RNA–Protein interactions for RNA: ENST00000473421.1

TRAF4-209, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-209ENST00000473421 ZNF185O15231 689 aa12.36□□□□□ -0.43
TRAF4-209ENST00000473421 CEACAM4O75871 244 aa12.36□□□□□ -0.43
TRAF4-209ENST00000473421 LCA5LO95447 670 aa12.36□□□□□ -0.43
TRAF4-209ENST00000473421 LDLRP01130 860 aa12.36□□□□□ -0.43
TRAF4-209ENST00000473421 JCHAINP01591 159 aa12.36□□□□□ -0.43
TRAF4-209ENST00000473421 GZMAP12544 262 aa12.36□□□□□ -0.43
TRAF4-209ENST00000473421 BPIP17213 487 aa12.36□□□□□ -0.43
TRAF4-209ENST00000473421 POU3F2P20265 443 aaPredicted RBP12.36□□□□□ -0.43
TRAF4-209ENST00000473421 RPL26P61254 145 aaKnown RBP12.36□□□□□ -0.43
TRAF4-209ENST00000473421 RAPSNQ13702 412 aa12.36□□□□□ -0.43
TRAF4-209ENST00000473421 ASIC2Q16515 512 aa12.36□□□□□ -0.43
TRAF4-209ENST00000473421 ZNF569Q5MCW4 686 aa12.36□□□□□ -0.43
TRAF4-209ENST00000473421 SLC6A19Q695T7 634 aa12.36□□□□□ -0.43
TRAF4-209ENST00000473421 ZNF517Q6ZMY9 492 aaPredicted RBP12.36□□□□□ -0.43
TRAF4-209ENST00000473421 RBM43Q6ZSC3 357 aaKnown RBP12.36□□□□□ -0.43
TRAF4-209ENST00000473421 B4GALNT4Q76KP1 1039 aa12.36□□□□□ -0.43
TRAF4-209ENST00000473421 MAMDC2Q7Z304 686 aaPredicted RBP12.36□□□□□ -0.43
TRAF4-209ENST00000473421 TMC3Q7Z5M5 1100 aa12.36□□□□□ -0.43
TRAF4-209ENST00000473421 TTC30BQ8N4P2 665 aa12.36□□□□□ -0.43
TRAF4-209ENST00000473421 SIDT2Q8NBJ9 832 aaKnown RBP12.36□□□□□ -0.43
TRAF4-209ENST00000473421 TSGA13Q96PP4 275 aa12.36□□□□□ -0.43
TRAF4-209ENST00000473421 NUP85Q9BW27 656 aa12.36□□□□□ -0.43
TRAF4-209ENST00000473421 THAP2Q9H0W7 228 aa12.36□□□□□ -0.43
TRAF4-209ENST00000473421 ISCUQ9H1K1 167 aa12.36□□□□□ -0.43
TRAF4-209ENST00000473421 CHST8Q9H2A9 424 aa12.36□□□□□ -0.43
TRAF4-209ENST00000473421 ACSS2Q9NR19 701 aa12.36□□□□□ -0.43
TRAF4-209ENST00000473421 FGF21Q9NSA1 209 aa12.36□□□□□ -0.43
TRAF4-209ENST00000473421 POT1Q9NUX5 634 aa12.36□□□□□ -0.43
TRAF4-209ENST00000473421 CUEDC1Q9NWM3 386 aaPredicted RBP12.36□□□□□ -0.43
TRAF4-209ENST00000473421 AIPL1Q9NZN9 384 aa12.36□□□□□ -0.43
TRAF4-209ENST00000473421 RARRES3Q9UL19 164 aa12.36□□□□□ -0.43
TRAF4-209ENST00000473421 PSMD13Q9UNM6 376 aa12.36□□□□□ -0.43
TRAF4-209ENST00000473421 RPL26L1Q9UNX3 145 aaKnown RBP12.36□□□□□ -0.43
TRAF4-209ENST00000473421 FARSAQ9Y285 508 aaKnown RBP12.36□□□□□ -0.43
TRAF4-209ENST00000473421 SPO11Q9Y5K1 396 aa12.36□□□□□ -0.43
TRAF4-209ENST00000473421 ABCA12Q86UK0 2595 aa12.35□□□□□ -0.43
TRAF4-209ENST00000473421 MDC1Q14676 2089 aaKnown RBP12.35□□□□□ -0.43
TRAF4-209ENST00000473421 KMOO15229 486 aa12.35□□□□□ -0.43
TRAF4-209ENST00000473421 CAPN1P07384 714 aa12.35□□□□□ -0.43
TRAF4-209ENST00000473421 CCNCP24863 283 aa12.35□□□□□ -0.43
TRAF4-209ENST00000473421 SERPINB6P35237 376 aa12.35□□□□□ -0.43
TRAF4-209ENST00000473421 GJC1P36383 396 aa12.35□□□□□ -0.43
TRAF4-209ENST00000473421 ARCN1P48444 511 aaKnown RBP12.35□□□□□ -0.43
TRAF4-209ENST00000473421 TAS2R40P59535 323 aa12.35□□□□□ -0.43
TRAF4-209ENST00000473421 MYL5Q02045 173 aa12.35□□□□□ -0.43
TRAF4-209ENST00000473421 KRT81Q14533 505 aa12.35□□□□□ -0.43
TRAF4-209ENST00000473421 NOMO1Q15155 1222 aa12.35□□□□□ -0.43
TRAF4-209ENST00000473421 NR6A1Q15406 480 aa12.35□□□□□ -0.43
TRAF4-209ENST00000473421 PLEKHN1Q494U1 663 aaPredicted RBP12.35□□□□□ -0.43
TRAF4-209ENST00000473421 PLEKHS1Q5SXH7 462 aa12.35□□□□□ -0.43
TRAF4-209ENST00000473421 SYVN1Q86TM6 617 aa12.35□□□□□ -0.43
TRAF4-209ENST00000473421 LRRTM4Q86VH4 590 aa12.35□□□□□ -0.43
TRAF4-209ENST00000473421 RAVER1Q8IY67 606 aaKnown RBP12.35□□□□□ -0.43
TRAF4-209ENST00000473421 CCHCR1Q8TD31 782 aa12.35□□□□□ -0.43
TRAF4-209ENST00000473421 THAP4Q8WY91 577 aa12.35□□□□□ -0.43
TRAF4-209ENST00000473421 MR1Q95460 341 aa12.35□□□□□ -0.43
TRAF4-209ENST00000473421 CXorf40BQ96DE9 158 aa12.35□□□□□ -0.43
TRAF4-209ENST00000473421 SNRNP40Q96DI7 357 aaKnown RBP12.35□□□□□ -0.43
TRAF4-209ENST00000473421 ZDHHC12Q96GR4 267 aa12.35□□□□□ -0.43
TRAF4-209ENST00000473421 TIMM29Q9BSF4 260 aa12.35□□□□□ -0.43
TRAF4-209ENST00000473421 GPR87Q9BY21 358 aa12.35□□□□□ -0.43
TRAF4-209ENST00000473421 RAB33BQ9H082 229 aa12.35□□□□□ -0.43
TRAF4-209ENST00000473421 ZFYVE1Q9HBF4 777 aa12.35□□□□□ -0.43
TRAF4-209ENST00000473421 BPIFA1Q9NP55 256 aa12.35□□□□□ -0.43
TRAF4-209ENST00000473421 LMBRD1Q9NUN5 540 aa12.35□□□□□ -0.43
TRAF4-209ENST00000473421 CFAP20Q9Y6A4 193 aaKnown RBP12.35□□□□□ -0.43
TRAF4-209ENST00000473421 SCINQ9Y6U3 715 aa12.35□□□□□ -0.43
TRAF4-209ENST00000473421 CROCCQ5TZA2 2017 aa12.35□□□□□ -0.43
TRAF4-209ENST00000473421 PIKFYVEQ9Y2I7 2098 aa12.34□□□□□ -0.43
TRAF4-209ENST00000473421 CCDC88CQ9P219 2028 aa12.34□□□□□ -0.43
TRAF4-209ENST00000473421 RGSL1A5PLK6 1076 aa12.34□□□□□ -0.43
TRAF4-209ENST00000473421 ENO4A6NNW6 628 aa12.34□□□□□ -0.43
TRAF4-209ENST00000473421 MTA2O94776 668 aa12.34□□□□□ -0.43
TRAF4-209ENST00000473421 CDK14O94921 469 aa12.34□□□□□ -0.43
TRAF4-209ENST00000473421 CBX6O95503 412 aa12.34□□□□□ -0.43
TRAF4-209ENST00000473421 CCDC172P0C7W6 258 aa12.34□□□□□ -0.43
TRAF4-209ENST00000473421 PRF1P14222 555 aa12.34□□□□□ -0.43
TRAF4-209ENST00000473421 CDK11BP21127 795 aaKnown RBP12.34□□□□□ -0.43
TRAF4-209ENST00000473421 FECHP22830 423 aa12.34□□□□□ -0.43
TRAF4-209ENST00000473421 PRKCIP41743 596 aa12.34□□□□□ -0.43
TRAF4-209ENST00000473421 CTSCP53634 463 aa12.34□□□□□ -0.43
TRAF4-209ENST00000473421 FOXL2P58012 376 aa12.34□□□□□ -0.43
TRAF4-209ENST00000473421 ABRQ12979 859 aa12.34□□□□□ -0.43
TRAF4-209ENST00000473421 PIGHQ14442 188 aaPredicted RBP12.34□□□□□ -0.43
TRAF4-209ENST00000473421 RPE65Q16518 533 aa12.34□□□□□ -0.43
TRAF4-209ENST00000473421 IFI16Q16666 785 aaKnown RBP12.34□□□□□ -0.43
TRAF4-209ENST00000473421 ATP13A5Q4VNC0 1218 aa12.34□□□□□ -0.43
TRAF4-209ENST00000473421 CCDC122Q5T0U0 273 aa12.34□□□□□ -0.43
TRAF4-209ENST00000473421 AGAP9Q5VTM2 703 aa12.34□□□□□ -0.43
TRAF4-209ENST00000473421 C1QL3Q5VWW1 255 aa12.34□□□□□ -0.43
TRAF4-209ENST00000473421 DUS1LQ6P1R4 473 aaKnown RBP12.34□□□□□ -0.43
TRAF4-209ENST00000473421 WASH2PQ6VEQ5 465 aa12.34□□□□□ -0.43
TRAF4-209ENST00000473421 LRRC49Q8IUZ0 686 aa12.34□□□□□ -0.43
TRAF4-209ENST00000473421 SRRM1Q8IYB3 904 aaKnown RBP12.34□□□□□ -0.43
TRAF4-209ENST00000473421 TRAM1L1Q8N609 369 aa12.34□□□□□ -0.43
TRAF4-209ENST00000473421 ZBTB2Q8N680 514 aa12.34□□□□□ -0.43
TRAF4-209ENST00000473421 NIPA2Q8N8Q9 360 aa12.34□□□□□ -0.43
TRAF4-209ENST00000473421 AVL9Q8NBF6 648 aa12.34□□□□□ -0.43
TRAF4-209ENST00000473421 FATE1Q969F0 183 aa12.34□□□□□ -0.43
TRAF4-209ENST00000473421 ZNF501Q96CX3 271 aaPredicted RBP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms