RNA–Protein interactions for RNA: ENST00000474835.5

USP16-205, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 1 (best)

Gene USP16, Length 3,835 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-205ENST00000474835 TIPRLO75663 272 aa4.06□□□□□ -1.76
USP16-205ENST00000474835 CST3P01034 146 aaPredicted RBP4.06□□□□□ -1.76
USP16-205ENST00000474835 SLC4A1P02730 911 aa4.06□□□□□ -1.76
USP16-205ENST00000474835 C9P02748 559 aa4.06□□□□□ -1.76
USP16-205ENST00000474835 KRT1P04264 644 aa4.06□□□□□ -1.76
USP16-205ENST00000474835 RPS17P08708 135 aaKnown RBP4.06□□□□□ -1.76
USP16-205ENST00000474835 NCF1P14598 390 aaPredicted RBP4.06□□□□□ -1.76
USP16-205ENST00000474835 ALAS2P22557 587 aa4.06□□□□□ -1.76
USP16-205ENST00000474835 CYP2F1P24903 491 aa4.06□□□□□ -1.76
USP16-205ENST00000474835 CLCN3P51790 818 aa4.06□□□□□ -1.76
USP16-205ENST00000474835 PKNOX1P55347 436 aa4.06□□□□□ -1.76
USP16-205ENST00000474835 ADAM17P78536 824 aa4.06□□□□□ -1.76
USP16-205ENST00000474835 FAPQ12884 760 aa4.06□□□□□ -1.76
USP16-205ENST00000474835 ITGADQ13349 1161 aa4.06□□□□□ -1.76
USP16-205ENST00000474835 CLCA4Q14CN2 919 aa4.06□□□□□ -1.76
USP16-205ENST00000474835 CLLU1Q5K131 121 aa4.06□□□□□ -1.76
USP16-205ENST00000474835 MFSD4BQ5TF39 518 aa4.06□□□□□ -1.76
USP16-205ENST00000474835 ATF7IP2Q5U623 682 aa4.06□□□□□ -1.76
USP16-205ENST00000474835 FCRLBQ6BAA4 426 aa4.06□□□□□ -1.76
USP16-205ENST00000474835 SDE2Q6IQ49 451 aa4.06□□□□□ -1.76
USP16-205ENST00000474835 SHQ1Q6PI26 577 aaKnown RBP4.06□□□□□ -1.76
USP16-205ENST00000474835 THAP5Q7Z6K1 395 aa4.06□□□□□ -1.76
USP16-205ENST00000474835 MRGPREQ86SM8 312 aa4.06□□□□□ -1.76
USP16-205ENST00000474835 CDR2LQ86X02 465 aaPredicted RBP4.06□□□□□ -1.76
USP16-205ENST00000474835 LAS2Q8IYD9 372 aa4.06□□□□□ -1.76
USP16-205ENST00000474835 LIX1Q8N485 282 aa4.06□□□□□ -1.76
USP16-205ENST00000474835 PLA2G15Q8NCC3 412 aa4.06□□□□□ -1.76
USP16-205ENST00000474835 OR5B17Q8NGF7 314 aa4.06□□□□□ -1.76
USP16-205ENST00000474835 CALML6Q8TD86 181 aa4.06□□□□□ -1.76
USP16-205ENST00000474835 SLC35F5Q8WV83 523 aa4.06□□□□□ -1.76
USP16-205ENST00000474835 CERS2Q96G23 380 aa4.06□□□□□ -1.76
USP16-205ENST00000474835 ZNF560Q96MR9 790 aa4.06□□□□□ -1.76
USP16-205ENST00000474835 SLC39A3Q9BRY0 314 aa4.06□□□□□ -1.76
USP16-205ENST00000474835 SPNS1Q9H2V7 528 aa4.06□□□□□ -1.76
USP16-205ENST00000474835 IFT122Q9HBG6 1241 aa4.06□□□□□ -1.76
USP16-205ENST00000474835 POPDC3Q9HBV1 291 aa4.06□□□□□ -1.76
USP16-205ENST00000474835 POLMQ9NP87 494 aaPredicted RBP4.06□□□□□ -1.76
USP16-205ENST00000474835 SERHLQ9NQF3 203 aa4.06□□□□□ -1.76
USP16-205ENST00000474835 CHRAC1Q9NRG0 131 aa4.06□□□□□ -1.76
USP16-205ENST00000474835 SIRT5Q9NXA8 310 aa4.06□□□□□ -1.76
USP16-205ENST00000474835 MRPL39Q9NYK5 338 aaKnown RBP4.06□□□□□ -1.76
USP16-205ENST00000474835 TXNDC16Q9P2K2 825 aa4.06□□□□□ -1.76
USP16-205ENST00000474835 PSORS1C1Q9UIG5 152 aa4.06□□□□□ -1.76
USP16-205ENST00000474835 DAPK2Q9UIK4 370 aa4.06□□□□□ -1.76
USP16-205ENST00000474835 GABRQQ9UN88 632 aa4.06□□□□□ -1.76
USP16-205ENST00000474835 KCNH4Q9UQ05 1017 aa4.06□□□□□ -1.76
USP16-205ENST00000474835 TSC22D4Q9Y3Q8 395 aa4.06□□□□□ -1.76
USP16-205ENST00000474835 A0A0A0MRY4 1105 aa4.06□□□□□ -1.76
USP16-205ENST00000474835 DHRS12A0PJE2 317 aa4.06□□□□□ -1.76
USP16-205ENST00000474835 PQLC2LA1A4F0 135 aa4.06□□□□□ -1.76
USP16-205ENST00000474835 ARRDC5A6NEK1 342 aa4.06□□□□□ -1.76
USP16-205ENST00000474835 B4DXG7 233 aa4.06□□□□□ -1.76
USP16-205ENST00000474835 NRP2O60462 931 aa4.06□□□□□ -1.76
USP16-205ENST00000474835 AP2A1O95782 977 aa4.06□□□□□ -1.76
USP16-205ENST00000474835 C2P06681 752 aa4.06□□□□□ -1.76
USP16-205ENST00000474835 RRASP10301 218 aa4.06□□□□□ -1.76
USP16-205ENST00000474835 ITGB6P18564 788 aa4.06□□□□□ -1.76
USP16-205ENST00000474835 AGXTP21549 392 aa4.06□□□□□ -1.76
USP16-205ENST00000474835 RBL1P28749 1068 aa4.06□□□□□ -1.76
USP16-205ENST00000474835 TGFBR1P36897 503 aa4.06□□□□□ -1.76
USP16-205ENST00000474835 PER3P56645 1201 aa4.06□□□□□ -1.76
USP16-205ENST00000474835 GTF2IP78347 998 aa4.06□□□□□ -1.76
USP16-205ENST00000474835 GRAPQ13588 217 aa4.06□□□□□ -1.76
USP16-205ENST00000474835 ZNF273Q14593 569 aa4.06□□□□□ -1.76
USP16-205ENST00000474835 SSX1Q16384 188 aa4.06□□□□□ -1.76
USP16-205ENST00000474835 AMHR2Q16671 573 aa4.06□□□□□ -1.76
USP16-205ENST00000474835 FAM187BQ17R55 369 aa4.06□□□□□ -1.76
USP16-205ENST00000474835 ZNF678Q5SXM1 525 aa4.06□□□□□ -1.76
USP16-205ENST00000474835 SEL1L3Q68CR1 1132 aa4.06□□□□□ -1.76
USP16-205ENST00000474835 ANKS6Q68DC2 871 aa4.06□□□□□ -1.76
USP16-205ENST00000474835 CRTC3Q6UUV7 619 aa4.06□□□□□ -1.76
USP16-205ENST00000474835 LCLAT1Q6UWP7 414 aa4.06□□□□□ -1.76
USP16-205ENST00000474835 ABHD15Q6UXT9 468 aa4.06□□□□□ -1.76
USP16-205ENST00000474835 PTAR1Q7Z6K3 402 aaPredicted RBP4.06□□□□□ -1.76
USP16-205ENST00000474835 CYP4Z1Q86W10 505 aa4.06□□□□□ -1.76
USP16-205ENST00000474835 TMC8Q8IU68 726 aa4.06□□□□□ -1.76
USP16-205ENST00000474835 ZNF683Q8IZ20 524 aa4.06□□□□□ -1.76
USP16-205ENST00000474835 CCNYL1Q8N7R7 359 aa4.06□□□□□ -1.76
USP16-205ENST00000474835 ARL10Q8N8L6 244 aa4.06□□□□□ -1.76
USP16-205ENST00000474835 BPIFB6Q8NFQ5 453 aa4.06□□□□□ -1.76
USP16-205ENST00000474835 OR8J3Q8NGG0 315 aa4.06□□□□□ -1.76
USP16-205ENST00000474835 IL31RAQ8NI17 732 aa4.06□□□□□ -1.76
USP16-205ENST00000474835 GRAPLQ8TC17 118 aaPredicted RBP4.06□□□□□ -1.76
USP16-205ENST00000474835 SH3RF2Q8TEC5 729 aa4.06□□□□□ -1.76
USP16-205ENST00000474835 POP5Q969H6 163 aaKnown RBP4.06□□□□□ -1.76
USP16-205ENST00000474835 LRRC58Q96CX6 371 aa4.06□□□□□ -1.76
USP16-205ENST00000474835 TMCO6Q96DC7 493 aa4.06□□□□□ -1.76
USP16-205ENST00000474835 C8orf48Q96LL4 319 aa4.06□□□□□ -1.76
USP16-205ENST00000474835 CCDC17Q96LX7 622 aa4.06□□□□□ -1.76
USP16-205ENST00000474835 SPATA13Q96N96 652 aa4.06□□□□□ -1.76
USP16-205ENST00000474835 MCEEQ96PE7 176 aa4.06□□□□□ -1.76
USP16-205ENST00000474835 SLC2A13Q96QE2 648 aa4.06□□□□□ -1.76
USP16-205ENST00000474835 MRPL57Q9BQC6 102 aaKnown RBP4.06□□□□□ -1.76
USP16-205ENST00000474835 EGLN1Q9GZT9 426 aa4.06□□□□□ -1.76
USP16-205ENST00000474835 SMYD3Q9H7B4 428 aa4.06□□□□□ -1.76
USP16-205ENST00000474835 MARCH7Q9H992 704 aa4.06□□□□□ -1.76
USP16-205ENST00000474835 UCK1Q9HA47 277 aa4.06□□□□□ -1.76
USP16-205ENST00000474835 ACSS2Q9NR19 701 aa4.06□□□□□ -1.76
USP16-205ENST00000474835 ADGRE2Q9UHX3 823 aa4.06□□□□□ -1.76
USP16-205ENST00000474835 ING1Q9UK53 422 aaPredicted RBP4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms