RNA–Protein interactions for RNA: ENST00000473778.5

C9orf3-214, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 2,396 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-214ENST00000473778 ST14Q9Y5Y6 855 aa10.83□□□□□ -0.68
C9orf3-214ENST00000473778 STAMBPO95630 424 aa10.83□□□□□ -0.68
C9orf3-214ENST00000473778 CR2P20023 1033 aa10.83□□□□□ -0.68
C9orf3-214ENST00000473778 POLR2IP36954 125 aaKnown RBP10.83□□□□□ -0.68
C9orf3-214ENST00000473778 CD97P48960 835 aa10.83□□□□□ -0.68
C9orf3-214ENST00000473778 POLR2JP52435 117 aaKnown RBP10.83□□□□□ -0.68
C9orf3-214ENST00000473778 KCNK10P57789 538 aa10.83□□□□□ -0.68
C9orf3-214ENST00000473778 YBEYP58557 167 aaPredicted RBP10.83□□□□□ -0.68
C9orf3-214ENST00000473778 ERVPABLB-1P60509 514 aa10.83□□□□□ -0.68
C9orf3-214ENST00000473778 NFE2Q16621 373 aaPredicted RBP10.83□□□□□ -0.68
C9orf3-214ENST00000473778 CTXN3Q4LDR2 81 aa10.83□□□□□ -0.68
C9orf3-214ENST00000473778 HABP4Q5JVS0 413 aaKnown RBP10.83□□□□□ -0.68
C9orf3-214ENST00000473778 C6orf136Q5SQH8 315 aa10.83□□□□□ -0.68
C9orf3-214ENST00000473778 GPR180Q86V85 440 aa10.83□□□□□ -0.68
C9orf3-214ENST00000473778 ARL10Q8N8L6 244 aa10.83□□□□□ -0.68
C9orf3-214ENST00000473778 MAGEE2Q8TD90 523 aaPredicted RBP10.83□□□□□ -0.68
C9orf3-214ENST00000473778 RMDN1Q96DB5 314 aa10.83□□□□□ -0.68
C9orf3-214ENST00000473778 HSPBAP1Q96EW2 488 aa10.83□□□□□ -0.68
C9orf3-214ENST00000473778 SEPT5Q99719 369 aaPredicted RBP10.83□□□□□ -0.68
C9orf3-214ENST00000473778 HGH1Q9BTY7 390 aa10.83□□□□□ -0.68
C9orf3-214ENST00000473778 C1QTNF3Q9BXJ4 246 aa10.83□□□□□ -0.68
C9orf3-214ENST00000473778 NTN4Q9HB63 628 aa10.83□□□□□ -0.68
C9orf3-214ENST00000473778 HACD3Q9P035 362 aa10.83□□□□□ -0.68
C9orf3-214ENST00000473778 FKBPLQ9UIM3 349 aa10.83□□□□□ -0.68
C9orf3-214ENST00000473778 ZFP37Q9Y6Q3 630 aaPredicted RBP10.83□□□□□ -0.68
C9orf3-214ENST00000473778 CCDC154A6NI56 674 aa10.82□□□□□ -0.68
C9orf3-214ENST00000473778 UPK1AO00322 258 aa10.82□□□□□ -0.68
C9orf3-214ENST00000473778 TLR5O60602 858 aa10.82□□□□□ -0.68
C9orf3-214ENST00000473778 CRCPO75575 148 aa10.82□□□□□ -0.68
C9orf3-214ENST00000473778 SLC22A3O75751 556 aa10.82□□□□□ -0.68
C9orf3-214ENST00000473778 PRAMEF12O95522 483 aa10.82□□□□□ -0.68
C9orf3-214ENST00000473778 CD247P20963 164 aa10.82□□□□□ -0.68
C9orf3-214ENST00000473778 CA5AP35218 305 aa10.82□□□□□ -0.68
C9orf3-214ENST00000473778 MAPKAPK2P49137 400 aa10.82□□□□□ -0.68
C9orf3-214ENST00000473778 ENTPD1P49961 510 aa10.82□□□□□ -0.68
C9orf3-214ENST00000473778 OXCT1P55809 520 aa10.82□□□□□ -0.68
C9orf3-214ENST00000473778 HUNKP57058 714 aa10.82□□□□□ -0.68
C9orf3-214ENST00000473778 RAD51Q06609 339 aa10.82□□□□□ -0.68
C9orf3-214ENST00000473778 FOXM1Q08050 763 aa10.82□□□□□ -0.68
C9orf3-214ENST00000473778 DCTN2Q13561 401 aaKnown RBP10.82□□□□□ -0.68
C9orf3-214ENST00000473778 FAM171A1Q5VUB5 890 aa10.82□□□□□ -0.68
C9orf3-214ENST00000473778 KLHL35Q6PF15 583 aa10.82□□□□□ -0.68
C9orf3-214ENST00000473778 DLEU7Q6UYE1 221 aa10.82□□□□□ -0.68
C9orf3-214ENST00000473778 RNF19BQ6ZMZ0 732 aa10.82□□□□□ -0.68
C9orf3-214ENST00000473778 SFRP1Q8N474 314 aa10.82□□□□□ -0.68
C9orf3-214ENST00000473778 FAM86B1Q8N7N1 296 aa10.82□□□□□ -0.68
C9orf3-214ENST00000473778 PAPD5Q8NDF8 572 aaKnown RBP10.82□□□□□ -0.68
C9orf3-214ENST00000473778 GIPC2Q8TF65 315 aa10.82□□□□□ -0.68
C9orf3-214ENST00000473778 SOCS4Q8WXH5 440 aa10.82□□□□□ -0.68
C9orf3-214ENST00000473778 BIRC7Q96CA5 298 aa10.82□□□□□ -0.68
C9orf3-214ENST00000473778 EID2BQ96D98 161 aa10.82□□□□□ -0.68
C9orf3-214ENST00000473778 PSKH2Q96QS6 385 aa10.82□□□□□ -0.68
C9orf3-214ENST00000473778 C9orf16Q9BUW7 83 aa10.82□□□□□ -0.68
C9orf3-214ENST00000473778 SEZ6LQ9BYH1 1024 aa10.82□□□□□ -0.68
C9orf3-214ENST00000473778 CARS2Q9HA77 564 aaKnown RBP10.82□□□□□ -0.68
C9orf3-214ENST00000473778 SYTL2Q9HCH5 934 aa10.82□□□□□ -0.68
C9orf3-214ENST00000473778 FADS3Q9Y5Q0 445 aa10.82□□□□□ -0.68
C9orf3-214ENST00000473778 MTMR11A4FU01 709 aa10.82□□□□□ -0.68
C9orf3-214ENST00000473778 MOXD2PA6NHM9 499 aa10.82□□□□□ -0.68
C9orf3-214ENST00000473778 TSPAN3O60637 253 aa10.82□□□□□ -0.68
C9orf3-214ENST00000473778 F11P03951 625 aa10.82□□□□□ -0.68
C9orf3-214ENST00000473778 GPIP06744 558 aa10.82□□□□□ -0.68
C9orf3-214ENST00000473778 UROSP10746 265 aa10.82□□□□□ -0.68
C9orf3-214ENST00000473778 HOXB8P17481 243 aaPredicted RBP10.82□□□□□ -0.68
C9orf3-214ENST00000473778 MTPNP58546 118 aa10.82□□□□□ -0.68
C9orf3-214ENST00000473778 PLIN5Q00G26 463 aa10.82□□□□□ -0.68
C9orf3-214ENST00000473778 GNA12Q03113 381 aa10.82□□□□□ -0.68
C9orf3-214ENST00000473778 RBBP7Q16576 425 aa10.82□□□□□ -0.68
C9orf3-214ENST00000473778 FXNQ16595 210 aa10.82□□□□□ -0.68
C9orf3-214ENST00000473778 ANKDD1AQ495B1 522 aa10.82□□□□□ -0.68
C9orf3-214ENST00000473778 ZBED5Q49AG3 693 aa10.82□□□□□ -0.68
C9orf3-214ENST00000473778 CCSAPQ6IQ19 270 aaPredicted RBP10.82□□□□□ -0.68
C9orf3-214ENST00000473778 TMEM214Q6NUQ4 689 aaKnown RBP10.82□□□□□ -0.68
C9orf3-214ENST00000473778 TRAF7Q6Q0C0 670 aa10.82□□□□□ -0.68
C9orf3-214ENST00000473778 GLB1LQ6UWU2 654 aa10.82□□□□□ -0.68
C9orf3-214ENST00000473778 USP51Q70EK9 711 aa10.82□□□□□ -0.68
C9orf3-214ENST00000473778 GPR141Q7Z602 305 aa10.82□□□□□ -0.68
C9orf3-214ENST00000473778 RASAL3Q86YV0 1011 aa10.82□□□□□ -0.68
C9orf3-214ENST00000473778 DTWD1Q8N5C7 304 aa10.82□□□□□ -0.68
C9orf3-214ENST00000473778 SEPT8Q92599 483 aa10.82□□□□□ -0.68
C9orf3-214ENST00000473778 SGCDQ92629 289 aa10.82□□□□□ -0.68
C9orf3-214ENST00000473778 LINGO1Q96FE5 620 aa10.82□□□□□ -0.68
C9orf3-214ENST00000473778 PPM1MQ96MI6 270 aa10.82□□□□□ -0.68
C9orf3-214ENST00000473778 SPON2Q9BUD6 331 aa10.82□□□□□ -0.68
C9orf3-214ENST00000473778 TDRD1Q9BXT4 1180 aaKnown RBP10.82□□□□□ -0.68
C9orf3-214ENST00000473778 TRIM15Q9C019 465 aa10.82□□□□□ -0.68
C9orf3-214ENST00000473778 TLR8Q9NR97 1041 aaKnown RBP10.82□□□□□ -0.68
C9orf3-214ENST00000473778 THEGQ9P2T0 379 aa10.82□□□□□ -0.68
C9orf3-214ENST00000473778 ZNF639Q9UID6 485 aa10.82□□□□□ -0.68
C9orf3-214ENST00000473778 RIMKLBQ9ULI2 386 aa10.82□□□□□ -0.68
C9orf3-214ENST00000473778 A0A087WXM4 84 aa10.81□□□□□ -0.68
C9orf3-214ENST00000473778 TMEM189-UBE2V1I3L0A0 370 aa10.81□□□□□ -0.68
C9orf3-214ENST00000473778 STX16O14662 325 aa10.81□□□□□ -0.68
C9orf3-214ENST00000473778 CLOCKO15516 846 aa10.81□□□□□ -0.68
C9orf3-214ENST00000473778 SNX2O60749 519 aa10.81□□□□□ -0.68
C9orf3-214ENST00000473778 NDUFS3O75489 264 aa10.81□□□□□ -0.68
C9orf3-214ENST00000473778 GJB5O95377 273 aa10.81□□□□□ -0.68
C9orf3-214ENST00000473778 ATF6P18850 670 aa10.81□□□□□ -0.68
C9orf3-214ENST00000473778 PAX3P23760 479 aa10.81□□□□□ -0.68
C9orf3-214ENST00000473778 ELK4P28324 431 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms