RNA–Protein interactions for RNA: ENST00000474956.1

RNF220-211, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 3,303 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-211ENST00000474956 ATOH8Q96SQ7 321 aa12.33□□□□□ -0.44
RNF220-211ENST00000474956 TNKS2Q9H2K2 1166 aa12.33□□□□□ -0.44
RNF220-211ENST00000474956 NLE1Q9NVX2 485 aaPredicted RBP12.33□□□□□ -0.44
RNF220-211ENST00000474956 AFF4Q9UHB7 1163 aaKnown RBP12.33□□□□□ -0.44
RNF220-211ENST00000474956 PIKFYVEQ9Y2I7 2098 aa12.33□□□□□ -0.44
RNF220-211ENST00000474956 SUPT3HB4E1H0 165 aa12.32□□□□□ -0.44
RNF220-211ENST00000474956 SUPT3HO75486 399 aa12.32□□□□□ -0.44
RNF220-211ENST00000474956 CLDN11O75508 207 aa12.32□□□□□ -0.44
RNF220-211ENST00000474956 RBP1P09455 135 aa12.32□□□□□ -0.44
RNF220-211ENST00000474956 TUFMP49411 452 aaKnown RBP12.32□□□□□ -0.44
RNF220-211ENST00000474956 ALG1LQ6GMV1 187 aa12.32□□□□□ -0.44
RNF220-211ENST00000474956 CLVS1Q8IUQ0 354 aaPredicted RBP12.32□□□□□ -0.44
RNF220-211ENST00000474956 TNIP2Q8NFZ5 429 aa12.32□□□□□ -0.44
RNF220-211ENST00000474956 ADAMTS16Q8TE57 1224 aa12.32□□□□□ -0.44
RNF220-211ENST00000474956 EEF1AKMT1Q8WVE0 214 aa12.32□□□□□ -0.44
RNF220-211ENST00000474956 BOCQ9BWV1 1114 aa12.32□□□□□ -0.44
RNF220-211ENST00000474956 LHX3Q9UBR4 397 aa12.32□□□□□ -0.44
RNF220-211ENST00000474956 HEMK1Q9Y5R4 338 aaPredicted RBP12.32□□□□□ -0.44
RNF220-211ENST00000474956 A0A1B0GVM2 712 aa12.32□□□□□ -0.44
RNF220-211ENST00000474956 ZNF839A8K0R7 811 aa12.32□□□□□ -0.44
RNF220-211ENST00000474956 ANKRD66B4E2M5 251 aa12.32□□□□□ -0.44
RNF220-211ENST00000474956 SOCS2O14508 198 aa12.32□□□□□ -0.44
RNF220-211ENST00000474956 PIP5K1BO14986 540 aa12.32□□□□□ -0.44
RNF220-211ENST00000474956 GREM1O60565 184 aa12.32□□□□□ -0.44
RNF220-211ENST00000474956 ECI2O75521 394 aa12.32□□□□□ -0.44
RNF220-211ENST00000474956 CES1P23141 567 aa12.32□□□□□ -0.44
RNF220-211ENST00000474956 EEF1DP29692 281 aaKnown RBP12.32□□□□□ -0.44
RNF220-211ENST00000474956 STT3AP46977 705 aa12.32□□□□□ -0.44
RNF220-211ENST00000474956 APLP1P51693 650 aa12.32□□□□□ -0.44
RNF220-211ENST00000474956 HK3P52790 923 aa12.32□□□□□ -0.44
RNF220-211ENST00000474956 HERVK_113P63132 956 aa12.32□□□□□ -0.44
RNF220-211ENST00000474956 GALNT1Q10472 559 aaPredicted RBP12.32□□□□□ -0.44
RNF220-211ENST00000474956 INTS11Q5TA45 600 aaKnown RBP12.32□□□□□ -0.44
RNF220-211ENST00000474956 TTC33Q6PID6 262 aaPredicted RBP12.32□□□□□ -0.44
RNF220-211ENST00000474956 LYSMD3Q7Z3D4 306 aa12.32□□□□□ -0.44
RNF220-211ENST00000474956 CPNE9Q8IYJ1 553 aa12.32□□□□□ -0.44
RNF220-211ENST00000474956 CANT1Q8WVQ1 401 aa12.32□□□□□ -0.44
RNF220-211ENST00000474956 ISOC1Q96CN7 298 aa12.32□□□□□ -0.44
RNF220-211ENST00000474956 ACOX2Q99424 681 aa12.32□□□□□ -0.44
RNF220-211ENST00000474956 ERVK-6Q9BXR3 956 aa12.32□□□□□ -0.44
RNF220-211ENST00000474956 AKTIPQ9H8T0 292 aa12.32□□□□□ -0.44
RNF220-211ENST00000474956 FAIMQ9NVQ4 179 aa12.32□□□□□ -0.44
RNF220-211ENST00000474956 VPS51Q9UID3 782 aa12.32□□□□□ -0.44
RNF220-211ENST00000474956 ZNF225Q9UK10 706 aa12.32□□□□□ -0.44
RNF220-211ENST00000474956 CPQQ9Y646 472 aa12.32□□□□□ -0.44
RNF220-211ENST00000474956 BTN3A1O00481 513 aa12.32□□□□□ -0.44
RNF220-211ENST00000474956 MAGEB3O15480 346 aa12.32□□□□□ -0.44
RNF220-211ENST00000474956 GRIA3P42263 894 aa12.32□□□□□ -0.44
RNF220-211ENST00000474956 ACADVLP49748 655 aa12.32□□□□□ -0.44
RNF220-211ENST00000474956 SLC7A2P52569 658 aa12.32□□□□□ -0.44
RNF220-211ENST00000474956 GPR180Q86V85 440 aa12.32□□□□□ -0.44
RNF220-211ENST00000474956 FUNDC1Q8IVP5 155 aa12.32□□□□□ -0.44
RNF220-211ENST00000474956 SMYD1Q8NB12 490 aa12.32□□□□□ -0.44
RNF220-211ENST00000474956 PCYOX1LQ8NBM8 494 aa12.32□□□□□ -0.44
RNF220-211ENST00000474956 ZUFSPQ96AP4 578 aa12.32□□□□□ -0.44
RNF220-211ENST00000474956 ROPN1LQ96C74 230 aa12.32□□□□□ -0.44
RNF220-211ENST00000474956 FEM1AQ9BSK4 669 aa12.32□□□□□ -0.44
RNF220-211ENST00000474956 PRUNE2Q8WUY3 3088 aa12.31□□□□□ -0.44
RNF220-211ENST00000474956 ILVBLA1L0T0 632 aa12.31□□□□□ -0.44
RNF220-211ENST00000474956 CLASP2O75122 1294 aaKnown RBP12.31□□□□□ -0.44
RNF220-211ENST00000474956 NDUFS3O75489 264 aa12.31□□□□□ -0.44
RNF220-211ENST00000474956 CXCL10P02778 98 aa12.31□□□□□ -0.44
RNF220-211ENST00000474956 CCL5P13501 91 aa12.31□□□□□ -0.44
RNF220-211ENST00000474956 ENTPD1P49961 510 aa12.31□□□□□ -0.44
RNF220-211ENST00000474956 PLOD1Q02809 727 aaPredicted RBP12.31□□□□□ -0.44
RNF220-211ENST00000474956 AAK1Q2M2I8 961 aa12.31□□□□□ -0.44
RNF220-211ENST00000474956 TYSND1Q2T9J0 566 aa12.31□□□□□ -0.44
RNF220-211ENST00000474956 SLC39A5Q6ZMH5 540 aa12.31□□□□□ -0.44
RNF220-211ENST00000474956 TAS2R42Q7RTR8 314 aa12.31□□□□□ -0.44
RNF220-211ENST00000474956 CLDN19Q8N6F1 224 aa12.31□□□□□ -0.44
RNF220-211ENST00000474956 PAK6Q9NQU5 681 aaPredicted RBP12.31□□□□□ -0.44
RNF220-211ENST00000474956 CCM2LQ9NUG4 571 aaPredicted RBP12.31□□□□□ -0.44
RNF220-211ENST00000474956 TEX28O15482 410 aa12.31□□□□□ -0.44
RNF220-211ENST00000474956 TSPAN12O95859 305 aa12.31□□□□□ -0.44
RNF220-211ENST00000474956 EPOP01588 193 aa12.31□□□□□ -0.44
RNF220-211ENST00000474956 SOD2P04179 222 aa12.31□□□□□ -0.44
RNF220-211ENST00000474956 MYF6P23409 242 aa12.31□□□□□ -0.44
RNF220-211ENST00000474956 CTSOP43234 321 aaPredicted RBP12.31□□□□□ -0.44
RNF220-211ENST00000474956 STK19P49842 368 aaPredicted RBP12.31□□□□□ -0.44
RNF220-211ENST00000474956 ATP4BP51164 291 aa12.31□□□□□ -0.44
RNF220-211ENST00000474956 FAM151BQ6UXP7 276 aa12.31□□□□□ -0.44
RNF220-211ENST00000474956 Q6ZNX1 250 aa12.31□□□□□ -0.44
RNF220-211ENST00000474956 GAREM2Q75VX8 874 aa12.31□□□□□ -0.44
RNF220-211ENST00000474956 RETREG3Q86VR2 466 aa12.31□□□□□ -0.44
RNF220-211ENST00000474956 DDIASQ8IXT1 998 aa12.31□□□□□ -0.44
RNF220-211ENST00000474956 ZNF786Q8N393 782 aa12.31□□□□□ -0.44
RNF220-211ENST00000474956 LKAAEAR1Q8TD35 194 aa12.31□□□□□ -0.44
RNF220-211ENST00000474956 C12orf43Q96C57 262 aaKnown RBP12.31□□□□□ -0.44
RNF220-211ENST00000474956 C19orf60Q96EN9 201 aa12.31□□□□□ -0.44
RNF220-211ENST00000474956 EBF1Q9UH73 591 aa12.31□□□□□ -0.44
RNF220-211ENST00000474956 EVLQ9UI08 416 aaPredicted RBP12.31□□□□□ -0.44
RNF220-211ENST00000474956 AQP12BA6NM10 295 aa12.31□□□□□ -0.44
RNF220-211ENST00000474956 CSF2RAP15509 400 aa12.31□□□□□ -0.44
RNF220-211ENST00000474956 KPNA1P52294 538 aaPredicted RBP12.31□□□□□ -0.44
RNF220-211ENST00000474956 STX1BP61266 288 aa12.31□□□□□ -0.44
RNF220-211ENST00000474956 C16orf72Q14CZ0 275 aa12.31□□□□□ -0.44
RNF220-211ENST00000474956 LARP4Q71RC2 724 aaKnown RBP eCLIP12.31□□□□□ -0.442e-7■■□□□ 12.9
RNF220-211ENST00000474956 PATL1Q86TB9 770 aaKnown RBP12.31□□□□□ -0.44
RNF220-211ENST00000474956 ZSWIM9Q86XI8 627 aa12.31□□□□□ -0.44
RNF220-211ENST00000474956 AQP12AQ8IXF9 295 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms