RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 PIM3Q86V86 326 aa10.14□□□□□ -0.79
PRPF38A-202ENST00000474048 C11orf74Q86VG3 221 aa10.14□□□□□ -0.79
PRPF38A-202ENST00000474048 CLDN19Q8N6F1 224 aa10.14□□□□□ -0.79
PRPF38A-202ENST00000474048 SIDT2Q8NBJ9 832 aaKnown RBP10.14□□□□□ -0.79
PRPF38A-202ENST00000474048 TP53I13Q8NBR0 393 aaPredicted RBP10.14□□□□□ -0.79
PRPF38A-202ENST00000474048 FAM174AQ8TBP5 190 aa10.14□□□□□ -0.79
PRPF38A-202ENST00000474048 TCP10LQ8TDR4 215 aa10.14□□□□□ -0.79
PRPF38A-202ENST00000474048 FOXJ1Q92949 421 aa10.14□□□□□ -0.79
PRPF38A-202ENST00000474048 ISL2Q96A47 359 aa10.14□□□□□ -0.79
PRPF38A-202ENST00000474048 TMEM159Q96B96 161 aa10.14□□□□□ -0.79
PRPF38A-202ENST00000474048 SKA1Q96BD8 255 aa10.14□□□□□ -0.79
PRPF38A-202ENST00000474048 LINGO1Q96FE5 620 aa10.14□□□□□ -0.79
PRPF38A-202ENST00000474048 FOPNLQ96NB1 174 aa10.14□□□□□ -0.79
PRPF38A-202ENST00000474048 FAM111AQ96PZ2 611 aa10.14□□□□□ -0.79
PRPF38A-202ENST00000474048 P2RY12Q9H244 342 aa10.14□□□□□ -0.79
PRPF38A-202ENST00000474048 FZD3Q9NPG1 666 aa10.14□□□□□ -0.79
PRPF38A-202ENST00000474048 LATS2Q9NRM7 1088 aa10.14□□□□□ -0.79
PRPF38A-202ENST00000474048 AASDHPPTQ9NRN7 309 aa10.14□□□□□ -0.79
PRPF38A-202ENST00000474048 WSB2Q9NYS7 404 aaPredicted RBP10.14□□□□□ -0.79
PRPF38A-202ENST00000474048 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.14□□□□□ -0.79
PRPF38A-202ENST00000474048 FAM8A1Q9UBU6 413 aa10.14□□□□□ -0.79
PRPF38A-202ENST00000474048 EBF1Q9UH73 591 aa10.14□□□□□ -0.79
PRPF38A-202ENST00000474048 XIRP2A4UGR9 3374 aa10.14□□□□□ -0.79
PRPF38A-202ENST00000474048 IGLV3-16A0A075B6K0 115 aa10.13□□□□□ -0.79
PRPF38A-202ENST00000474048 IGHV1OR15-9A0A0B4J2B8 117 aa10.13□□□□□ -0.79
PRPF38A-202ENST00000474048 SYCE1LA8MT33 242 aa10.13□□□□□ -0.79
PRPF38A-202ENST00000474048 K7ESM1 405 aa10.13□□□□□ -0.79
PRPF38A-202ENST00000474048 EIF3FO00303 357 aaPredicted RBP10.13□□□□□ -0.79
PRPF38A-202ENST00000474048 SMIM24O75264 130 aa10.13□□□□□ -0.79
PRPF38A-202ENST00000474048 SLC35E2BP0CK96 405 aa10.13□□□□□ -0.79
PRPF38A-202ENST00000474048 CBSLP0DN79 551 aa10.13□□□□□ -0.79
PRPF38A-202ENST00000474048 C7P10643 843 aa10.13□□□□□ -0.79
PRPF38A-202ENST00000474048 MYL2P10916 166 aa10.13□□□□□ -0.79
PRPF38A-202ENST00000474048 ENO3P13929 434 aaPredicted RBP10.13□□□□□ -0.79
PRPF38A-202ENST00000474048 ZNF37AP17032 561 aaPredicted RBP10.13□□□□□ -0.79
PRPF38A-202ENST00000474048 CD9P21926 228 aa10.13□□□□□ -0.79
PRPF38A-202ENST00000474048 CBSP35520 551 aa10.13□□□□□ -0.79
PRPF38A-202ENST00000474048 MAGEA12P43365 314 aa10.13□□□□□ -0.79
PRPF38A-202ENST00000474048 RABIFP47224 123 aa10.13□□□□□ -0.79
PRPF38A-202ENST00000474048 GLRBP48167 497 aa10.13□□□□□ -0.79
PRPF38A-202ENST00000474048 PRLHRP49683 370 aa10.13□□□□□ -0.79
PRPF38A-202ENST00000474048 SLC18A1P54219 525 aa10.13□□□□□ -0.79
PRPF38A-202ENST00000474048 IRX4P78413 519 aa10.13□□□□□ -0.79
PRPF38A-202ENST00000474048 PLOD1Q02809 727 aaPredicted RBP10.13□□□□□ -0.79
PRPF38A-202ENST00000474048 FZD5Q13467 585 aa10.13□□□□□ -0.79
PRPF38A-202ENST00000474048 ZNF460Q14592 562 aa10.13□□□□□ -0.79
PRPF38A-202ENST00000474048 PPM1JQ5JR12 505 aa10.13□□□□□ -0.79
PRPF38A-202ENST00000474048 TMEM31Q5JXX7 168 aa10.13□□□□□ -0.79
PRPF38A-202ENST00000474048 CTSL3PQ5NE16 218 aa10.13□□□□□ -0.79
PRPF38A-202ENST00000474048 ZNF549Q6P9A3 640 aa10.13□□□□□ -0.79
PRPF38A-202ENST00000474048 LVRNQ6Q4G3 990 aa10.13□□□□□ -0.79
PRPF38A-202ENST00000474048 CRTC3Q6UUV7 619 aa10.13□□□□□ -0.79
PRPF38A-202ENST00000474048 MICALCLQ6ZW33 695 aa10.13□□□□□ -0.79
PRPF38A-202ENST00000474048 TRIM74Q86UV6 250 aa10.13□□□□□ -0.79
PRPF38A-202ENST00000474048 LRRTM4Q86VH4 590 aa10.13□□□□□ -0.79
PRPF38A-202ENST00000474048 GALNT13Q8IUC8 556 aa10.13□□□□□ -0.79
PRPF38A-202ENST00000474048 CEP97Q8IW35 865 aa10.13□□□□□ -0.79
PRPF38A-202ENST00000474048 RGL4Q8IZJ4 473 aa10.13□□□□□ -0.79
PRPF38A-202ENST00000474048 PLA2G15Q8NCC3 412 aa10.13□□□□□ -0.79
PRPF38A-202ENST00000474048 ARMC2Q8NEN0 867 aa10.13□□□□□ -0.79
PRPF38A-202ENST00000474048 RDH11Q8TC12 318 aa10.13□□□□□ -0.79
PRPF38A-202ENST00000474048 LRRC8CQ8TDW0 803 aa10.13□□□□□ -0.79
PRPF38A-202ENST00000474048 KCTD4Q8WVF5 259 aa10.13□□□□□ -0.79
PRPF38A-202ENST00000474048 ASZ1Q8WWH4 475 aa10.13□□□□□ -0.79
PRPF38A-202ENST00000474048 RLN3Q8WXF3 142 aa10.13□□□□□ -0.79
PRPF38A-202ENST00000474048 CCDC126Q96EE4 140 aa10.13□□□□□ -0.79
PRPF38A-202ENST00000474048 SGF29Q96ES7 293 aa10.13□□□□□ -0.79
PRPF38A-202ENST00000474048 BIRC8Q96P09 236 aa10.13□□□□□ -0.79
PRPF38A-202ENST00000474048 OLFM1Q99784 485 aa10.13□□□□□ -0.79
PRPF38A-202ENST00000474048 CCM2Q9BSQ5 444 aa10.13□□□□□ -0.79
PRPF38A-202ENST00000474048 MCMBPQ9BTE3 642 aa10.13□□□□□ -0.79
PRPF38A-202ENST00000474048 APOOQ9BUR5 198 aa10.13□□□□□ -0.79
PRPF38A-202ENST00000474048 CAPS2Q9BXY5 557 aa10.13□□□□□ -0.79
PRPF38A-202ENST00000474048 TRIM54Q9BYV2 358 aa10.13□□□□□ -0.79
PRPF38A-202ENST00000474048 MRPL46Q9H2W6 279 aaKnown RBP10.13□□□□□ -0.79
PRPF38A-202ENST00000474048 EPHX3Q9H6B9 360 aa10.13□□□□□ -0.79
PRPF38A-202ENST00000474048 RMI1Q9H9A7 625 aa10.13□□□□□ -0.79
PRPF38A-202ENST00000474048 CD320Q9NPF0 282 aa10.13□□□□□ -0.79
PRPF38A-202ENST00000474048 ZNHIT2Q9UHR6 403 aa10.13□□□□□ -0.79
PRPF38A-202ENST00000474048 TSR3Q9UJK0 312 aaKnown RBP10.13□□□□□ -0.79
PRPF38A-202ENST00000474048 RNF112Q9ULX5 631 aa10.13□□□□□ -0.79
PRPF38A-202ENST00000474048 DHRS7Q9Y394 339 aa10.13□□□□□ -0.79
PRPF38A-202ENST00000474048 OR1A2Q9Y585 309 aa10.13□□□□□ -0.79
PRPF38A-202ENST00000474048 OAS3Q9Y6K5 1087 aaKnown RBP10.13□□□□□ -0.79
PRPF38A-202ENST00000474048 CCDC189A1A4V9 331 aa10.12□□□□□ -0.79
PRPF38A-202ENST00000474048 HMX2A2RU54 273 aa10.12□□□□□ -0.79
PRPF38A-202ENST00000474048 IQCF5A8MTL0 148 aa10.12□□□□□ -0.79
PRPF38A-202ENST00000474048 BTN3A1O00481 513 aa10.12□□□□□ -0.79
PRPF38A-202ENST00000474048 LIN7AO14910 233 aaPredicted RBP10.12□□□□□ -0.79
PRPF38A-202ENST00000474048 KMOO15229 486 aa10.12□□□□□ -0.79
PRPF38A-202ENST00000474048 TYROBPO43914 113 aa10.12□□□□□ -0.79
PRPF38A-202ENST00000474048 SNX2O60749 519 aa10.12□□□□□ -0.79
PRPF38A-202ENST00000474048 H2AFYO75367 372 aaKnown RBP10.12□□□□□ -0.79
PRPF38A-202ENST00000474048 GM2AP17900 193 aa10.12□□□□□ -0.79
PRPF38A-202ENST00000474048 TFEBP19484 476 aa10.12□□□□□ -0.79
PRPF38A-202ENST00000474048 MAP4P27816 1152 aaKnown RBP10.12□□□□□ -0.79
PRPF38A-202ENST00000474048 IGFALSP35858 605 aa10.12□□□□□ -0.79
PRPF38A-202ENST00000474048 KIAA1024LP59773 190 aa10.12□□□□□ -0.79
PRPF38A-202ENST00000474048 YPEL5P62699 121 aa10.12□□□□□ -0.79
PRPF38A-202ENST00000474048 IRF9Q00978 393 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms