RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 NR6A1Q15406 480 aa5.04□□□□□ -1.6
SNRNP40-204ENST00000474025 SYCP1Q15431 976 aa5.04□□□□□ -1.6
SNRNP40-204ENST00000474025 SMTNL2Q2TAL5 461 aa5.04□□□□□ -1.6
SNRNP40-204ENST00000474025 MARC1Q5VT66 337 aa5.04□□□□□ -1.6
SNRNP40-204ENST00000474025 CACHD1Q5VU97 1274 aa5.04□□□□□ -1.6
SNRNP40-204ENST00000474025 SLC6A19Q695T7 634 aa5.04□□□□□ -1.6
SNRNP40-204ENST00000474025 PLEKHA7Q6IQ23 1121 aa5.04□□□□□ -1.6
SNRNP40-204ENST00000474025 ACAD10Q6JQN1 1059 aa5.04□□□□□ -1.6
SNRNP40-204ENST00000474025 PWWP2BQ6NUJ5 590 aa5.04□□□□□ -1.6
SNRNP40-204ENST00000474025 MRPL14Q6P1L8 145 aaKnown RBP5.04□□□□□ -1.6
SNRNP40-204ENST00000474025 FAM199XQ6PEV8 388 aaPredicted RBP5.04□□□□□ -1.6
SNRNP40-204ENST00000474025 TMCO3Q6UWJ1 677 aa5.04□□□□□ -1.6
SNRNP40-204ENST00000474025 ZNF517Q6ZMY9 492 aaPredicted RBP5.04□□□□□ -1.6
SNRNP40-204ENST00000474025 FAM92BQ6ZTR7 304 aa5.04□□□□□ -1.6
SNRNP40-204ENST00000474025 POLNQ7Z5Q5 900 aa5.04□□□□□ -1.6
SNRNP40-204ENST00000474025 TRIM48Q8IWZ4 208 aa5.04□□□□□ -1.6
SNRNP40-204ENST00000474025 NDUFAF2Q8N183 169 aa5.04□□□□□ -1.6
SNRNP40-204ENST00000474025 BBS5Q8N3I7 341 aa5.04□□□□□ -1.6
SNRNP40-204ENST00000474025 TEX26Q8N6G2 289 aa5.04□□□□□ -1.6
SNRNP40-204ENST00000474025 RBMXL3Q8N7X1 1067 aaKnown RBP5.04□□□□□ -1.6
SNRNP40-204ENST00000474025 FDCSPQ8NFU4 85 aa5.04□□□□□ -1.6
SNRNP40-204ENST00000474025 ADAMTS17Q8TE56 1095 aa5.04□□□□□ -1.6
SNRNP40-204ENST00000474025 NSMCE1Q8WV22 266 aa5.04□□□□□ -1.6
SNRNP40-204ENST00000474025 PNPLA2Q96AD5 504 aa5.04□□□□□ -1.6
SNRNP40-204ENST00000474025 C19orf60Q96EN9 201 aa5.04□□□□□ -1.6
SNRNP40-204ENST00000474025 ZDHHC12Q96GR4 267 aa5.04□□□□□ -1.6
SNRNP40-204ENST00000474025 SLC41A2Q96JW4 573 aa5.04□□□□□ -1.6
SNRNP40-204ENST00000474025 FCRL4Q96PJ5 515 aa5.04□□□□□ -1.6
SNRNP40-204ENST00000474025 CSPG4P5Q96PW8 444 aa5.04□□□□□ -1.6
SNRNP40-204ENST00000474025 LYSMD1Q96S90 227 aa5.04□□□□□ -1.6
SNRNP40-204ENST00000474025 SYT11Q9BT88 431 aa5.04□□□□□ -1.6
SNRNP40-204ENST00000474025 NUDT9Q9BW91 350 aa5.04□□□□□ -1.6
SNRNP40-204ENST00000474025 TDRD1Q9BXT4 1180 aaKnown RBP5.04□□□□□ -1.6
SNRNP40-204ENST00000474025 RAB33BQ9H082 229 aa5.04□□□□□ -1.6
SNRNP40-204ENST00000474025 OR2AG1Q9H205 316 aa5.04□□□□□ -1.6
SNRNP40-204ENST00000474025 OSGEPL1Q9H4B0 414 aa5.04□□□□□ -1.6
SNRNP40-204ENST00000474025 ZWILCHQ9H900 591 aa5.04□□□□□ -1.6
SNRNP40-204ENST00000474025 PDE7BQ9NP56 450 aa5.04□□□□□ -1.6
SNRNP40-204ENST00000474025 ARFGAP3Q9NP61 516 aa5.04□□□□□ -1.6
SNRNP40-204ENST00000474025 SLAMF7Q9NQ25 335 aa5.04□□□□□ -1.6
SNRNP40-204ENST00000474025 ACSS2Q9NR19 701 aa5.04□□□□□ -1.6
SNRNP40-204ENST00000474025 KLC4Q9NSK0 619 aa5.04□□□□□ -1.6
SNRNP40-204ENST00000474025 POT1Q9NUX5 634 aa5.04□□□□□ -1.6
SNRNP40-204ENST00000474025 PARVAQ9NVD7 372 aa5.04□□□□□ -1.6
SNRNP40-204ENST00000474025 SEMA5BQ9P283 1151 aa5.04□□□□□ -1.6
SNRNP40-204ENST00000474025 ATXN10Q9UBB4 475 aa5.04□□□□□ -1.6
SNRNP40-204ENST00000474025 SLC23A2Q9UGH3 650 aa5.04□□□□□ -1.6
SNRNP40-204ENST00000474025 DNPEPQ9ULA0 475 aa5.04□□□□□ -1.6
SNRNP40-204ENST00000474025 SSU72P8A0A1W2PR75 194 aa5.03□□□□□ -1.6
SNRNP40-204ENST00000474025 HEATR9A2RTY3 570 aa5.03□□□□□ -1.6
SNRNP40-204ENST00000474025 RGSL1A5PLK6 1076 aa5.03□□□□□ -1.6
SNRNP40-204ENST00000474025 TMEM191CA6NGB0 347 aa5.03□□□□□ -1.6
SNRNP40-204ENST00000474025 PDZK1P1A8MUH7 402 aa5.03□□□□□ -1.6
SNRNP40-204ENST00000474025 GPR89AB7ZAQ6 455 aa5.03□□□□□ -1.6
SNRNP40-204ENST00000474025 CHUKO15111 745 aa5.03□□□□□ -1.6
SNRNP40-204ENST00000474025 HNRNPRO43390 633 aaKnown RBP5.03□□□□□ -1.6
SNRNP40-204ENST00000474025 KRT86O43790 486 aa5.03□□□□□ -1.6
SNRNP40-204ENST00000474025 CPNE3O75131 537 aaKnown RBP5.03□□□□□ -1.6
SNRNP40-204ENST00000474025 RNF8O76064 485 aa5.03□□□□□ -1.6
SNRNP40-204ENST00000474025 MTA2O94776 668 aa5.03□□□□□ -1.6
SNRNP40-204ENST00000474025 CBX6O95503 412 aa5.03□□□□□ -1.6
SNRNP40-204ENST00000474025 JCHAINP01591 159 aa5.03□□□□□ -1.6
SNRNP40-204ENST00000474025 EBLN1P0CF75 366 aa5.03□□□□□ -1.6
SNRNP40-204ENST00000474025 GPR89BP0CG08 455 aa5.03□□□□□ -1.6
SNRNP40-204ENST00000474025 PRF1P14222 555 aa5.03□□□□□ -1.6
SNRNP40-204ENST00000474025 LPOP22079 712 aaPredicted RBP5.03□□□□□ -1.6
SNRNP40-204ENST00000474025 RPL10P27635 214 aaKnown RBP5.03□□□□□ -1.6
SNRNP40-204ENST00000474025 SERPINB6P35237 376 aa5.03□□□□□ -1.6
SNRNP40-204ENST00000474025 PCK1P35558 622 aa5.03□□□□□ -1.6
SNRNP40-204ENST00000474025 ARL4AP40617 200 aa5.03□□□□□ -1.6
SNRNP40-204ENST00000474025 WDR4P57081 412 aaKnown RBP5.03□□□□□ -1.6
SNRNP40-204ENST00000474025 RPL26P61254 145 aaKnown RBP5.03□□□□□ -1.6
SNRNP40-204ENST00000474025 UBE2HP62256 183 aa5.03□□□□□ -1.6
SNRNP40-204ENST00000474025 RPS15P62841 145 aaKnown RBP5.03□□□□□ -1.6
SNRNP40-204ENST00000474025 DSC2Q02487 901 aa5.03□□□□□ -1.6
SNRNP40-204ENST00000474025 GPS2Q13227 327 aa5.03□□□□□ -1.6
SNRNP40-204ENST00000474025 SEPT7Q16181 437 aaKnown RBP5.03□□□□□ -1.6
SNRNP40-204ENST00000474025 INSCQ1MX18 579 aa5.03□□□□□ -1.6
SNRNP40-204ENST00000474025 PLA2G4EQ3MJ16 856 aa5.03□□□□□ -1.6
SNRNP40-204ENST00000474025 TDRD12Q587J7 1177 aaKnown RBP5.03□□□□□ -1.6
SNRNP40-204ENST00000474025 C4orf48Q5BLP8 95 aa5.03□□□□□ -1.6
SNRNP40-204ENST00000474025 ZRANB3Q5FWF4 1079 aa5.03□□□□□ -1.6
SNRNP40-204ENST00000474025 ZNF569Q5MCW4 686 aa5.03□□□□□ -1.6
SNRNP40-204ENST00000474025 FKBP15Q5T1M5 1219 aa5.03□□□□□ -1.6
SNRNP40-204ENST00000474025 ZNF648Q5T619 568 aaPredicted RBP5.03□□□□□ -1.6
SNRNP40-204ENST00000474025 AGAP9Q5VTM2 703 aa5.03□□□□□ -1.6
SNRNP40-204ENST00000474025 FAM69BQ5VUD6 431 aa5.03□□□□□ -1.6
SNRNP40-204ENST00000474025 CDKAL1Q5VV42 579 aa5.03□□□□□ -1.6
SNRNP40-204ENST00000474025 IRGCQ6NXR0 463 aa5.03□□□□□ -1.6
SNRNP40-204ENST00000474025 CYB5D1Q6P9G0 228 aa5.03□□□□□ -1.6
SNRNP40-204ENST00000474025 CRTC3Q6UUV7 619 aa5.03□□□□□ -1.6
SNRNP40-204ENST00000474025 ABRAXAS1Q6UWZ7 409 aa5.03□□□□□ -1.6
SNRNP40-204ENST00000474025 WASH2PQ6VEQ5 465 aa5.03□□□□□ -1.6
SNRNP40-204ENST00000474025 CERS6Q6ZMG9 384 aa5.03□□□□□ -1.6
SNRNP40-204ENST00000474025 ADGRG6Q86SQ4 1221 aa5.03□□□□□ -1.6
SNRNP40-204ENST00000474025 ZC3H18Q86VM9 953 aaKnown RBP5.03□□□□□ -1.6
SNRNP40-204ENST00000474025 HPS6Q86YV9 775 aa5.03□□□□□ -1.6
SNRNP40-204ENST00000474025 ZNF547Q8IVP9 402 aa5.03□□□□□ -1.6
SNRNP40-204ENST00000474025 RBM12BQ8IXT5 1001 aaKnown RBP5.03□□□□□ -1.6
SNRNP40-204ENST00000474025 SRRM1Q8IYB3 904 aaKnown RBP5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms