 aa17.86■□□□□ 0.45
ATG4B-217ENST00000475693 GPR78Q96P69 363 aa17.86■□□□□ 0.45
ATG4B-217ENST00000475693 IQCGQ9H095 443 aaKnown RBP17.86■□□□□ 0.45
ATG4B-217ENST00000475693 C6orf106Q9H6K1 298 aaPredicted RBP17.86■□□□□ 0.45
ATG4B-217ENST00000475693 FBRSQ9HAH7 460 aa17.86■□□□□ 0.45
ATG4B-217ENST00000475693 ITM2CQ9NQX7 267 aa17.86■□□□□ 0.45
ATG4B-217ENST00000475693 IGSF5Q9NSI5 407 aa17.86■□□□□ 0.45
ATG4B-217ENST00000475693 SMG5Q9UPR3 1016 aaKnown RBP17.86■□□□□ 0.45
ATG4B-217ENST00000475693 KNL1Q8NG31 2342 aa17.86■□□□□ 0.45
ATG4B-217ENST00000475693 TMEM202A6NGA9 273 aa17.85■□□□□ 0.45
ATG4B-217ENST00000475693 E5RI56 91 aa17.85■□□□□ 0.45
ATG4B-217ENST00000475693 H0Y8X5 98 aa17.85■□□□□ 0.45
ATG4B-217ENST00000475693 H3BMM5 538 aa17.85■□□□□ 0.45
ATG4B-217ENST00000475693 TK2O00142 265 aa17.85■□□□□ 0.45
ATG4B-217ENST00000475693 ASMTLO95671 621 aa17.85■□□□□ 0.45
ATG4B-217ENST00000475693 MPOP05164 745 aa17.85■□□□□ 0.45
ATG4B-217ENST00000475693 PDAP1Q13442 181 aaKnown RBP17.85■□□□□ 0.45
ATG4B-217ENST00000475693 TMEM259Q4ZIN3 620 aa17.85■□□□□ 0.45
ATG4B-217ENST00000475693 PNCKQ6P2M8 343 aa17.85■□□□□ 0.45
ATG4B-217ENST00000475693 CPNE9Q8IYJ1 553 aa17.85■□□□□ 0.45
ATG4B-217ENST00000475693 C19orf43Q9BQ61 176 aa17.85■□□□□ 0.45
ATG4B-217ENST00000475693 OR2AG1Q9H205 316 aa17.85■□□□□ 0.45
ATG4B-217ENST00000475693 ZDBF2Q9HCK1 2354 aa17.85■□□□□ 0.45
ATG4B-217ENST00000475693 SCAMP1O15126 338 aa17.84■□□□□ 0.45
ATG4B-217ENST00000475693 WISP3O95389 354 aaPredicted RBP17.84■□□□□ 0.45
ATG4B-217ENST00000475693 ESR1P03372 595 aa17.84■□□□□ 0.45
ATG4B-217ENST00000475693 ATP1B2P14415 290 aaPredicted RBP17.84■□□□□ 0.45
ATG4B-217ENST00000475693 CLCN7P51798 805 aa17.84■□□□□ 0.45
ATG4B-217ENST00000475693 RPS21P63220 83 aaKnown RBP17.84■□□□□ 0.45
ATG4B-217ENST00000475693 SGCGQ13326 291 aa17.84■□□□□ 0.45
ATG4B-217ENST00000475693 TSSK4Q6SA08 328 aa17.84■□□□□ 0.45
ATG4B-217ENST00000475693 SYNPOQ8N3V7 929 aa17.84■□□□□ 0.45
ATG4B-217ENST00000475693 LILRA3Q8N6C8 439 aaPredicted RBP17.84■□□□□ 0.45
ATG4B-217ENST00000475693 CD200R1Q8TD46 325 aa17.84■□□□□ 0.45
ATG4B-217ENST00000475693 ACMSDQ8TDX5 336 aa17.84■□□□□ 0.45
ATG4B-217ENST00000475693 EEF1AKMT1Q8WVE0 214 aa17.84■□□□□ 0.45
ATG4B-217ENST00000475693 ALKBH8Q96BT7 664 aaKnown RBP17.84■□□□□ 0.45
ATG4B-217ENST00000475693 TOE1Q96GM8 510 aaKnown RBP17.84■□□□□ 0.45
ATG4B-217ENST00000475693 BTBD1Q9H0C5 482 aa17.84■□□□□ 0.45
ATG4B-217ENST00000475693 TAS2R13Q9NYV9 303 aa17.84■□□□□ 0.45
ATG4B-217ENST00000475693 TECTAO75443 2155 aa17.84■□□□□ 0.45
ATG4B-217ENST00000475693 RGSL1A5PLK6 1076 aa17.84■□□□□ 0.45
ATG4B-217ENST00000475693 VIMP08670 466 aaKnown RBP17.84■□□□□ 0.45
ATG4B-217ENST00000475693 SBK3P0C264 359 aa17.84■□□□□ 0.45
ATG4B-217ENST00000475693 CRABP2P29373 138 aa17.84■□□□□ 0.45
ATG4B-217ENST00000475693 NSG1P42857 185 aa17.84■□□□□ 0.45
ATG4B-217ENST00000475693 ZBTB16Q05516 673 aa17.84■□□□□ 0.45
ATG4B-217ENST00000475693 TMEM115Q12893 351 aaPredicted RBP17.84■□□□□ 0.45
ATG4B-217ENST00000475693 GALNTL6Q49A17 601 aa17.84■□□□□ 0.45
ATG4B-217ENST00000475693 TAF1BQ53T94 588 aaPredicted RBP17.84■□□□□ 0.45
ATG4B-217ENST00000475693 USP30Q70CQ3 517 aa17.84■□□□□ 0.45
ATG4B-217ENST00000475693 HEATR4Q86WZ0 1026 aa17.84■□□□□ 0.45
ATG4B-217ENST00000475693 HORMAD1Q86X24 394 aa17.84■□□□□ 0.45
ATG4B-217ENST00000475693 TMEM151AQ8N4L1 468 aa17.84■□□□□ 0.45
ATG4B-217ENST00000475693 TP53I13Q8NBR0 393 aaPredicted RBP17.84■□□□□ 0.45
ATG4B-217ENST00000475693 SCYL1Q96KG9 808 aa17.84■□□□□ 0.45
ATG4B-217ENST00000475693 ELAC2Q9BQ52 826 aaKnown RBP17.84■□□□□ 0.45
ATG4B-217ENST00000475693 C1QTNF2Q9BXJ5 285 aa17.84■□□□□ 0.45
ATG4B-217ENST00000475693 SSU72Q9NP77 194 aaKnown RBP17.84■□□□□ 0.45
ATG4B-217ENST00000475693 FZD4Q9ULV1 537 aa17.84■□□□□ 0.45
ATG4B-217ENST00000475693 SLCO1B1Q9Y6L6 691 aa17.84■□□□□ 0.45
ATG4B-217ENST00000475693 IGLV3-16A0A075B6K0 115 aa17.83■□□□□ 0.45
ATG4B-217ENST00000475693 PFDN6O15212 129 aa17.83■□□□□ 0.45
ATG4B-217ENST00000475693 ZBTB14O43829 449 aa17.83■□□□□ 0.45
ATG4B-217ENST00000475693 ZNF37AP17032 561 aaPredicted RBP17.83■□□□□ 0.45
ATG4B-217ENST00000475693 MSH3P20585 1137 aa17.83■□□□□ 0.45
ATG4B-217ENST00000475693 DPTQ07507 201 aa17.83■□□□□ 0.45
ATG4B-217ENST00000475693 DMWDQ09019 674 aa17.83■□□□□ 0.45
ATG4B-217ENST00000475693 SEPT7Q16181 437 aaKnown RBP17.83■□□□□ 0.45
ATG4B-217ENST00000475693 HHATQ5VTY9 493 aa17.83■□□□□ 0.45
ATG4B-217ENST00000475693 CES4AQ5XG92 561 aa17.83■□□□□ 0.45
ATG4B-217ENST00000475693 FSTL5Q8N475 847 aaPredicted RBP17.83■□□□□ 0.45
ATG4B-217ENST00000475693 DYDC1Q8WWB3 177 aa17.83■□□□□ 0.45
ATG4B-217ENST00000475693 DCUN1D1Q96GG9 259 aa17.83■□□□□ 0.45
ATG4B-217ENST00000475693 UBXN10Q96LJ8 280 aa17.83■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms